BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930287
Length=3115
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22910.1 | Symbols: | ATPase E1-E2 type family protein / ha... 4783 0.0
> AT3G22910.1 | Symbols: | ATPase E1-E2 type family protein /
haloacid dehalogenase-like hydrolase family protein | chr3:8116335-8119388
REVERSE LENGTH=3054
Length=3054
Score = 4783 bits (2590), Expect = 0.0
Identities = 2913/3070 (95%), Gaps = 17/3070 (1%)
Strand=Plus/Plus
Query 27 ATGCGAAGAAACGTTTCTGATCATGCAGAGAAGAAGAACAAGGTAGGCGTTGAGGTTCTT 86
||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 1 ATGCGGAGAAACGTATCTGATCATGCAGAGAAGAAGGACAAGGTGGGCGTTGAGGTTCTT 60
Query 87 CTGGAACTTCCCAAAACCCTAAGCAAATCAAACAAGAAATGGCAATTAGCATTCATCAAG 146
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 61 CTGGAACTTCCCAAAACCCTAAGCAAATCAAACAAAAAATGGCAATTAGCATTGATCAAG 120
Query 147 ATCTACTGTTCAAGAACTCTCCTCAATTGCGCTAAACACGCTATCCGAAAACCCGGTTTG 206
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 121 CTCTACTGTTCAAGAACTCTCCTCAATTGCGCCAAACACGCTATCCGAAAACCCGGTTTG 180
Query 207 TTCCCTCGTTCTCTTTCCTACACCGCCATTAATCTTGATCACCATCAAGATGATCATCAT 266
||||||||||||||||| |||||||||||| |||||||| || | ||||||
Sbjct 181 TTCCCTCGTTCTCTTTCATACACCGCCATTGATCTTGAT---CA-C--------CATCAT 228
Query 267 GGAGATGATCACTTCAAGATTGATACTGAAACCTTAAACGATCTCGTCAAGAACAAGAAC 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 229 GGAGATGATCACTTCAAGATTGATACTGAAACCTTAAACGATCTCGTCAAGAACAAGAAC 288
Query 327 CAAGAGAAACTTGAGTCTCTTGGTGGTCCTAATGGTTTAGTCTCGGCTCTTAAGACTAAC 386
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||| ||||
Sbjct 289 CAAGAGAAACTTGAGTCTCTTGGTGGTCCTAATGGCTTAGTCTCAGCTCTCAAGAGTAAC 348
Query 387 ACACGTCTCGGTATCAACGAAGAAGGTGATGAGATTCAACGTAGACGTTCGACGTTCGGG 446
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 349 ACACGTCTCGGGATCAACGAAGAAGGTGATGAGATTCAACGTAGACGTTCAACGTTCGGG 408
Query 447 TCTAATACTTACACGAGACAACCATCGAAGAGTCTCTTCTATTTTGTAGTGGAAGCTTTC 506
|| || |||||||| ||||||||||||||| |||| ||| ||||||| ||||||||||||
Sbjct 409 TCCAACACTTACACAAGACAACCATCGAAGGGTCTTTTCCATTTTGTGGTGGAAGCTTTC 468
Query 507 AAGGACCTAACGATTCTTATCCTTCTCGGTTGCGCAACACTCTCTCTCGGGTTTGGTATC 566
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 469 AAGGACTTAACGATTCTTATCCTTCTCGGTTGCGCAACGCTCTCTCTCGGGTTTGGTATC 528
Query 567 AAAGAGCATGGTTTGAAAGAAGGATGGTACGATGGAGGAAGTATATTCGTAGCGGTTTTC 626
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 529 AAAGAGCATGGATTAAAAGAAGGATGGTACGATGGAGGAAGTATATTCGTAGCGGTTTTC 588
Query 627 TTGGTGGTAGCTGTCTCTGCGGTCAGTAACTTCAGACAGAACAGACAGTTCGATAAACTT 686
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 589 TTGGTGGTAGCTGTCTCTGCGGTCAGCAACTTCAGACAGAACAGACAGTTTGATAAACTC 648
Query 687 TCTAAAGTAAGTAGTAACATCAAGATCGATGTTGTTAGAAACGGACGTCGGCAAGAGATT 746
