BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930411
Length=1141
Score E
Sequences producing significant alignments: (Bits) Value
AT3G23685.1 | Symbols: | F-box associated ubiquitination effec... 939 0.0
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 863 0.0
AT3G25090.1 | Symbols: | F-box associated ubiquitination effec... 728 0.0
AT5G41494.1 | Symbols: | pseudogene of F-box family protein | ... 374 1e-102
AT4G09143.1 | Symbols: | pseudogene, type 2 peroxiredoxin -rel... 322 5e-87
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 320 2e-86
AT3G04250.1 | Symbols: | F-box associated ubiquitination effec... 289 5e-77
AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol ... 272 5e-72
AT5G41490.1 | Symbols: | F-box associated ubiquitination effec... 228 1e-58
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 202 7e-51
AT4G10740.1 | Symbols: | F-box and associated interaction doma... 176 4e-43
AT5G60560.1 | Symbols: | F-box and associated interaction doma... 69.4 7e-11
AT3G22770.1 | Symbols: | F-box associated ubiquitination effec... 67.6 3e-10
AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | ch... 62.1 1e-08
> AT3G23685.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8527239-8528317 FORWARD LENGTH=993
Length=993
Score = 939 bits (508), Expect = 0.0
Identities = 661/734 (90%), Gaps = 14/734 (2%)
Strand=Plus/Plus
Query 45 GCATCAAAGGAAGGTGAGTCTCAGATGATCGTGATGATGGGTAACAATCTTTATTTAACG 104
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 19 GCAGCAAAGGAAGGTGAGTCTCAGATGATCGTGATGATGGGTAACAATCTTTCTTTAACG 78
Query 105 AGCATTACTCTCAATGGAGAACCATCTATTGAGCA-AATA-GACAAACTTACTTGCCTTG 162
|| |||| |||||||||||| |||||||| ||||| || | || |||||| |||||||||
Sbjct 79 AGTATTATTCTCAATGGAGATCCATCTATAGAGCATAA-AGGA-AAACTTCCTTGCCTTG 136
Query 163 ACGAACAAGCCAAGATATCACAGGTCTTTGACTGCGAGGGCTTATTGCTATGCATATTGA 222
||||||||| ||||||||| ||| ||| | |||||||||||||| |||||||||| || |
Sbjct 137 ACGAACAAGTCAAGATATCTCAGTTCTATCACTGCGAGGGCTTACTGCTATGCATTTTAA 196
Query 223 AAGAAGATTCTAGGTTTGTGGTTCTG-AATCCGTATTTGGGGCAAACAAGGTGGATCGAA 281
|||| |||||||||||||||||| || ||||||||||||| |||||||||||||||||||
Sbjct 197 AAGATGATTCTAGGTTTGTGGTT-TGTAATCCGTATTTGGAGCAAACAAGGTGGATCGAA 255
Query 282 CCAAGATATTCCCATCGTCCATACGGATGTGACAGGTT-TAGTTATGCTCTCGGATACGT 340
||||||||||||||||||||| ||||||| || ||||| | ||| ||||| ||||||||
Sbjct 256 CCAAGATATTCCCATCGTCCACACGGATGGGATAGGTTCT-CTTACGCTCTTGGATACGT 314
Query 341 GAATAAGGAATCTTGTCG-TAGCTACAAGTTATTGAGGTTTATAGATTATTTCTACAATG 399
||||| ||| |||||| | || ||||||||| ||| |||| |||||||||| ||||||||
Sbjct 315 GAATACGGATTCTTGTTGTTA-CTACAAGTTGTTGGGGTTGATAGATTATTACTACAATG 373
Query 400 TACCCGAAAAGCAGTTCTTTTGGTATGAAATCTATGATTTTGACTCTGATTTATGGACGA 459
|| ||| ||||| ||||||||||||| |||||| ||||||||||||||||||||||| |
Sbjct 374 CACACGAGAAGCAATTCTTTTGGTATGGAATCTACGATTTTGACTCTGATTTATGGACTA 433
Query 460 CTCTTGATAT-ATCTCCACATTGGCGTATAGCATTTTGTAACCGTGGCGTTTCTCTTAAG 518
|||||||| | | |||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 434 CTCTTGATGTCA-CTCCGCATTGGCGTATAGCGTTTTGTAACCGTGGCGTTTCTCTTAAG 492
Query 519 GGAAACACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAAAGAAGTCTTGGCCAAT 578
|||| ||| |||| |||||||| ||||||||||||||||| | |||||||||||| ||
Sbjct 493 GGAAGCACGTACTGGTGTGCTGCAGAAAGGAACGTAGATGTCGATGAAGTCTTGGCCGAT 552
Query 579 AGCTTAATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTT 638
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 553 CGCTTAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTT 612
Query 639 AGTGGTGGGTATCA-TGACTATACGACATTGTCTTGTGTTAGAGAAGAGAAGCTTGCGCT 697
||||||||| || | ||||| || ||| || ||||||||||||||||||||||||||| |
Sbjct 613 AGTGGTGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGT 671
Query 698 TTTACTTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATGGATTACGACTAAGAT 757
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 672 TTTACTTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATGGATTACGACCAAGAT 731
Query 758 TGAGACTGAAGAGG 771
|||||||| |||||
Sbjct 732 TGAGACTGGAGAGG 745
Score = 272 bits (147), Expect = 5e-72
Identities = 219/253 (87%), Gaps = 7/253 (3%)
Strand=Plus/Plus
Query 855 GAGGAGAAGAAAGTCGCCATTGGTTTTGATGATGGGGATAATCGCCACACAATTAACATC 914
|||||||||||||||||| |||||||||||| | | ||| ||| | | | ||| ||
Sbjct 742 GAGGAGAAGAAAGTCGCCTTTGGTTTTGATG--GACG-TAACCGCGAGAGAGTTATTGTC 798
Query 915 ATTGGAGAGGCTGGATACTTCAGGGCATTGGATCTCGTTGGAGATTTTGGAGACCAAGAA 974
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 799 ATTGGAGAGGCTGGATACTTGAGGGGATTGGATCTCGTTGGAGATTTTGGAGACCAAGAA 858
Query 975 TGTCAG-ACAGATCTGTGCTCTTATGTTCCAAGTTTAGTGGAAATCAAGCAACCTGAAGG 1033
||| || || ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 859 TGT-AGGACTGATCTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGCAACCTGAAGG 917
Query 1034 AGGAGAAAGGGAACAAGAAAGCGAATTGGAGAAGCT-TCGATATGATGAAAACATGTCGA 1092
||| ||| | ||||| ||||||| || || ||| | |||||||||||||||||||| ||
Sbjct 918 AGGGGAATCGAAACAACAAAGCGATTTAGAAAAG-TGTCGATATGATGAAAACATGTTGA 976
Query 1093 GACTTGTCTTACT 1105
| ||||||| |||
Sbjct 977 GGCTTGTCTCACT 989
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 863 bits (467), Expect = 0.0
Identities = 558/601 (93%), Gaps = 9/601 (1%)
Strand=Plus/Plus
Query 524 CACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAAAGAAGTCTTGGCCAATAGCTT 583
||| |||| |||||||| ||||||||||||||||||| |||||||| || ||| ||||
Sbjct 114 CACGTACTGGTGTGCTGCAAAAAGGAACGTAGATGTAAATGAAGTCTTTGCTAATCGCTT 173
Query 584 AATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTGG 643
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 174 AATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGTGG 233
Query 644 TGGGTATCA-TGACTATACGACATTGTCTTGTGTTAGAGAAGAGAAGCTTGCGCTTTTAC 702
|||| || | ||||| || ||| || ||||||||||||||||||||||||||| ||||||
Sbjct 234 TGGGCAT-ATTGACTGTATGACGTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTAC 292
Query 703 TTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATGGATTACGACTAAGATTGAGA 762
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 293 TTCAGCACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGATTGAGA 352
Query 763 CTGAAGAGGTGTTGTGGAGCAAGTTCGTGAGAGTGGCAACAGCTGGATTTGATAGTTATG 822
||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 353 CTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGATTTGATAGTTATG 412
Query 823 TTCCAT-TTATAGGTGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT 881
|||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 413 TTCC-TATTATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT 471
Query 882 GATGATGGGGATAATCGCCACACAATTAACATCATTGGAGAGGCTGGATACTTCAGGGCA 941
|| ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 472 GAAGAT-GGG--AATCGCCACACAATTAACATCATTGGAGAGGCTGGATACTTGAGGGCA 528
Query 942 TTGGATCTCGTTGGAGATTTTGGAGACC-AAGAATGTCAGACAGATCTGTGCTCTTATGT 1000
||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||||||
Sbjct 529 TTGGATCTCGTTGGAGATTATGGAGACCAAAG-ATGTAAGACAGATCTGTGCTCTTATGT 587
Query 1001 TCCAAGTTTAGTGGAAATCAAGCAACCTGAAGGAGGAGAAAGGGAACAAGAAAGCGAATT 1060
||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 588 TCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAAGGGAAGAAGAAAGCGAATT 647
Query 1061 GGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTGTCTTACTTGAAGGGAATCAATG 1120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 648 GGAGAAGCTTCGATATGATGAAAACATGTCGAGACTTGTCTTACTTGAAACGAATCCATG 707
Query 1121 A 1121
|
Sbjct 708 A 708
> AT3G25090.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:9140039-9141094 REVERSE LENGTH=978
Length=978
Score = 728 bits (394), Expect = 0.0
Identities = 522/582 (90%), Gaps = 16/582 (3%)
Strand=Plus/Plus
Query 30 GGTAAAGCCTTA-CCTGCATCAAAGGAAGGTGAGTCTCAGATGATCGTGATGATGGGTAA 88
||| |||||||| || ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 10 GGTCAAGCCTTAGCC-GCAGCAAAGGAAGGTGAGTCTCAGATGATCGTGATGATGGGTAA 68
Query 89 CAATCTTTATTTAACGAGCATTACTCTCAATGGAGAACCATCTATTGAGCA-AATAG-AC 146
|||||||| |||||| ||||||| |||||||||||| |||||||| ||||| || || |
Sbjct 69 CAATCTTTCTTTAACAAGCATTATTCTCAATGGAGATCCATCTATAGAGCATAA-AGGA- 126
Query 147 AAACTTACTTGCCTTGACGAACAAGCCAAGATATCACAGGTCTTTGACTGCGAGGGCTTA 206
||||||||||||||||||||||||| ||||||||| ||| ||| | ||||||||||||||
Sbjct 127 AAACTTACTTGCCTTGACGAACAAGTCAAGATATCTCAGTTCTATCACTGCGAGGGCTTA 186
Query 207 TTGCTATGCATATTGAAAGAAGATTCTAGGTTTGTGGTTCTG-AATCCGTATTTGGGGCA 265
|||||||||| || ||||| |||||||||||||||||| || ||||||||||||| |||
Sbjct 187 CTGCTATGCATTTTAAAAGATGATTCTAGGTTTGTGGTT-TGTAATCCGTATTTGGAGCA 245
Query 266 AACAAGGTGGATCGAACCAAGATATTCCCATCGTCCATACGGA-TGTGACAGGTT-TAGT 323
||||||||||||||||||||||||||||||||||||||||||| || || ||||| | |
Sbjct 246 AACAAGGTGGATCGAACCAAGATATTCCCATCGTCCATACGGAATG-GATAGGTTCTC-T 303
Query 324 TATGCTCTCGGATACGTGAATAAGGAATCTTGTCGTAGCTACAAGTTATTGAGGTTTATA 383
|| ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||||||||
Sbjct 304 TACGCTCTTGGATACGTGAATACGGATTCTTGTCGTAGCTACAAGTTGTTGAGGTTTATA 363
Query 384 GATTATTTCTACAATGTACCCGAAAAGCAGTTCTTTTGGTATGAAATCTATGATTTTGAC 443
||||||| |||||||| |||||| ||||| ||||||||||||||| |||| |||||||||
Sbjct 364 GATTATTACTACAATGCACCCGAGAAGCAATTCTTTTGGTATGAAGTCTACGATTTTGAC 423
Query 444 TCTGATTTATGGACGACTCTTGATAT-ATCTCCACATTGGCGTATAGCATTTTGTAAC-C 501
