BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930601 Length=409 Score E Sequences producing significant alignments: (Bits) Value AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / ... 573 4e-163 > AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1 protein (SCD1) | chr1:18139234-18148981 REVERSE LENGTH=3904 Length=3904 Score = 573 bits (310), Expect = 4e-163 Identities = 336/349 (96%), Gaps = 0/349 (0%) Strand=Plus/Plus Query 16 GCTCAAAATGGATGTTGGCCGTGCTGCTTCAAGAAGCGATTTGTCGACAGTGCGGGACGC 75 ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 2015 GCTCAAAATGGCTGTGGGCCGTGCTGCTTCAAGAAGCGATTTGTCGACAGTGCGGGATGC 2074 Query 76 ACTTGAAGTTTCTGCAGAAATGTTCAAGAAAGATGCCAATAATGTTTCAGACTATGTTCA 135 |||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| Sbjct 2075 ACTTGAAGTTTCTGCAGAAATGTTCAAGAAGGATGCCAATAATGTCTCTGACTATGTTCA 2134 Query 136 GCGTCATCTCATCTCCATATCCATCTGGGAGGAGTTGAGATTCTGGGAGGGTTACTTCGA 195 ||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| Sbjct 2135 GCGTCATCTCATCTCCATACCCATCTGGGAGGAGTTGAGATTTTGGGAAGGTTACTTCGA 2194 Query 196 GTATCTCATGGAGCAGCCTGCAAATGAATCAGTGAACTATGCTACTTTGGTCACAGCCAG 255 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2195 GTATCTCATGGAGCAGCCTGCAAATGAATCTGTGAACTATGCTACTTTGGTCACAGCCAG 2254 Query 256 GCTAATCATAGTGGCATCACATATGGCTGGCTTGGGACTTCCTGATACAGAAGCTTGGAA 315 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2255 ACTAATCATAGTGGCATCACATATGGCTGGCTTGGGACTTCCTGATACAGAAGCTTGGAA 2314 Query 316 CATGATCGAGACAATAGCAGAGAAACAAAAACTTGGATACAAATTACTG 364 |||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 2315 CATGATCGAGACAATAGCAGAGAAACAAAAGCTTGGATATAAATTACTG 2363 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19353083365 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5