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 649 TCTAAAGTAAGTAGTAACATTAAGATCGATGTTGTTAGAAACGGACGTCGTCAAGAGATT 708
Query 747 TCGATCTTTGACATTGTCGTTGGAGATATCGTTTGTTTGAACATCGGAGATCAAGTTCCA 806
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 709 TCGATCTTTGATATTGTCGTTGGAGATATCGTTTGTTTGAACATCGGAGATCAAGTTCCA 768
Query 807 GCGGATGGAGTGTTCGTTGAAGGACATCTGTTGCACGTTGATGAATCAAGTATGACCGGA 866
|| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||| |||
Sbjct 769 GCTGATGGAGTGTTCGTTGAAGGACATTTGTTACACGTTGATGAATCAAGCATGACTGGA 828
Query 867 GAAAGCGATCATGTCGAGGTTAGCTTATCCGGAAACACATTCTTGTTTTCGGGGACTAAG 926
|||||||||||||||||||||||| || ||||||||||||| ||||| || ||||||||
Sbjct 829 GAAAGCGATCATGTCGAGGTTAGCCTAACCGGAAACACATTTTTGTTCTCCGGGACTAAA 888
Query 927 ATCGCTGATGGGTTCGGTAAAATGGCGGTTACTTCCGTTGGGATGAACACAGCTTGGGGA 986
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATAGCTGATGGGTTCGGTAAAATGGCGGTTACTTCCGTTGGGATGAACACAGCTTGGGGA 948
Query 987 CAAATGATGAGTCATATCTCTCGTGACACGAACGAGCAAACTCCATTGCAATCTCGTCTC 1046
|||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||||
Sbjct 949 CAAATGATGAGTCATATCTCGCGTGACACTAACGAGCAAACTCCGTTGCAGTCTCGTCTC 1008
Query 1047 GATAAGCTTACTTCTTCCATAGGTAAAGTTGGTTTACTTGTAGCTTTCTTGGTTCTTTTG 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 GATAAGCTTACTTCTTCCATAGGTAAAGTTGGTTTACTTGTAGCTTTCTTGGTTCTTTTG 1068
Query 1107 GTTCTGTTAATTCGTTATTTCACGGGAACCACGAAAGACGAGAGCGGAAACCGTGAGTAT 1166
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 GTTCTGTTAATTCGTTACTTCACGGGAACCACGAAAGACGAGAGCGGAAACCGTGAGTAT 1128
Query 1167 AACGGAAAGAAGACAAAGAGCGATGAAATCGTGAATGCAGTGGTTAAGATGGTTGCAGCT 1226
|||||||||| || ||||||||||| || ||||| || |||||||||||||||||||||
Sbjct 1129 AACGGAAAGACTACGAAGAGCGATGAGATAGTGAACGCTGTGGTTAAGATGGTTGCAGCT 1188
Query 1227 GCGGTTACAATCATCGTAGTTGCGATACCTGAAGGATTGCCATTAGCTGTGACATTGACA 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1189 GCGGTTACAATCATCGTAGTTGCGATACCTGAAGGATTGCCATTAGCTGTGACATTGACA 1248
Query 1287 TTGGCGTATTCAATGAAGAGGATGATGAAAGATAATGCTATGGTGAGAAAGCTCTCTGCT 1346
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1249 TTGGCGTATTCAATGAAGAGAATGATGAAAGATAATGCTATGGTGAGAAAGCTCTCTGCT 1308
Query 1347 TGTGAGACAATGGGCTCTGCAACGGTTATTTGTACCGATAAAACCGGTACTTTGACGCTT 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 TGTGAGACAATGGGCTCTGCAACGGTTATTTGTACCGATAAAACCGGTACTTTGACGCTT 1368
Query 1407 AACCAAATGAAGGTAACTGATTTCTGGTTCGGTCTCGAGTCAGGAAAAGCTTCTTCTGTG 1466
||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1369 AACCAGATGAAGGTAACCGATTTCTGGTTCGGTCTCGAATCAGGAAAAGCTTCTTCTGTG 1428
Query 1467 TCTCAGAAAGTTGTTGAATTGTTTCATCAAGGAGTTGCAATGAACACTACAGGGAGTGTG 1526
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1429 TCTCAGAGAGTTGTTGAATTGTTTCATCAAGGAGTTGCAATGAACACTACAGGGAGTGTG 1488
Query 1527 TTTAAGGCTAAAGCAGGAACAGAGTATGAGTTCTCCGGTAGTCCAACGGAGAAAGCGATT 1586