|||||||||||||| ||||||||| | | ||||||||||||||||||| ||||||||| |
Sbjct 424 TCTGATTTATGGACTACTCTTGATGTCA-CTCCACATTGGCGTATAGCGTTTTGTAACAC 482
Query 502 GTGGCGTTTCTCTTAAGGGAAACACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAA 561
||||||| || |||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 483 -TGGCGTTCCTTTTAAGGGAAACACTTACTGGTGTGCTGCAGAAAGGAACGTAGATGTAG 541
Query 562 AAGAAGTCTTGGCCAATAGCTTAATCTGTTTCGATTTTACAA 603
| |||||||| || ||| ||||||||||||| ||||||||||
Sbjct 542 ATGAAGTCTTAGCTAATCGCTTAATCTGTTTTGATTTTACAA 583
Score = 532 bits (288), Expect = 2e-150
Identities = 374/415 (90%), Gaps = 7/415 (2%)
Strand=Plus/Plus
Query 667 TGTCTTG-TGTTAGAGAAGAGAAGCTTGCGCTTTTACTTCAGCACGATGAATCAAATCCA 725
||| ||| | ||| | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 568 TGTTTTGATTTTACAAAAGAGAAGCTTGCGGTTTTACTTCAGCACGATGAATCAAATCCA 627
Query 726 TATGAGCTTGACTTATGGATTACGACTAAGATTGAGACTGAAGAGGTGTTGTGGAGCAAG 785
|||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 628 TATGAGCTTGACTTGTGGATTACAACTAAGATTGAGACAGAAGAGGTGTTGTGGAGCAAG 687
Query 786 TTCGTGAGAGTGGCAACAGCTGGATTTGATAGTTATGTTCCATTTATAGGTGGAAGTTTC 845
||| ||||||||| ||||||||| ||| ||||||||||||| |||||| |||||||||||
Sbjct 688 TTCTTGAGAGTGGAAACAGCTGGTTTTAATAGTTATGTTCCTTTTATAAGTGGAAGTTTC 747
Query 846 TTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTTGATGATGGGGATAATCGCCACACA 905
||||||||||||||||||||||||||| ||||||||||||| | ||| ||||| | |
Sbjct 748 TTCATTGACGAGGAGAAGAAAGTCGCCTTTGGTTTTGATGAACG---TAACCGCCAGAGA 804
Query 906 ATTAACATCATTGGAGAGGCTGGATACTTCAGGGCATTGGATCTCGTTGGAGATTTTGGA 965
||| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||
Sbjct 805 GTTATTGTCATTGGAGAGGCTGGATACTTGAGGGGATTGGATCTCGTTGGGGATTTTGGA 864
Query 966 GACCAA-GAATGTCAGACAGATCTGTGCTCTTATGTTCCAAGTTTAGTGGAAATCAAGCA 1024
|||||| | ||| || ||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 865 GACCAAAGC-TGTAAGCCAGATCTATGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCA 923
Query 1025 ACCTGAAGGAGGAGAAAGGGAACAAGAAAGCGAAT-TGGAGAAGCTTCGATATGA 1078
|||||||||||| ||||||||| |||||||||||| |||||||||||||||||||
Sbjct 924 ACCTGAAGGAGGGGAAAGGGAAGAAGAAAGCGAATATGGAGAAGCTTCGATATGA 978
> AT5G41494.1 | Symbols: | pseudogene of F-box family protein
| chr5:16602589-16603438 FORWARD LENGTH=850
Length=850
Score = 374 bits (202), Expect = 1e-102
Identities = 607/791 (77%), Gaps = 73/791 (9%)
Strand=Plus/Plus
Query 275 GATCGAACCAAGATATTCCCATCGTCCATA-C-GGATGTGACAGGTTTAGTTATGCTCTC 332
|||| |||| |||||||| | || || || | || | |||| ||| |||||||||||
Sbjct 3 GATCAAACCCAGATATTCTTACCGCCCTTACCAAGA-G-GACATGTTCAGTTATGCTCTT 60
Query 333 GGATACGTGAATAAGG-AATCTTGTCGTAGC-TACAAGTTATTGAGGTTTATAGATTATT 390
||||| | |||| ||| |||||||||||| | | || || ||||||||| |||| ||||
Sbjct 61 GGATATGAGAAT-AGGAAATCTTGTCGTACCGT-TAATTTCTTGAGGTTTGTAGACTATT 118
Query 391 T-CTACAATGTACCCGAAA-AGCAGT-TCTTTT-GGTATGAAATCTATGATTTTGACTCT 446
| || ||| | || | ||| || ||| | |||| |||| |||||||| |||||||||| |
Sbjct 119 TACTTCAACG-ACTC-AAAGAG-AGTGT-TTTTGGGTACGAAATCTACGATTTTGACT-T 173
Query 447 -GATTTATGGACGACTCTTGATAT-ATCTCCACATTGGCGTATAGCATTTTGTAACCGTG 504
|||| |||||| ||||||||| | | |||||| |||| |||| || |||| ||| ||
Sbjct 174 AGATTCATGGACAACTCTTGATGTCA-GTCCACACTGGCATATAATATCTTGTGACCTTG 232
Query 505 GCGTTTCTCTTAAGGGAAACACTTACTTTTGTGC-TGCTGAAAGGAACGTAGATGTAAAA 563
|| || |||||||| ||||||||||| || || |||| | || || | | || || ||
Sbjct 233 GCATTACTCTTAAGAGAAACACTTAC---TG-GCATGCT-AGAGAAATG-A-ATTTAGAA 285
Query 564 G-AAGTCTTGGCCAAT-AGCTTAATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGC 621
| || | | | | || | | |||| ||||| ||||||||||| ||||||||| | ||||
Sbjct 286 GAAAAT-ATCGTCGATCA-CATAATATGTTTTGATTTTACAAGAGAGAGATTTAGACCGC 343
Query 622 TTCTGCCTCTGCCGTTTAGTGGT-GGG----T-ATCATGACTATACGACATTGTCTTGTG 675
|||||||||||||| |||| | | ||| | || |||| ||| ||| || ||| |||
Sbjct 344 TTCTGCCTCTGCCGGTTAGCGTTGGGGTTCATGATTATGAATATTTGACTTTATCTCGTG 403
Query 676 TTAGAGAAGAGAAGCTTG-CGCTTTTACTTCAGCACGA-TGAATCAAATCCATATGAGCT 733
|||||||||||||||||| ||| |||| |||||||| | ||||||||||||||||||||
Sbjct 404 TTAGAGAAGAGAAGCTTGCCGC-TTTATTTCAGCAC-ACCGAATCAAATCCATATGAGCT 461
Query 734 TGACTTATGGATTACGACTAAGATTGAGACTGAAGA-GGTGTTGTGGAGCAAGTTCGTGA 792
||| |||||||||| |||||||||||| ||||| | ||||| ||||||||||||| |||
Sbjct 462 TGAAATATGGATTACAACTAAGATTGAGGCTGAA-ATGGTGTCGTGGAGCAAGTTCTTGA 520
Query 793 GAGTGGCA-ACAGCTGGATTTGATAGTTAT-GTTC-CATTTATAGGTGGAAGTTT-CTTC 848
|| ||| | || | ||| ||||| | || | || || |||| ||| ||| | ||||
Sbjct 521 GAATGG-ATAC-G--GGACCTGATA-T-ATTGGTCACAACTATATGTG-AAGGATACTTC 573
Query 849 ATTGACGAGGAGAAGAAAGTCGCCATTGG-TTTTGATGATGGG-GAT-A-ATCGCCAC-A 903
