BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg930477

Length=543
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G22590.1 | Symbols:  | UDP-Glycosyltransferase superfamily p...   265    4e-70


> AT2G22590.1 | Symbols:  | UDP-Glycosyltransferase superfamily 
protein | chr2:9592996-9594535 FORWARD LENGTH=1540
Length=1540

 Score =  265 bits (143),  Expect = 4e-70
 Identities = 179/196 (91%), Gaps = 4/196 (2%)
 Strand=Plus/Plus

Query  58    TTGTCTACGTAGGTTTTGGTTCAGAAGCTAAACCGAGTCAAACCGAGATAAATTCA-ATC  116
             |||||||||||| |||||||||||||||||||||||||||||| ||| |||||  | |||
Sbjct  864   TTGTCTACGTAGCTTTTGGTTCAGAAGCTAAACCGAGTCAAACGGAGCTAAATG-AGATC  922

Query  117   GCTCTCGGTTTAGAACTTTCCGGTTTACCTTT-TTTCTGGGTGTTAAAGACTCGCCGTGG  175
             |||||||||||||| ||||| ||||||||||| ||| ||||||||||||||||| |||||
Sbjct  923   GCTCTCGGTTTAGAGCTTTCTGGTTTACCTTTCTTT-TGGGTGTTAAAGACTCGTCGTGG  981

Query  176   TCCGTGGGATACCGAGCCGGTTGAGCTTCCGGAAGGATTCGAGGAGCGTACGGCTGAGAG  235
             ||||||||||||||| ||||| |||||||||||||||||||| |||||||| || || ||
Sbjct  982   TCCGTGGGATACCGAACCGGTCGAGCTTCCGGAAGGATTCGAAGAGCGTACAGCGGATAG  1041

Query  236   AGGGATGGTGTGGAGA  251
             ||||||||||||||||
Sbjct  1042  AGGGATGGTGTGGAGA  1057



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 26021288146


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5