BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930677 Length=1195 Score E Sequences producing significant alignments: (Bits) Value AT3G25460.1 | Symbols: | F-box and associated interaction doma... 1027 0.0 AT1G25209.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylgl... 335 7e-91 AT1G24792.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylgl... 329 3e-89 AT1G25053.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylgl... 267 2e-70 AT1G24879.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylgl... 267 2e-70 AT1G25141.1 | Symbols: | F-box associated ubiquitination effec... 263 3e-69 AT3G18900.2 | Symbols: | FUNCTIONS IN: molecular_function unkn... 134 3e-30 AT3G22350.1 | Symbols: | F-box and associated interaction doma... 117 3e-25 > AT3G25460.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:9231581-9232666 REVERSE LENGTH=1086 Length=1086 Score = 1027 bits (556), Expect = 0.0 Identities = 936/1113 (84%), Gaps = 51/1113 (5%) Strand=Plus/Plus Query 23 ATGATGATGCCAGAACTTCCAAAGGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCA 82 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 1 ATGATGATGCCAGAACTTCCAGAGGATTTGTTAGTGGAGATACTCTGCCGCGTTCCGGCT 60 Query 83 ACATCTCTGAAACGATTACGATCTACTTGCAAACGATGGAACCTTTTAAAAAACGATAAG 142 |||||| ||||||||||||||||||||||||||| |||||||| |||| | ||||||||| Sbjct 61 ACATCTTTGAAACGATTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAAG 120 Query 143 AGATTCACAAGAAAACACTTCCACAAAGCCCCAAGACAATCTCTGATTCTCATGTGGAAT 202 ||||||| ||| ||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct 121 AGATTCAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAA- 179 Query 203 G-AGTTTGGGTTTTCTTCGATGAACATCAATCTACACAGAGTTTCACCTATAGAGGTCAC 261 | | ||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||| Sbjct 180 GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCAC 239 Query 262 TGGTGAACTTAACCTAATCGACCCTCATTATAGTTTAGATCA-GTTCAGGAACTCTCTAC 320 ||||||||||||||||||||||| ||||| |||||||| | | |||||||||||||| | Sbjct 240 TGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGT-ATGTTCAGGAACTCTCCAT 298 Query 321 TCTGCCACACTTCTGGCTTATTGTTATT-GTTATGCGTCTGTGACAACAACGAAGTGGAA 379 | || || ||||||||||||||||||| || | ||| | || || || | || Sbjct 299 TATGTCAAACTTCTGGCTTATTGTTATGCGTCAA-CGT--G-GAGAA-AAT----T--AA 347 Query 380 GGTACTAGGCTCGTGGTATGGAACCCGTGTACCGGTCTAACCAAGTGGATCCAACACAGA 439 |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| Sbjct 348 --TACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGA 405 Query 440 AAGCTTTGCTACATCTGTACCTATGCTCTTGGTTCTTACCAAGACAACAAATCTGGCAAT 