|||||||||||||||||||||||||| || |||| |||| | || | || ||| |
Sbjct 574 ATTGACGAGGAGAAGAAAGTCGCCATGGGATTTTAATGAAGACAGAAGACATT-CCAAGA 632
Query 904 -CAATTAACATCATTGGAGAGGCTGGATACTTCAGGGCATTG-GATCTCGTTGGAG-ATT 960
|| ||| ||| |||||||||||||||||||| | ||| ||| | | |||| | |
Sbjct 633 ACATTTAGCATTATTGGAGAGGCTGGATACTTAATAA-ATTTAGATAT--T-GGAGTACT 688
Query 961 TTGGAGACCAAGAA-TGTCAGAC-AGATCTGTGCTCTTATGTTCCAAGTTTAGTGGAAAT 1018
| ||||| | |||| | | | || |||||||||||||||||||||| || ||||
Sbjct 689 CACAA-ACCAA-ATGTGTCGG-CTACATGTGTGCTCTTATGTTCCAAGTTTGGTCCAAAT 745
Query 1019 CAAGCAACCTG 1029
|||| ||||||
Sbjct 746 CAAGAAACCTG 756
> AT4G09143.1 | Symbols: | pseudogene, type 2 peroxiredoxin -related,
similar to type 2 peroxiredoxin, putative | chr4:5821214-5822443
FORWARD LENGTH=1230
Length=1230
Score = 322 bits (174), Expect = 5e-87
Identities = 475/609 (78%), Gaps = 66/609 (11%)
Strand=Plus/Plus
Query 198 GAGGGCTTATTGCTATGCATATTGAAAGAAGA--TT-CTA-GGTTTGTGGTTCT-GAATC 252
||||| || ||| ||||||| |||||||| || || ||| ||||| ||||| | |||||
Sbjct 313 GAGGGTTTGTTGTTATGCATCTTGAAAGACGACGTTACTAGGGTTT-TGGTT-TGGAATC 370
Query 253 CGTATTTGGGGCAAACAAGGTGGATCGAACC-AAGATATTCCCATCGTCC-ATACGGATG 310
|||||| |||||| |||||||||||| |||| ||||||| || | ||| | | ||||
Sbjct 371 CGTATTGGGGGCATACAAGGTGGATC-AACCTCCGATATTCTCAACCTCCGA-ATGGATT 428
Query 311 TGACAGGTTTAGTTATGCTCTCGGATACGTGA-ATAAGGAATCTTGTCGTAGCTACAAGT 369
||| ||||||||||||||||| ||||||| | |||||||||||||||||| || ||||
Sbjct 429 TGATAGGTTTAGTTATGCTCTTGGATACG-AAGATAAGGAATCTTGTCGTACCTTTAAGT 487
Query 370 TATTGAGGTTTATAGATTATTTCTACAATGTACCCGAAA-AGCAGTTC-TTTTGGTATGA 427
| |||||||| ||||||||||||||||| |||||||| | || || |||||||||||
Sbjct 488 TCCTGAGGTTTCTAGATTATTTCTACAATACACCCGAAACA-CA-ATCTTTTTGGTATGA 545
Query 428 AATCTATGATTTTGACTCTGATTTATGGACGACTCTTGATAT-ATCTCCACATTGGCGTA 486
|||||||||||||||||| | ||||| ||| ||||||||| | | ||||||| ||| ||
Sbjct 546 AATCTATGATTTTGACTCGGGTTTATAGACAACTCTTGATGTCA-CTCCACACTGGGGTG 604
Query 487 TAGCATT-TTGTAACC-GTGGCGTTTCTCTTAAGGGAAACACTTACTTTTGTGCTGCTGA 544
|| |||| || | || ||||||||||| |||||||||||||||||| |||||| ||
Sbjct 605 TA-CATTGTTCTT-CCAGTGGCGTTTCTATTAAGGGAAACACTTACTGGTGTGCTAAAGA 662
Query 545 AAGGAACGT-AGATG-TAAAAGAAGTCTTGGCCAATAGCTTAATCTGTTTCGATTTTACA 602
||||| || | | | | | | ||| | | | | ||| ||||||| |||||||||
Sbjct 663 AAGGAG-GTCACAGGGTCACA-AAGA-T---C-AC-A--TTA-TCTGTTTTGATTTTACA 711
Query 603 AGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTGGTGGGTATCATGACTATACG 662
|| |||||||| || |||||||| ||||| |||| || | || || ||| | |
Sbjct 712 AGAGAGAGATTCGGGCCGCTTCTCCCTCTACCGTGCAGCGCTG--TAG-ATG--T----G 762
Query 663 ACATTGTCTTGTGTTAGAGAAGAGAAGCTTGC-GCTTTTACTTCAGCACGATGAATCAAA 721
|| || |||||||||| ||||||||||||||| ||||| | |||||| | | | |
Sbjct 763 ACTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTT-ATTTCAGC--G-T---T-A-- 812
Query 722 TCCATATGAGCTTG-ACTTATGGATTACGACTAAGATTGA-GACTGAAGA-GGTGTTGTG 778
|| | ||| ||| | |||||||||||||||||||||| | | ||| | ||||| |||
Sbjct 813 TC--T--GAG-TTGGAGATATGGATTACGACTAAGATTGATGCC-GAA-ACGGTGTCGTG 865
Query 779 GAGCAAGTT 787
|||||||||
Sbjct 866 GAGCAAGTT 874
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 320 bits (173), Expect = 2e-86
Identities = 603/794 (76%), Gaps = 95/794 (12%)
Strand=Plus/Plus
Query 198 GAGGGCTTATTGCTATGCATATTGAAAGAAGATTCTAGGTTTGTGGTTCT-GAATCCGTA 256
||||| || || |||| || |||||||| | | ||||| |||||||| | |||||||||
Sbjct 313 GAGGGTTTGCTGTTATGTATTTTGAAAGACGCTACTAGGATTGTGGTT-TGGAATCCGTA 371
Query 257 TTTGGGGCAA-ACAAGGTGGAT-CGAACCAAGATATTCCCATCGTCCATACGGATGT-GA 313
|||||||||| | ||||||||| | || | |||||||| || |||||| | || ||| ||
Sbjct 372 TTTGGGGCAAGA-AAGGTGGATCCAAATC-AGATATTCTCACCGTCCACATGG-TGTAGA 428
Query 314 -CAGGTTT-AGTTATGCTCTCGGATACG-TGAATAAGGAATCTTGTCGTAGC--TACAAG 368
|| ||| | |||||| | ||||||| | | |||| ||||||||||||| || ||
Sbjct 429 CCA--TTTCAAATATGCTGTTGGATACGCCG-ACAAGGTATCTTGTCGTAGCGTTA-AA- 483
Query 369 TTATTGAGGTTTATAGATTATTTCTACAATGTACCCGA-AAAGCAGTTCTTTTGGTATGA 427
||| |||||||| ||||||||||| |||| | | |||| ||| || || |||||||||||
Sbjct 484 TTACTGAGGTTTTTAGATTATTTCCACAAAGCATCCGATAAACCA-TTTTTTTGGTATGA 542
Query 428 AATCTATGATTTTGACTC-TGATTTATGGACGACTCTTGATAT-ATCTCCACATTGGCGT 485
|||||| ||||||||||| || ||||||||| ||||||||||| | ||||||||||| ||
Sbjct 543 AATCTACGATTTTGACTCTTG-TTTATGGACAACTCTTGATATCA-CTCCACATTGGGGT 600
Query 486 ATAGCATTTTG--TAACCGTGGCGTTTCTCTTAAGGGAAACACTTACTTTTGTG-CTGCT 542
||| | || | | ||| | | ||||| |||||||||||||||||| || | |||||
Sbjct 601 ATATC--TTGGACTTACCCTAGAGTTTCCCTTAAGGGAAACACTTAC---TG-GCCTGCT 654
Query 543 GAAAGGAACGTAGATGTAAAAGAAGTCTTGGCC-A-AT-AGCTTAATCTGTTTCGATTTT 599
