BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg930397

Length=206
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G23637.1 | Symbols: DVL21 | DVL family protein | chr3:849972...   265    1e-70


> AT3G23637.1 | Symbols: DVL21 | DVL family protein | chr3:8499727-8499888 
REVERSE LENGTH=162
Length=162

 Score =  265 bits (143),  Expect = 1e-70
 Identities = 153/158 (97%), Gaps = 0/158 (0%)
 Strand=Plus/Plus

Query  23   ATGTTGGTATCCAACATATCTGGAAAATTGATGAGTCAGTTGATGGAAAAGATGAAAGAG  82
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGTTGGTATCCAACATATCTGGAAAATTGATGAGTCAGTTGATGGAAAAGATGAAAGAG  60

Query  83   AGGCTGGAGAAGATGAGGAGGACAGTGAGACAACAGAGAGCAAAGCTTCATATCATCAGA  142
            ||| |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||
Sbjct  61   AGGTTGGAGAAGATGAAGAGGACAGTGAGGCAACAAAGAGCAAAGCTTCATATCATCAGA  120

Query  143  ATTTGCATCACTATGCTTCTTTCTTCCGATGATAACTC  180
            ||||||||||||||||||||||||||||||||| ||||
Sbjct  121  ATTTGCATCACTATGCTTCTTTCTTCCGATGATTACTC  158



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9205147233


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5