BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930304 Length=232 Score E Sequences producing significant alignments: (Bits) Value AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 303 3e-82 > AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:8177215-8179743 REVERSE LENGTH=2529 Length=2529 Score = 303 bits (164), Expect = 3e-82 Identities = 209/231 (90%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 3 GAAACATCAATGGTGAGAAAAATGGAAGCTATATTCGAAAGCATGAAACAGAGAAGAGAA 62 |||| ||| |||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct 2083 GAAAGATCGATGGTGAGAAAAGCAGAAGCTATATTCGATAGCATGAAACAGAGAGGAGAA 2142 Query 63 GCAAACGAGTTCACCTTCGGGATGATGTTATGTATGTACAAGAAGAATGGAAGGTTCGAA 122 ||||||||||| ||||| | ||||||||||||||||||||||||||| || |||| ||| Sbjct 2143 GCAAACGAGTTTACCTTTGCGATGATGTTATGTATGTACAAGAAGAACGGTCGGTTTGAA 2202 Query 123 GAAGCGACTCATATAGCAAAACAGATGAGAGAGATGAAGATTCGAACTGATCCGTTGAGT 182 ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2203 GAAGCGACTCAGATAGCAAAACAGATGAGAGAGATGAAGATTCTAACTGATCCGTTGAGC 2262 Query 183 TACAACA-CGTTCTCGTTTTATACGCTTTAGACGGAAGATTCAAAGAAGCT 232 ||||||| |||||||| |||| |||||||||||| ||||||||||||||| Sbjct 2263 TACAACAGCGTTCTCGGCTTATTCGCTTTAGACGGGAGATTCAAAGAAGCT 2313 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10455691792 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5