| || || | | | ||||| || || || | || | | |||||||||| ||||||
Sbjct 655 -AGAGAAATG-A-ACACAAAAG--GT-TT--CCAAGATCA-CATAATCTGTTTTGATTTT 705
Query 600 ACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTGG-TGGGTATCATGACTA 658
|||||||||||||||||||||||||| ||||| || | || || | | ||| | |
Sbjct 706 ACAAGTGAGAGATTTGGTCCGCTTCTACCTCTACC-T--AG-GGCTCA--AGGATGTC-A 758
Query 659 TACGACATTGTCTTGTGTTAGAGAAGAGAAGCTTGC-GCTTTTACTTCAGCAC-GA-TGA 715
| || || |||||||||| ||||||||||||||| | |||||||| ||||| | ||
Sbjct 759 TGTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAG-TTTTACTTAAGCACCGGCTGC 817
Query 716 ATCAA-AT-C---C-A-TATGAGCTTGACTTATGGATTACGACTAAGATTGA-GACTGAA 767
| || || | | | |||||| |||| |||||||||||||||||||||| | | |||
Sbjct 818 ACCACGATTCATACGAATATGAGTTTGAGATATGGATTACGACTAAGATTGACGTC-GAA 876
Query 768 GA-GGTGTTGTGGAGCAAGTTCGTGAGAGTGGCAACAGCTG-GATTTGATAGTTAT-G-T 823
| ||||| ||||||||||||| ||||| ||| | | || || | | || || | |
Sbjct 877 -ATGGTGTCGTGGAGCAAGTTCTTGAGAATGG-AT-A--TGAGACCT-A-AGATAAAGCT 929
Query 824 TCCATTTATAGGTGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTTGA 883
|||| ||| | | || || | ||||||| ||||||||||| ||| ||||||||
Sbjct 930 TCCACTTA--G-T-----TT-CTACGTTGACGAAGAGAAGAAAGTTTTCATGGGTTTTGA 980
Query 884 TGATGGGGA-TAATCGCCACACA-ATT----AACATCATTGGAGAGGCTGGATACTTCAG 937
| ||||||| || || ||| | ||| ||||||||||||||| |||||| ||| ||
Sbjct 981 TCATGGGGAATA-TC-CCA-AGTTATTTCTTAACATCATTGGAGAGACTGGATTCTTAAG 1037
Query 938 GGCATTGGATCTCG 951
|||||||||||
Sbjct 1038 AAAATTGGATCTCG 1051
> AT3G04250.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:1121950-1122828 FORWARD LENGTH=879
Length=879
Score = 289 bits (156), Expect = 5e-77
Identities = 541/719 (75%), Gaps = 57/719 (8%)
Strand=Plus/Plus
Query 401 ACCCGAAAAGCAGTTCTT-TTGGTATGAAATCTATGATTTTGACTCTGATTTATGGACGA 459
||||||||| | ||| || |||||||||||||| ||| |||| | ||||||||||| |
Sbjct 105 ACCCGAAAACCGGTT-TTCATGGTATGAAATCTACGATATTGAAACCGATTTATGGACAA 163
Query 460 CTCTTGATATATCTCCACATTGGCGTA-TAGCATTTTGTAACCGTGGCGTTTCTCTTAAG 518
|||||||| | ||||| ||||| || || | | || | | ||||| |||||||| |||
Sbjct 164 CTCTTGATGTCCCTCCATATTGG-ATAGTATCGTGTTATCAGCGTGGTGTTTCTCTCAAG 222
Query 519 GGAAACACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAA-AGAAGTCTTGGCCAA 577
||||| || |||||||||||| | |||| |||| | | |||| | || || | | |
Sbjct 223 GGAAATACCTACTTTTGTGCTACAAAAAGTAACGCA-A--TAAACA-AAATC---GACGA 275
Query 578 T-AGCTTAATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGT 636
| | | |||||||||| ||||| ||||||||||||||||| || ||| ||| ||| ||||
Sbjct 276 TCA-CATAATCTGTTTTGATTTCACAAGTGAGAGATTTGGGCCACTTTTGCGTCTACCGT 334
Query 637 TTAGTGGTGGGTATCATGACTATACGACATTGTCTTGTGTTAGAGAAGAGAAGCTTGC-G 695
|||| | ||| || |||||||| ||| || |||||||||||||||||||||||||| |
Sbjct 335 TTAGCGCTGGCCATGATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGG 394
Query 696 CTTTTACTTCA-GCACGATGAATCAAATCCATATGAGCTTGACTTATGGATTACGACTAA 754
| ||||||| | |||| | || | |||||||||||| |||| ||||||| ||||||||
Sbjct 395 C-TTTACTT-ACGCACAACGACTGGAATCCATATGAGTTTGAGATATGGATCACGACTAA 452
Query 755 GATTGAG-ACTGA-AGAGGTGTTGTGGAGCAAGTTCGT-GAGAGTGGCA-ACAGCTGGAT 810
||| ||| | ||| | | |||| |||||||||| || | || | ||| | |||| ||
Sbjct 453 GATCGAGTA-TGATA-AAGTGTCGTGGAGCAAGATCTTGGA-AATGG-ATACAGGACCAT 508
Query 811 T---TGATAGTTATG-TTCCATTTATAGGTGGAAGTTTCTTCATTGACGAGGAGAAGAAA 866
| ||| | | | || ||| |||| ||| |||||||||||||||||||||||||||
Sbjct 509 TGGCTGACA-TGCCGATTGCATATATACATGGGAGTTTCTTCATTGACGAGGAGAAGAAA 567
Query 867 GTCGCCATTGGTTTTGATGATGGGGATAATCGCCACACAATTAACATCATTGGAGAGGCT 926
||| |||| |||||| |||| | | | ||| | | |||||||||||| | ||
Sbjct 568 GTCTCCAT-GGTTTT--TGATC---A----C-C-ACAGAGTCAACATCATTGGAAAAACT 615
Query 927 GGATACTTCAGGGCATTGGATCTC-GTTGGAGATTTTGGAGACCA-AGAA-TGTCAGAC- 982
||||| || || | |||||||||| | | | || | | | | | | || ||| || |
Sbjct 616 GGATATTTTAGAGAATTGGATCTCCGA-GTACATGTAGCCGGC-ATA-AAGTGT-AGGCC 671
Query 983 AGATCTGTGCTCTTATGTTCCAAGTTTAGTGGAAATCAAGCAACCTGAAGGAGG-AGAAA 1041
| || ||||| |||| ||||||| || | || ||||||| |||||| ||||| | |||
Sbjct 672 ACATTTGTGCCCTTACGTTCCAAATTCAATGCAAATCAAACAACCTCCGGGAGGCA-AAA 730
Query 1042 GGGAACAAGAAAGCGAATTGGAGAA--GCTTCGATATGATGAAAACATGTCGAGACTTG 1098
|| ||| | ||| | | || |||| || ||||||||| ||||||||| |||| |||
Sbjct 731 GGAAACGA-AAACCCA-TTCTAGAACAGCGTCGATATGACCAAAACATGTTGAGAGTTG 787
> AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein | chr1:24571603-24573471
REVERSE LENGTH=1662
Length=1662
Score = 272 bits (147), Expect = 5e-72
Identities = 597/799 (75%), Gaps = 91/799 (11%)
Strand=Plus/Plus
Query 6 CAGAGCTTTAGGAAGATGGACATTGGTAAAGCCTTACCTGCATCAAAGG----AAGGTGA 61
|||||||||| ||||||| ||||||| |||| | | ||| ||| || |||| |