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 1489 TTTAAGGCTAAAGCAGGAACAGAGTATGAGTTCTCTGGTTCTCCAACGGAGAAAGCGATT 1548
Query 1587 CTTAGCTGGGCGGTTGAGGAATTGAACATGGATATGGAGGAAGTGATTGAAGAACACAAT 1646
||||||||||||||||||||| || | |||| ||||||| |||||||||||||||| ||
Sbjct 1549 CTTAGCTGGGCGGTTGAGGAACTGGAGATGGGTATGGAGAAAGTGATTGAAGAACATGAT 1608
Query 1647 GTTGTTCATGTGGAAGGTTTCAATTCAGAGAAGAAGAGAAGTGGTGTGTTGATAAAAAAG 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 1609 GTTGTTCATGTGGAAGGTTTCAATTCAGAGAAGAAGAGAAGTGGTGTGTTGATGAAGAAG 1668
Query 1707 AAGAATGGAGAAAACACAGAGAACAATGTTGTTCATTGGAAAGGAGCTGCTGAGAAGATT 1766
|| | || | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1669 AA-A--GGCGTAAACACAGAGAACAATGTTGTTCATTGGAAAGGAGCTGCTGAGAAGATT 1725
Query 1767 CTAGCTATGTGTTCAACGTTCTACGATGGTTCTGGAGTTGTGAGAGAGATGAAAGAAGAT 1826
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1726 CTAGCTATGTGTTCAACGTTCTGTGATGGTTCTGGAGTTGTGAGAGAGATGAAAGAAGAT 1785
Query 1827 GATAAGATTCAGTTCGAGAAGATTATTCAATCTATGGCAGCTAAATCTCTTCGTTGCATC 1886
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1786 GATAAGATTCAGTTTGAGAAGATTATTCAATCTATGGCAGCTAAATCTCTCCGTTGCATC 1845
Query 1887 GCCTTTGCGTATTCAGAAGACAATGAAGATATCAAGAAGTTGAAAGAAGAGAACTTGAGC 1946
|||||||||||||||||||||||||| || | ||||||||||||||||||||| ||||||
Sbjct 1846 GCCTTTGCGTATTCAGAAGACAATGAGGACAACAAGAAGTTGAAAGAAGAGAAGTTGAGC 1905
Query 1947 TTACTTGGGATTATTGGAATCAAAGATCCTTGTAGACCTGGAGTGAAGAAAGCTGTTGAG 2006
||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1906 TTACTTGGGATCATTGGAATCAAAGATCCGTGTAGACCAGGAGTGAAGAAAGCTGTTGAG 1965
Query 2007 GATTGTCAATTCGCCGGTGTGAACATCAAGATGATCACTGGAGATAACATTTTCACGGCG 2066
|||||||||||||||||||| |||||||| |||||||| || ||||||||||||||||||
Sbjct 1966 GATTGTCAATTCGCCGGTGTAAACATCAAAATGATCACCGGGGATAACATTTTCACGGCG 2025
Query 2067 AGAGCAATCGCTGTAGAGTGTGGGATCTTGACACCTGAAGATGAGATGAACAGAGAAGCT 2126
|||||||| ||||| |||||||| |||||||||||||||||||||||||| || ||||||
Sbjct 2026 AGAGCAATAGCTGTTGAGTGTGGAATCTTGACACCTGAAGATGAGATGAATAGTGAAGCT 2085
Query 2127 GTGTTAGAAGGAGAAGAGTTTCGAAACTACACTCAAGAAGAAAGGTTAAAGAAAGTCGAA 2186
||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 2086 GTGTTAGAAGGAGAAAAGTTTCGAAACTACACTCAAGAAGAAAGATTAGAGAAAGTCGAA 2145
Query 2187 AGAATCAAAGTAATGGCGAGATCTTCACCGTTTGATAAGCTTCTAATGGTGAAATGTCTC 2246
||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2146 AGAATCAAAGTGATGGCGAGATCTTCACCCTTTGATAAGCTTCTTATGGTGAAATGTCTC 2205
Query 2247 AAGGAGTTAGGCCATGTTGTGGCGGTTACTGGAGACGGGACCAACGATGCACCAGCGTTG 2306
||||||||||| ||||| ||||||||||||||||| || || ||||||||||||||||||
Sbjct 2206 AAGGAGTTAGGTCATGTGGTGGCGGTTACTGGAGATGGTACTAACGATGCACCAGCGTTG 2265
Query 2307 AAAGAAGCTGATATTGGACTTTCTATGGGGATTCAAGGCACAGAAGTTGCGAAAGAGAGC 2366
|||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||