499 | | | |||||||||| | |||||||||||| || ||||||||||| ||||| | |||| Sbjct 406 AGGATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCCGACAAT 465 Query 500 AAGAGCTACAAAATATTGAGCCGCAGGTTTTATGGTCACCAAGACCCAGAATTCGAAATT 559 || ||||||||||||||||||| | || |||||||| |||||| | ||||||||| Sbjct 466 AATAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGA----G--TTCGAAATT 519 Query 560 TATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTGCACCGAT 619 |||||||||||||| ||||||||||||| || ||||||||| |||||||| | | | Sbjct 520 TATGAGATTAACTCAAATTCATGGAGGAT--TC-TTGATGTCACTGTGGACTCCTCT--T 574 Query 620 ATGTACATTCGGAA-CGTGTCTTTGAAAGGAAAGACTTACTGGTTTGCTACAAATGAAAA 678 |||||||| | || ||| |||||||| || ||||||||||||||||||||| ||| ||| Sbjct 575 -TGTACATT-GAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAA 632 Query 679 AGAGAAACAACT-CGGCCTATTCTTAATCAGTTTTGATTATACAACAGAAAGATTTGAAC 737 || |||| | || ||||||||| ||| ||||||||||||| |||||||||||||||| Sbjct 633 TGATAAACCG-TGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAAC 691 Query 738 GTCTATGTCTACCTTATCCGCAT-CCATATCATGGTTATCAAAACGAGTCTCTATCTGTT 796 |||||||||| || |||| | || || ||| | || || | | | |||||||| ||| Sbjct 692 GTCTATGTCTTCCGTATCAG-ATTCCGTATTTTCGTAAT-A---C-A-TCTCTATCAGTT 744 Query 797 GTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGTCGAAGACAGAGATA 856 |||| ||||||||||||||| ||||||||||||| | | |||| ||||||||| ||||| Sbjct 745 GTTAAAGAAGAGAAACTTTCCGTGTTATTACAACCTTCCCTTACATCGAAGACACAGATA 804 Query 857 TGGGTGACAAATAAGATTGGTGAGACCAAAGTGTTGTCGTGGATCAAGGTCTTAGCGGTG 916 |||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||| Sbjct 805 TGGGTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTG 864 Query 917 GATTTGACGCCTGAGCCCAAATTTGACATAAAATTCTTGGTCGATGAGGAGAAGAAAGTC 976 ||||||| ||||||| |||| || ||||||||||||||||||||||||||| |||||| Sbjct 865 GATTTGAAGCCTGAGATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGTC 924 Query 977 CTCGTGTAT-ACTCAAAATAATGGATACAAAAGCCAAAGT-AT--TG-TATACATCGTTG 1031 || |||||| | |||||| || | | ||| | |||| | || ||||| |||||| Sbjct 925 CTTGTGTATGAG-CAAAATTTTGTA-ATAAACGGCAAAAACAACATGATATACGTCGTTG 982 Query 1032 GAAAGGACAACAAAGTTAGGGAAGTGGAT-TTTGGAGACGAATTCAAACCATTTTTGTTG 1090 || |||||||| ||||||||||||||| | ||| ||| || ||| |||||||| || || Sbjct 983 GAGAGGACAACGAAGTTAGGGAAGTGG-TGTTTAGAGTCGGATTAAAACCATTATTCTTT 1041 Query 1091 AATTACGTTCCAAGCTTGACTCAAATCCAGCAA 1123 |||| |||||||| ||||||||||||| |||| Sbjct 1042 TATTATGTTCCAAGTTTGACTCAAATCCGGCAA 1074 > AT1G25209.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylglucosamine deacetylase family protein/F-box protein related | chr1:8831724-8832760 FORWARD LENGTH=1037 Length=1037 Score = 335 bits (181), Expect = 7e-91 Identities = 695/929 (75%), Gaps = 92/929 (10%) Strand=Plus/Plus Query 26 ATGATGCCAGAACTTCCAAAGGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCAACA 85 |||||| | ||||||||| || |||||||||| |||||||||| ||||||||| || | Sbjct 1 ATGATGTCGGAACTTCCAGAGCATTTGTTAGAAGAGATACTCTACCGCGTTCCAGCTATG 60 Query 86 TCTCTGAAACGA-TTACGATCTACTTGCAAACGATGGAACCT-TTTAAAAAACGATAAGA 143 ||| |||||| | ||| | |||||||||||| ||||||| || |||| || |||| || Sbjct 61 TCTTTGAAAC-AGTTAGGGTCTACTTGCAAAGGATGGAA-CTGTTTATTCAAGGATAGGA 118 Query 144 GATTCACAAGAAAACACTTCCACAAA-GCCCCAAGACAATCTCTGATTCTCATGTGGAAT 202 ||||||||||||||||||| | ||| |||| ||| || | |||||||| ||||| || Sbjct 119 GATTCACAAGAAAACACTTGGATAAAGGCCCAAAG-CAGTTTCTGATTCACATGTCTAAA 177 Query 203 GAG-TTTGGGTTTTCTTCGATGAACATCAATCTACACAGAGTTTCACCTATAGAGGTCAC 261 | | || |||| | ||||||| || |||| || ||| || ||| | || ||||||| Sbjct 178 GGGCTTAGGGTACGC-TCGATGAGTGTCGATCTCCATAGACTTCCACATGTAAAGGTCAC 236 Query 262 TGGTGAACTTAACCTAATCGACCCT-CAT-T-ATAGTTTAGATC-AGTTCAGGA--ACTC 315 | |||| ||| ||||||| ||||| || | ||| || | || || ||| || | | Sbjct 237 AGTTGAATTTACCCTAATCAACCCTAAATATCCTAG-TT-G-TCTAGATCAAGATCAAT- 292 Query 316 TCTA-CTCTGCCACACT-TCTGGCT--TATTG-TTATTGTTATGCGTCTGTGACAACAAC 370 || | | | | | | ||| || | | ||||||||||||||||| | || ||| Sbjct 293 TCGAGATAT-ATAAAGTCTCTCACTGCGACGGCTTATTGTTATGCGTCTGCGTCACCAA- 350 Query 371 GAAGTGGA-AGGTACTAGGCTCGTGGTATGGAACCCGTGTACCGGTCTAACCAA-GTGGA 428 | | ||| | |||| |||||| |||||||||||||||||| |||| || ||| ||||| Sbjct 351 G--GAGGACA-ATACTTGGCTCGCGGTATGGAACCCGTGTACTGGTC-AAACAAGGTGGA 406 Query 429 TCCAACACAGAAAGCTTTGCTACATCTGTAC--CTATGCTCTTGGTTCTTACCAAGACAA 486 | |||| || | | | | || || || |||| |||| || || || | | | Sbjct 407 TTCAACCCA-TGA-C--T--T--ATATG-ACAACTATACTCTCGGATCCTA-C----C-A 451 Query 487 CAAATCTGGCAATAAGAGCTACAAAATATTGAGC-CGCA--GGTTTTATGGTCACCAAGA 543 ||| | ||| |||||||| |||||| || | || || ||| ||| | | || Sbjct 452 -AAA--T---AAT---AGCTACAATATATTG-GCACACACTGG-TTT-TGG---CTACGA 496 Query 544 CCCA-GAATTCGAAATTTATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCA 602 ||| |||||| |||||||||| |||||||| ||||||| ||||||| |||||| || Sbjct 497 -CCACGAATTCCAAATTTATGAAATTAACTCCAATTCAT---GGAGGATTATTGATGCCA 552 Query 603 ATGTGGACTGCACCGA-TA-TGTACA-T--TCG-GAACGTGTCTTTGAAAGGAAAGACTT 656 | |||||| || | || ||| | | ||| | |||||||||||| |||||||||| Sbjct 553 CTTTGGACTTCA--AATTAGGGTATATTGGTCGTG-GCGTGTCTTTGAAGGGAAAGACTT 609 Query 657 ACTGGTTTGCTACAAATGAAAAAGAGAAACAACTCGGCCTATTCTTAATCAGTTTTGATT 