Sbjct 586 CAGAGCTTTACGAAGATGCACATTGGCAAAGAAGAAGCAGCAACAAGGGAACTAAGG-CA 644
Query 62 GTCTCAGATGATCGTGATGATGGGTAACAATCTTTATTTAACGAGCATTACTCTCAATGG 121
| ||| |||||| |||||||||| | ||||| ||||||||| | ||||| | ||||| |
Sbjct 645 GACTCGGATGATAGTGATGATGGATTACAATGTTTATTTAATGGGCATTGCAGTCAAT-G 703
Query 122 AGAA--CCATCTATTGAGCA-AATAGACAAACTTACTTGCCT---TGA--C-GAACAAGC 172
| || ||||| || ||| | ||| |||||||||||||| || | ||||| |
Sbjct 704 A-AATTCCATCCATAGAG-ACTCTAGGTAAACTTACTTGCCTAGACGATTCAGAACAGGT 761
Query 173 CAAGATATCACAGGTC-TTTGACTGCGAGGGCTTATTGCTATGCATATTGAAAGA--A-G 228
||||||||| || ||| |||| || ||||| |||||| ||||||| |||||||| | |
Sbjct 762 CAAGATATCTCAAGTCTTTTG-TTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATG 820
Query 229 ATTCTAGGTTTGTGGTTCT-GAATCCGTATTTGGGGCAAACAAGGTGGATCGAACCAAGA 287
|| ||| | |||||||| | ||||||||||||||||||||||||||||||| || |||||
Sbjct 821 ATACTAAGATTGTGGTT-TGGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACAAGA 879
Query 288 T--ATTCCCAT-CGTCCA-TACGGATGTGACAGGTTTAGTTATGCTCTCGGATACGTGAA 343
| ||| | | ||| | | ||||| || || ||| | ||||||||||||| |||
Sbjct 880 TTGATTTGC-TGCGTT-AGT--GGATG-GA-AGA---AGT-ACGCTCTCGGATACG-GAA 928
Query 344 -TAA--G-GAA------TCTTGTCGTAGCTACAAGTTATTGAGGTTTATAGATTATTTCT 393
||| | ||| |||||||||||| ||| | |||||| ||| |||| |||||
Sbjct 929 ATAATAGTGAAAACAGATCTTGTCGTAGCCCCAAAATCTTGAGGGTTACAGATAATTTCA 988
Query 394 ACAATGT-ACCCGAAAAGCAGTTCTTTTG--GTATGAAATCTATGATTTTGACTCTGATT 450
||| | | | | ||||| || | | | | ||||||||||||||||||||| ||||||
Sbjct 989 ACATTTTCAGC-GAAAA-CA-TACCTCTCCAGTATGAAATCTATGATTTTGATTCTGATG 1045
Query 451 TATGGACGACTCTTGATATATCTCCACATTGGCGTATAGCATTT-TGTAACCGTGGCGTT 509
||||||| ||||||||| | |||||||| ||| |||| || | || ||| ||||| ||
Sbjct 1046 TATGGACTACTCTTGATGTGTCTCCACACTGGTTTATA--ATGTCTG-AAC-GTGGCCTT 1101
Query 510 TCTCTTAAGGGAAACACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAAAGAAGTC 569
||||| |||||||||||||||| | || ||| |||| |||| | | | | | | ||
Sbjct 1102 TCTCTCAAGGGAAACACTTACTGG-G-GC-GCT-AAAG-AACGGC-ACGCATACGGA-TC 1154
Query 570 --TTGGCCAATAGCTTAATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGC 627
||| || || | ||||||||| ||||||||||| ||||||||||| |||||||| |
Sbjct 1155 CATTGATCA-TA--T-AATCTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTCTAC 1210
Query 628 CTCTGCCGTTTAGTGGT-GGG-TATCATGACTATACGACATTGTCTT-GTGTTAGAGAAG 684
||||||| ||||||| | ||| | || | | | || || | |||| | ||||||||||
Sbjct 1211 CTCTGCCATTTAGTGCTTGGGGTG-CAC-AGTTTGCGTCACTATCTTCG-GTTAGAGAAG 1267
Query 685 AGAAGCTTGC-GCTTTTACTTCAGCACGAT-GAATCAAATCCATATGAGCTTGA-CTTAT 741
| || | | ||||| | ||||| | || | | | | |||| ||||||| || ||
Sbjct 1268 ATAAAATCACTGCTTT-ATTTCAG-A--ATTGC--CGAG-C-ATATAAGCTTGAGCT-AT 1318
Query 742 GGATTACGACTAAGATTGA 760
|||||||||||||||||||
Sbjct 1319 GGATTACGACTAAGATTGA 1337
> AT5G41490.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr5:16600445-16601608 FORWARD LENGTH=1164
Length=1164
Score = 228 bits (123), Expect = 1e-58
Identities = 584/793 (74%), Gaps = 86/793 (11%)
Strand=Plus/Plus
Query 198 GAGGGCTTATTGCTATGCATATTGAAAGAAGATTCTAGGTTTGTGGTTCT-GAATCCGTA 256
||||| || ||| ||||| | |||||||| || ||||| |||||||| | |||||||||
Sbjct 313 GAGGGTTTGTTGTTATGCTTCTTGAAAGACCATACTAGGGTTGTGGTT-TGGAATCCGTA 371
Query 257 TTTGGGGCAAACAAGGTGGATCGAAC-CAAGATATTCCCA---T-C--GTCCATA-CGGA 308
|| ||||||||||||||| || ||| | |||||| |||| | | ||||| | | |
Sbjct 372 TTCCGGGCAAACAAGGTGGGTCAAACTC-AGATATCCCCACCCTCCAAGTCCA-AGCAAA 429
Query 309 TGTGACAGGTTTAGTTATGCTCTCGGATACGTGAAT-AAGGAATCTTGTCGTAGC--TAC 365
|| || |||| || ||||| || ||||||| | || |||| ||||||||||||| ||
Sbjct 430 TGGGATTGGTTCAGATATGCCCTTGGATACGAGGATAAAGG-ATCTTGTCGTAGCGTTA- 487
Query 366 AAGTTATTGAGGTTTATAGATTATTT--CTACAATGTACCCGAAAAGC-AGTTCTTTTGG 422
|| || || |||||| |||||||||| || || | ||| ||||| | | | ||||
Sbjct 488 AA-TTCTTAAGGTTTTTAGATTATTTACCT-GAA-GAACCAGAAAACCAAAAT-GTTTGC 543
Query 423 TATGAAATCTATGATTTTGACTCTGATTTATGGACGACTCTTGATAT-ATCTCCACATTG 481
||||||||||||||||||||||||||||||||||| ||||||||| | | || |||| |
Sbjct 544 TATGAAATCTATGATTTTGACTCTGATTTATGGACAACTCTTGATGTCA-CTTCACACTC 602
Query 482 GCGTATA-GCATT-TTGTAACCGTGGCGT-TTCTCTTAAGGGAAACACTTACTTTTGTGC 538
| | ||| | || || || | ||||||| || ||| ||||||||| |||||| ||
Sbjct 603 GTGGATATG--TTATTCTAGCTGTGGCGTGTT-TCTCAAGGGAAACGCTTACTGGCCTGT 659
Query 539 TGCTGAAAGGAACGTAGATGTAAAAG--AAGTCTTGGCCAAT-AGCTTAATCTGTTTCGA 595
|| | ||| || |||| | | ||| || | | | | | | | |||||| ||| ||
Sbjct 660 TG-T-AAA--AA-GTAGCTC-AGAAGCTAA--CATCG--A-TCA-CATAATCTATTTTGA 707
Query 596 TTTTACAAGTGAGAGATTT-GGTCCGCTTCTGCCTCTGCCGTTTAGTGGTGG-GTATCAT 653
|||||||| ||||| ||| || |||| ||| ||| | |||||| | | | | ||| |