Sbjct 2266 AAAGAAGCTGATATTGGACTTTCTATGGGGATTCAAGGTACGGAAGTAGCGAAAGAGAGC 2325
Query 2367 TCTGATATTGTGATTCTTGACGATAACTTCGCCTCTGTTGCAACGGTTTTGAAATGGGGA 2426
|| ||||| |||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 2326 TCAGATATCGTGATTCTTGACGATAACTTTGCTTCTGTTGCAACGGTTTTGAAATGGGGA 2385
Query 2427 AGATGCGTGTACAACAATATTCAGAAGTTCATTCAGTTTCAGCTCACTGTCAATGTGGCT 2486
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 2386 AGATGCGTGTACAACAATATTCAGAAGTTTATTCAGTTTCAGCTCACTGTCAATGTAGCT 2445
Query 2487 GCTCTAGTGATCAACTTCGTGGCTGCAGTTTCAGCCGGAGACGTTCCTTTGACAGCGGTT 2546
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2446 GCTCTAGTGATCAACTTCGTGGCTGCAGTTTCAGCTGGAGACGTTCCTTTGACAGCGGTT 2505
Query 2547 CAGTTACTGTGGGTTAATCTGATCATGGACACACTCGGTGCATTGGCTCTAGCTACAGAG 2606
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2506 CAGTTACTGTGGGTTAATCTGATCATGGACACACTCGGTGCATTGGCTTTAGCTACAGAG 2565
Query 2607 AAACCAACAAATGATCTGATGAAGAAGAAACCAATAGGGAGAGTCGCGCCATTGATCACA 2666
|| |||||||| ||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct 2566 AAGCCAACAAACGATCTTATGAAGAAGAAACCGATAGGGAGAGTGGCGCCATTGATCACA 2625
Query 2667 AACATCATGTGGAGGAATCTACTAGCTCAATCGTTTTATCAGATCTCTGTGCTCTTGGTG 2726
|||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||
Sbjct 2626 AACATCATGTGGAGGAATCTACTAGCTCAAGCGTTTTACCAAATCTCTGTGCTCTTGGTG 2685
Query 2727 CTTCAGTTTAGAGGAAGGTCGATTTTCGACGTGACTGAGAAAGTGAAGAACACTTTGATC 2786
||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2686 CTTCAGTTTAGAGGAAGATCGATTTTCAACGTGACTGAGAAAGTGAAGAACACTTTGATC 2745
Query 2787 TTCAATACCTTTGTGCTTTGTCAGGTGTTCAACGAGTTTAACGCCAGGAGTTTGGAGAAG 2846
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2746 TTCAATACATTTGTGCTTTGTCAGGTGTTCAACGAGTTTAACGCTAGGAGTTTGGAGAAG 2805
Query 2847 AAGAATGTGTTCAA-GGGCTTACACAAGAACAGGCTCTTCATTGGGATTATAGTTGTGAC 2905
||||||||||| || ||| |||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2806 AAGAATGTGTTTAAAGGG-TTACACAAGAACAGACTCTTCATTGGAATTATAGTTGTGAC 2864
Query 2906 TGTGGTTTTGCAAGTTGTAATGGTTGAGTTTCTCAAGAGATTTGCTGATACAGAGAGGCT 2965
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2865 TGTGGTTTTGCAAGTTGTGATGGTTGAGTTTCTCAAGAGATTTGCTGATACAGAGAGGCT 2924
Query 2966 AAATTTGGGTCAATGGGGAGTTTGCATTGCGATTGCGGCTGCGTCGTGGCCGATTGGATG 3025
||| |||||||||||||||||||||||||| || || ||||| |||||||||||||||||
Sbjct 2925 AAACTTGGGTCAATGGGGAGTTTGCATTGCCATCGCAGCTGCATCGTGGCCGATTGGATG 2984
Query 3026 GTTAGTGAAGTCTGTTCCAGTTCCAGAGAGACACTTCTTTAGCTACCTGAAATGGAAGAA 3085
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2985 GTTAGTGAAGTCTGTTCCGGTTCCAGAGAGACACTTCTTTAGCTACCTGAAATGGAAGAA 3044
Query 3086 GAGATCATGA 3095
||||||||||
Sbjct 3045 GAGATCATGA 3054
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154915519984
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5