716 ||||| |||||| |||| ||||||||| || ||| |||||||||||||||||||| Sbjct 610 ACTGGATTGCTAGTGGTGAAGAAGAGAAACGGCTTGGCAAATTCTTAATCAGTTTTGATT 669 Query 717 ATACAACAGAAAGATTTGAACGTCTATGTCTACCTTATCCGCATCCA-TATCATGGTTAT 775 |||| ||||||||||||||||||||||| | | | |||| || | |||| | ||||| Sbjct 670 ATACGACAGAAAGATTTGAACGTCTATG--T--C-T-TCCGAAT-AAGTATCCTTGTTAT 722 Query 776 -CAAAACGAGTCTCTATCTGTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTAC 834 ||| | | ||||||| ||||||||||||||||||||||| |||||| ||||| Sbjct 723 GCAACTC-TGGCTCTATCCGTTGTTAGAGAAGAGAAACTTTCCATGTTATCGCAACGCGG 781 Query 835 ATTTACGTCGAAGACAGAGATATGGGTGACAAATAAGATTGGTGAGAC-CAAAGTGTTGT 893 | ||| || ||| |||| ||||||||||||||||||||||||||||| ||| ||| ||| Sbjct 782 AATTAAATCAAAGGCAGAAATATGGGTGACAAATAAGATTGGTGAGACACAA-GTGGTGT 840 Query 894 CGTGGATCAAGGTCTTAGCGGTGGATTTG 922 |||||| || ||||||||| |||||||| Sbjct 841 CGTGGAGCATGGTCTTAGCTTTGGATTTG 869 > AT1G24792.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylglucosamine deacetylase family protein/F-box protein related | chr1:8766060-8767096 FORWARD LENGTH=1037 Length=1037 Score = 329 bits (178), Expect = 3e-89 Identities = 694/929 (75%), Gaps = 92/929 (10%) Strand=Plus/Plus Query 26 ATGATGCCAGAACTTCCAAAGGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCAACA 85 |||||| | ||||||||| || |||||||||| |||||||||| ||||||||| || | Sbjct 1 ATGATGTCGGAACTTCCAGAGCATTTGTTAGAAGAGATACTCTACCGCGTTCCAGCTATG 60 Query 86 TCTCTGAAACGA-TTACGATCTACTTGCAAACGATGGAACCT-TTTAAAAAACGATAAGA 143 ||| |||||| | ||| | |||||||||||| ||||||| || |||| || |||| || Sbjct 61 TCTTTGAAAC-AGTTAGGGTCTACTTGCAAAGGATGGAA-CTGTTTATTCAAGGATAGGA 118 Query 144 GATTCACAAGAAAACACTTCCACAAA-GCCCCAAGACAATCTCTGATTCTCATGTGGAAT 202 ||||||||||||||||||| | ||| |||| ||| || | |||||||| ||||| || Sbjct 119 GATTCACAAGAAAACACTTGGATAAAGGCCCAAAG-CAGTTTCTGATTCACATGTCTAAA 177 Query 203 GAG-TTTGGGTTTTCTTCGATGAACATCAATCTACACAGAGTTTCACCTATAGAGGTCAC 261 | | || |||| | ||||||| || |||| || ||| || ||| | || | ||||| Sbjct 178 GGGCTTAGGGTACGC-TCGATGAGTGTCGATCTCCATAGACTTCCACATGTAAAAGTCAC 236 Query 262 TGGTGAACTTAACCTAATCGACCCT-CAT-T-ATAGTTTAGATC-AGTTCAGGA--ACTC 315 | |||| ||| ||||||| ||||| || | ||| || | || || ||| || | | Sbjct 237 AGTTGAATTTACCCTAATCAACCCTAAATATCCTAG-TT-G-TCTAGATCAAGATCAAT- 292 Query 316 TCTA-CTCTGCCACACT-TCTGGCT--TATTG-TTATTGTTATGCGTCTGTGACAACAAC 370 || | | | | | | ||| || | | ||||||||||||||||| | || ||| Sbjct 293 TCGAGATAT-ATAAAGTCTCTCACTGCGACGGCTTATTGTTATGCGTCTGCGTCACCAA- 350 Query 371 GAAGTGGA-AGGTACTAGGCTCGTGGTATGGAACCCGTGTACCGGTCTAACCAA-GTGGA 428 | | ||| | |||| |||||| |||||||||||||||||| |||| || ||| ||||| Sbjct 351 G--GAGGACA-ATACTTGGCTCGCGGTATGGAACCCGTGTACTGGTC-AAACAAGGTGGA 406 Query 429 TCCAACACAGAAAGCTTTGCTACATCTGTAC--CTATGCTCTTGGTTCTTACCAAGACAA 486 | |||| || | | | | || || || |||| |||| || || || | | | Sbjct 407 TTCAACCCA-TGA-C--T--T--ATATG-ACAACTATACTCTCGGATCCTA-C----C-A 451 Query 487 CAAATCTGGCAATAAGAGCTACAAAATATTGAGC-CGCA--GGTTTTATGGTCACCAAGA 543 ||| | ||| |||||||| |||||| || | || || ||| ||| | | || Sbjct 452 -AAA--T---AAT---AGCTACAATATATTG-GCACACACTGG-TTT-TGG---CTACGA 496 Query 544 CCCA-GAATTCGAAATTTATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCA 602 ||| |||||| |||||||||| |||||||| ||||||| ||||||| |||||| || Sbjct 497 -CCACGAATTCCAAATTTATGAAATTAACTCCAATTCAT---GGAGGATTATTGATGCCA 552 Query 603 ATGTGGACTGCACCGA-TA-TGTACA-T--TCG-GAACGTGTCTTTGAAAGGAAAGACTT 656 | |||||| || | || ||| | | ||| | |||||||||||| |||||||||| Sbjct 553 CTTTGGACTTCA--AATTAGGGTATATTGGTCGTG-GCGTGTCTTTGAAGGGAAAGACTT 609 Query 657 ACTGGTTTGCTACAAATGAAAAAGAGAAACAACTCGGCCTATTCTTAATCAGTTTTGATT 716 ||||| |||||| |||| ||||||||| || ||| |||||||||||||||||||| Sbjct 610 ACTGGATTGCTAGTGGTGAAGAAGAGAAACGGCTTGGCAAATTCTTAATCAGTTTTGATT 669 Query 717 ATACAACAGAAAGATTTGAACGTCTATGTCTACCTTATCCGCATCCA-TATCATGGTTAT 775 |||| ||||||||||||||||||||||| | | | |||| || | |||| | ||||| Sbjct 670 ATACGACAGAAAGATTTGAACGTCTATG--T--C-T-TCCGAAT-AAGTATCCTTGTTAT 722 Query 776 -CAAAACGAGTCTCTATCTGTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTAC 834 ||| | | ||||||| ||||||||||||||||||||||| |||||| ||||| Sbjct 723 GCAACTC-TGGCTCTATCCGTTGTTAGAGAAGAGAAACTTTCCATGTTATCGCAACGCGG 781 Query 835 ATTTACGTCGAAGACAGAGATATGGGTGACAAATAAGATTGGTGAGAC-CAAAGTGTTGT 893 | ||| || ||| |||| ||||||||||||||||||||||||||||| ||| ||| ||| Sbjct 782 AATTAAATCAAAGGCAGAAATATGGGTGACAAATAAGATTGGTGAGACACAA-GTGGTGT 840 Query 894 CGTGGATCAAGGTCTTAGCGGTGGATTTG 922 |||||| || ||||||||| |||||||| Sbjct 841 CGTGGAGCATGGTCTTAGCTTTGGATTTG 869 > AT1G25053.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylglucosamine deacetylase family protein/F-box protein related | chr1:8803300-8804091 FORWARD LENGTH=792 Length=792 Score = 267 bits (144), Expect = 2e-70 Identities = 489/648 (75%), Gaps = 54/648 (8%) Strand=Plus/Plus Query 497 AATAAGAGCTACAAAATATTGAGC-CGCA--GGTTTTATGGTCACCAAGACCCA-GAATT 552 ||||| |||||||| |||||| || | || || ||| ||| | | || ||| ||||| Sbjct 121 AATAATAGCTACAATATATTG-GCACACACTGG-TTT-TGG---CTACGA-CCACGAATT 173 Query 553 CGAAATTTATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTG 612 | |||||||||| |||||||| ||||||| ||||||| |||||| || | |||||| Sbjct 