Sbjct 708 CTTTACAAGAGAGAG-TTTCGGGCCGCCTCTACCTTTACCGTTTGGCGCTACAG-ATCGT 765
Query 654 G-AC-T--ATACGACA-TTG-TCTTGTGTTAGAGAAGAGAAGCTTGC-GCTTTTACTTCA 706
| | | ||| | | || |||||||||| ||||||||||||||| |||||| ||||
Sbjct 766 GGATATTCATATGTGAATTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGCTTTTT-TTCA 824
Query 707 GCACGATGAAT-CAAATCCATATGAGCTTGACTTATGGATTACGACTAAGATTGAGACTG 765
|||| | | | || || |||||| |||| ||||| ||||||||||||||||| | |
Sbjct 825 GCACTAC-ATTTCATATAAATATGAATTTGAGATATGGGTTACGACTAAGATTGAGGCCG 883
Query 766 AAGA-GGTGTTGTGGAGCAAGTTCGTGAGAGTGGCAACAGCTGGATTTGATAGTT-ATGT 823
|| | ||||| ||||||||| ||| ||||| ||| | | ||| | ||| | || |
Sbjct 884 AA-ATGGTGTCGTGGAGCAAATTCTTGAGAATGG-ATTTG--GGACCTAATA-TAGATAT 938
Query 824 TCCATTTATAGGTGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTTGA 883
|||| || | | ||||||||||||||||||||||||||| ||| ||||||||
Sbjct 939 TCCA---AT---T--AC-TTTCTTCATTGACGAGGAGAAGAAAGTTTTCATGGGTTTTGA 989
Query 884 TG-ATGGGGA-TAATCGCCAC-ACA---ATTAACATCATTGGAGAGGCTGGATACTTCAG 937
| || | || || || ||| | | ||||||||||| ||||||||| ||| || ||
Sbjct 990 -GCATAGAGAATA-TC-CCAAGAGATTTATTAACATCATCGGAGAGGCTAAATATTTAAG 1046
Query 938 GGCATTGGATCTC 950
||||||||||
Sbjct 1047 AAAATTGGATCTC 1059
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 202 bits (109), Expect = 7e-51
Identities = 823/1140 (72%), Gaps = 159/1140 (14%)
Strand=Plus/Plus
Query 45 GCATCAAAGGAAGGTGAGTCTCA-GATGATCGTGATGATGGGTAACAATCT-TTATTTAA 102
||| |||||||||| |||||| | |||||||||| |||||| ||| || || || | ||
Sbjct 148 GCAGCAAAGGAAGGAGAGTCT-AGGATGATCGTGTTGATGGATAAAAACCTGTT-TGCAA 205
Query 103 CGAGCAT-TACTCTCAATGG-A--G--A---A-CCATCTATTGAGCAAATAGACAAACTT 152
|||||| | || ||||||| | | | | |||||| ||||||| || ||||||
Sbjct 206 TGAGCATCTTCT-TCAATGGAATTGACATTGATCCATCTGCAGAGCAAAGAGGTAAACTT 264
Query 153 ACTTGCCT-T-----GA--C-GAACAAGCCAAGATATCACAGGTCTTTGACTGCGAGGGC 203
|||||||| | || | ||||||| ||||||||| || |||||| ||||||||||
Sbjct 265 ACTTGCCTATACGACGATTCAGAACAAGTCAAGATATCTCAAGTCTTTCACTGCGAGGGT 324
Query 204 TTATTGCTATGCATATTGAAAGAAGAT---TCTAGGT-TTGTGGTTCT-GAATCCGTATT 258
|| || |||||| | ||| |||| ||| | || || |||| ||| | ||||||||| |
Sbjct 325 TTGTTACTATGCGTCTTGGAAGACGATAAGTGTA-GTCTTGTTGTT-TGGAATCCGTA-T 381
Query 259 TGGGG-CAAACAAGGTGGATCGAACCAAGATA---TTCCCATCG-TCCA-TACGGATGTG 312
||||| |||||||||||||||||||| ||||| ||||| | | || | | | ||
Sbjct 382 TGGGGACAAACAAGGTGGATCGAACCTAGATATTTTTCCC--GGATACAGAATTGTTATG 439
Query 313 ACAGGT---T-TA-GT-TATGCTCTCGGATACGTGAATAAGGAATCTTGTCGTAGCT-AC 365
||||| | || || || ||||| |||||| ||||| || ||||||| | ||
Sbjct 440 GCAGGTACATGTACGTGTACGCTCTTGGATAC---AATAA-TAA--GAGTCGTAG-TCAC 492
Query 366 AAGTTATTGAGGTTTATAGATTATTTCTACAATGTACCCGAAAAGCAGTTCTTTTGGTAT 425
|| | ||||||||||||| | | | | || | || | | | |||||||||
Sbjct 493 AAAATCTTGAGGTTTATAG---A-TGGTGC-AT-T---CG-ATTTC-CCT-TTTTGGTAT 540
Query 426 GAAATCTATGATTTTGACTCTGATTTATGGACGACTCTTGA--TATATCTCCACATTGGC 483
|||||||| ||||||||||||||||| |||||||||||||| | || ||||||| |||
Sbjct 541 GAAATCTACGATTTTGACTCTGATTTGTGGACGACTCTTGACGT-TA-CTCCACAATGGT 598
Query 484 GTAT--A---GCAT-----T--TTG---TAACCGTGGCGTTTCTCTTAAGGGAAACACTT 528
||| | | | | ||| ||||||||| ||| |||| |||||||||||||
Sbjct 599 TTATAAATTTCCCTCCCCGTGGTTGTTATAACCGTGGTGTTACTCTCAAGGGAAACACTT 658
Query 529 ACTTTTGTGCTGCTGA-AAGGAACGT-AGA-TGTAAAAGAAGTCTTG-GC-CAAT-AGCT 582
||| |||||| | | |||||| || | | ||| | | ||| | || | |
Sbjct 659 ACTGGTGTGCT-ATAAGAAGGAA-GTCAAACACTAATTGGTTTGTTGATCTTGATCA-CA 715
Query 583 TAATCTGTTTCGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGTG 642
|||||||||| |||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 716 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGCCGTTT-GT- 773
Query 643 GTGGGTAT-CAT--G-A--C-TATACGACAT-TGTCTTGTGTTAGAGAAGAGAAGCTTGC 694
| | ||| | | | | | | | ||| | | ||||||||||||||||||||||||||
Sbjct 774 -TAGATATACGTCCGGAAGCCT-TGTGAC-TCTATCTTGTGTTAGAGAAGAGAAGCTTGC 830
Query 695 GCTTTTACTTCAGCACGATGAATCAAATCCATA-TGAGCTTGACTTATGGATTACGACTA 753
| |||| || | | || ||| | | || || |||| |||||||||||||||
Sbjct 831 GGTTTTGTTTT-G-----T-AA-CAA-TGC-TACTG---TTGAGGTATGGATTACGACTA 877
Query 754 AGATTGAGACTGA-AGAGGTGTT-GTGGAGCAAGTTCGTGAGAGTGGCAACAGCTGGATT 811
||||||||||||| | || | || ||||||||||||| ||| |||| || | || ||
Sbjct 878 AGATTGAGACTGACA-AGAT-TTCGTGGAGCAAGTTCTTGACAGTG--AATA--TGTATG 931
Query 812 TGATAGTTATGTTCCATTTATAGGTGGAAGTTTCTTCATTGACGAGG-AGAAGAAAGTCG 870
| | | | ||| | | ||| | | |||| ||||||||||||| | |||||||| |
Sbjct 932 T--T-G--ACCTTC--TGGA-AGG-G-A-GTTTTTTCATTGACGAGGTA-AAGAAAGTTG 979
Query 871 CCATTGGTTTT-GATGATGGGGAT-AATCGCCACACAATTAACATCATTGGAGAGGCTGG 928
