BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930634 Length=664 Score E Sequences producing significant alignments: (Bits) Value AT3G25190.1 | Symbols: | Vacuolar iron transporter (VIT) famil... 708 0.0 > AT3G25190.1 | Symbols: | Vacuolar iron transporter (VIT) family protein | chr3:9174457-9175776 FORWARD LENGTH=870 Length=870 Score = 708 bits (383), Expect = 0.0 Identities = 431/454 (95%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 214 CGGGTGCTTGTAGTATGGCTATTGGAGAGTTTGTGTCTGTATGCACCCAAAGGGATATTG 273 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 278 CGGGTGCTTGTAGTATGGCTATTGGAGAGTTTGTGTCTGTGTGCACCCAAAGGGATATTG 337 Query 274 AAACTGCGCAGATGAAGAGAGCTATTGAGA-ATAAGACATCATTATCAGAAATCGACGAA 332 ||||||| |||||||||||||||||||| | ||||||||||| |||||| |||||||||| Sbjct 338 AAACTGCACAGATGAAGAGAGCTATTGA-ACATAAGACATCACTATCAGCAATCGACGAA 396 Query 333 CAAGAGGAGGAGGAGAAGAAAGAACGGCTGCCAAATCCAGGGCAAGCAGCAATTGCATCA 392 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 397 CAAGAGGAGGAGGAGAAGAAAGAAAGGCTGCCAAATCCAGGGCAAGCAGCAATTGCATCG 456 Query 393 GCGTTAGCGTTTTCTGTGGGTGCAGCAATGCCGCTTTTGGCCGCTGTATTCATAGAGAAT 452 |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 457 GCGTTAGCGTTTTCAGTGGGTGCAGCAATGCCGCTTCTGGGCGCTGTATTCATAGAGAAT 516 Query 453 CATAAGGTAAGAATGGTTGTGGTAGCGATTGTGGCCACCATAGCATTAGTTGTGTTTGGA 512 ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||| Sbjct 517 CATAAGGTAAGAATGGTGGTGGTAGCGGTTGTGGCCACCATAGCATTGGTTGTGTTTGGA 576 Query 513 GTGACCGGTGCGGTCTTGGGAAAGACAAGTGTGGCTAAGTCGAGCGTTAGAGTGGTGATT 572 ||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||| Sbjct 577 GTGACTGGTGCGGTCTTGGGAAAGACAAGTGTGGTTAAGTCGAGCGTCAGGGTGGTGATT 636 Query 573 GGTGGTTGGATGGCTATGGCTCTTACCTTTGGTCTCACTAAGTTCATTGGCTCCGCAGCC 632 |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| Sbjct 637 GGTGGTTGGATGGCTATGGCTCTTACCTTTGGTCTCACCAAGTTCATTGGCTCTGCAGCC 696 Query 633 ATGCAAATTTAGAGGCTCTTT-ATGTGGTC-TTC 664 |||||||| |||||||||||| |||||||| ||| Sbjct 697 ATGCAAATCTAGAGGCTCTTTCATGTGGTCCTTC 730 Score = 318 bits (172), Expect = 4e-86 Identities = 200/213 (94%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 1 CTTAGTACTAATTCCAAACCATGGCTTCCAACGTTCAGCTTTCAGAAACAAGCAGCCCAA 60 ||| ||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 29 CTTTGTACTAAATCCAAACCATGACTTCCAACGTTCAGCTTTCAGAAACAAACAGCCCAA 88 Query 61 GGAGTCAGAAAAACTGTCCGAGAGTAGAGAAGGAGGAAGTGGACTACATGCAGAGAGCTC 120 ||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 89 GGAATCAGAAAACCCGTCCGAGAGCAGAGAAGGAGGAAGTGGACTACATGCAGAGAGCTC 148 Query 121 AGTGGCTAAGAGCTGCCTTGCTCGATCGGAGCCAACGATGGTCTGGTCACAGTTGCTTCG 180 |||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| Sbjct 149 AGTGGCTAAGAGCTGCCTTGCT---T-GGAGCCAACGATGGTCTGGTCACAGTCGCTTCG 204 Query 181 CTAATGATGGGTGTTGGTTCTATCAAAGAAGAC 213 ||||||||||||||||||||||||||||||||| Sbjct 205 CTAATGATGGGTGTTGGTTCTATCAAAGAAGAC 237 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32099619933 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5