| || | |||| ||| || ||| |||||| | ||| || ||||| | |||||||||||
Sbjct 980 CTAT-GATTTTTGAT-ATACCGATGAATCGCGAGACAGTTTACATCGTGGGAGAGGCTGG 1037
Query 929 ATAC-TTCAGGGCATTGGATCTCGTTGGAGATTTTG--GA-GACCAAGAATGT-CAG-AC 982
| || || | | | || |||| | | | ||| | ||| || | | | | ||
Sbjct 1038 AAACGTTAAAGA-ACTGCATCTAGGACAACCTGTTGATGTTGACAAACACTTTTCCCCAC 1096
Query 983 -AGATCTGTGCTCTTATGTTCCAAGTTTAGTGGAAATCAAGCAACCTGAAGGAGGAGAAA 1041
| | |||||||||||||||||||||||||| |||||||||||||| |||| | |||
Sbjct 1097 TATTTGTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTCCAGGATGCCAAA 1156
Query 1042 GGGAACAAGAAAGCGAAT-TGGAGAAGCTTCGAT---ATGATGAAAACATGTCGAGACTT 1097
|| ||||||||||| | | | || || | ||||| ||||||||||||| || ||||||
Sbjct 1157 GGAAACAAGAAAGC-AGTCTAGAAAAACGTCGATGTGATGATGAAAACATATCTAGACTT 1215
> AT4G10740.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:6617143-6618426 REVERSE LENGTH=1284
Length=1284
Score = 176 bits (95), Expect = 4e-43
Identities = 448/608 (74%), Gaps = 65/608 (11%)
Strand=Plus/Plus
Query 69 ATGATCGTGATGATGGGTAACAATC-TTTATTTAACGAGCATTACTC-TCAATGGAGAAC 126
||||| |||||||||| | |||| | ||||||||| | |||| | || |||| || |||
Sbjct 190 ATGATTGTGATGATGGATTACAA-CGTTTATTTAATGGGCATCA-TCGTCAA-CGAAAAC 246
Query 127 C-ATCTATTGAG-CAAATAGACAAACTTACTTGCCT---T-G-AC-GAACAAGCCAAGAT 178
| ||| || || | ||| |||||||||||||| | | | |||||| ||||||
Sbjct 247 CTATCCATAAAGTC-TCTAGGTAAACTTACTTGCCTACATGGTTCTAAACAAGTCAAGAT 305
Query 179 ATCACAGGTCTTTGACTGCGAGGGCTTATTGCTATGCATATTGAAAGA--A-GATTCTAG 235
||| || |||||| | || ||||| ||||| ||||||| || ||||| | ||| |||
Sbjct 306 ATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACGATGATACTAA 365
Query 236 GTTTGTGGTTCTGAATCCGTATTTGGGGCAAACAAGGTGGATCGAA-CCAAGATATTCCC 294
| |||||||| |||||||||||||||||||||||||||||||| || ||| || | | |
Sbjct 366 GATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCA-GAAAGTATC 424
Query 295 ATCGTCCA--T-AC-GG-ATGTGAC-AG--GTTTAGT---TATGCTCTCGGATACGTGAA 343
| ||| || | | || | | ||| || ||||| | ||||||||| |||||| ||
Sbjct 425 ACCGTACAAGTGAATGGGAAG-GACGAGATGTTTA-TAACTATGCTCTCCGATACGA-AA 481
Query 344 -TAAGGAATCTTGTC-GTAGCTACAAGTTATTGAGGTTTATAGATTATTTCTA-CAATGT 400
||| | | | ||||| ||| | ||||||||||||||| ||||| | ||
Sbjct 482 CTAAC-AGTGGAAACCGTAGCCCCAAAATCTTGAGGTTTATAGATGATTTCCATCACC-- 538
Query 401 ACCC-GAAAAGCA-GTTCTTTTGG-TATGAAATCTATGATTTTGACT-CTGATTTATGGA 456
|||| ||||| | | |||| | ||||||| ||| |||||||| | ||||||||||||
Sbjct 539 ACCCCGAAAACCCCG--CTTTACGATATGAAACCTACGATTTTGA-TACTGATTTATGGA 595
Query 457 CGACTCTTGATATATCTCCACATTGGCGTATAGCATTTTG-TAACCGTGGCGTTTCTCTT 515
| ||||||||| | |||||||| ||||| ||| || | | | |||| |||||||||
Sbjct 596 CTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTCGCTGTG-GTGGTGTTTCTCTT 654
Query 516 AAGGGAAACACTTACTTTTGTGCTGCTGAAAGGAACGTAGATGTAAAAG-A-AGTCTTGG 573
|| ||||||||||| || | || |||| | | |||| | | | | | | | | ||||
Sbjct 655 AATGGAAACACTTA-TTGGG-GC-GCTGTA-G-AACGAA-ACGCATCTGCATA-TATTGG 707
Query 574 CCAATAGCTTAATCTG-TTTCGATTTTACAAGTGAGAG-ATTTGGTCCGCTTCTGCCTCT 631
|| || | | |||| ||| ||||||||||| | ||| |||||| |||||| | |||||
Sbjct 708 TCA-TA--TGA-TCTGCTTT-GATTTTACAAGAG-GAGGATTTGGACCGCTTATACCTCT 761
Query 632 GCCGTTTA 639
||||||||
Sbjct 762 GCCGTTTA 769
> AT5G60560.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:24345949-24347172 FORWARD LENGTH=1125
Length=1125
Score = 69.4 bits (37), Expect = 7e-11
Identities = 48/53 (91%), Gaps = 2/53 (4%)
Strand=Plus/Plus
Query 834 GGTGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTT-TTGATG 885
||||| ||||||||||||||||||||||||||||||||| | |||| || |||
Sbjct 928 GGTGGCAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCGT-GGTTATTCATG 979
> AT3G22770.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8047684-8048667 REVERSE LENGTH=984
Length=984
Score = 67.6 bits (36), Expect = 3e-10
Identities = 42/45 (93%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 840 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTTGAT 884
|||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 799 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTTGTTTTTGAT 843
> AT3G25225.1 | Symbols: | pseudogene, hypothetical protein |
chr3:9184970-9186171 FORWARD LENGTH=1202
Length=1202
Score = 62.1 bits (33), Expect = 1e-08
Identities = 42/46 (91%), Gaps = 2/46 (4%)
Strand=Plus/Plus
Query 840 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT-GAT 884
|||||||||||||||||||||||||||||||| | |||||| |||
Sbjct 999 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGT-GGTTTTTGAT 1043
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55973607675
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5