174 CCAAATTTATGAAATTAACTCCAATTCAT---GGAGGATTATTGATGCCACTTTGGACTT 230 Query 613 CACCGA-TA-TGTACA-T--TCG-GAACGTGTCTTTGAAAGGAAAGACTTACTGGTTTGC 666 || | || ||| | | ||| | |||||||||||| ||||||||||||||| |||| Sbjct 231 CA--AATTAGGGTATATTGGTCGTG-GCGTGTCTTTGAAGGGAAAGACTTACTGGATTGC 287 Query 667 TACAAATGAAAAAGAGAAACAACTCGGCCTATTCTTAATCAGTTTTGATTATACAACAGA 726 || |||| ||||||||| || ||| |||||||||||||||||||||||| ||||| Sbjct 288 TAGTGGTGAAGAAGAGAAACGGCTTGGCAAATTCTTAATCAGTTTTGATTATACGACAGA 347 Query 727 AAGATTTGAACGTCTATGTCTACCTTATCCGCATCCA-TATCATGGTTAT-CAAAACGAG 784 |||||||||||||||||| | | | |||| || | |||| | ||||| ||| | | Sbjct 348 AAGATTTGAACGTCTATG--T--C-T-TCCGAAT-AAGTATCCTTGTTATGCAACTC-TG 399 Query 785 TCTCTATCTGTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGTCG 844 ||||||| ||||||||||||||||||||||| |||||| ||||| | ||| || Sbjct 400 GCTCTATCCGTTGTTAGAGAAGAGAAACTTTCCATGTTATCGCAACGCGGAATTAAATCA 459 Query 845 AAGACAGAGATATGGGTGACAAATAAGATTGGTGAGAC-CAAAGTGTTGTCGTGGATCAA 903 ||| |||| ||||||||||||||||||||||||||||| ||| ||| ||||||||| || Sbjct 460 AAGGCAGAAATATGGGTGACAAATAAGATTGGTGAGACACAA-GTGGTGTCGTGGAGCAT 518 Query 904 GGTCTTAGCGGTGGATTTG-ACGCCTGAGCCCAA-ATTTGACATAA----AA-TT-CTTG 955 ||||||||| |||||||| | |||| | | ||| | | || || || |||| Sbjct 519 GGTCTTAGCTTTGGATTTGCA-GCCTAAACGTTGTATTGGGGA-AAGCGGAAGTTTCTTG 576 Query 956 GTCGATGAGGAGAAGAAAGTCCTCGTGTATACTCAAAATAATGGATACAAAAGCCAAAGT 1015 ||||| ||| |||||| ||| |||||| | | | |||| | || || || | ||| Sbjct 577 GTCGACGAGAAGAAGAGAGTGGTCGTGTGTTGTGATAATATTAGAGACCAAGGAAAAACC 636 Query 1016 ATTGTATACATCGTTGGAAAGGACAACAAAGTTAGGGAAGTGGATTTTGGAGACGAATTC 1075 | ||| |||| ||||| ||||||||||||| | |||||| ||||| || || || | Sbjct 637 ACGGTACACATTTTTGGAGAGGACAACAAAGTGAAACAAGTGGGTTTTGAAGTCGGAT-C 695 Query 1076 AAAC-CAT-T--T-T-TGTTGAATTACGTTCCAAGCTTGACTCAAATC 1117 | | | | | | | |||| |||| |||||||| |||||||||||| Sbjct 696 AT-CTC-TGTAATGTATGTTTTATTATGTTCCAAGTTTGACTCAAATC 741 > AT1G24879.1 | Symbols: | pseudogene of UDP-3-O-acyl N-acetylglucosamine deacetylase family protein/F-box protein related | chr1:8780844-8781536 FORWARD LENGTH=693 Length=693 Score = 267 bits (144), Expect = 2e-70 Identities = 489/648 (75%), Gaps = 54/648 (8%) Strand=Plus/Plus Query 497 AATAAGAGCTACAAAATATTGAGC-CGCA--GGTTTTATGGTCACCAAGACCCA-GAATT 552 ||||| |||||||| |||||| || | || || ||| ||| | | || ||| ||||| Sbjct 49 AATAATAGCTACAATATATTG-GCACACACTGG-TTT-TGG---CTACGA-CCACGAATT 101 Query 553 CGAAATTTATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTG 612 | |||||||||| |||||||| ||||||| ||||||| |||||| || | |||||| Sbjct 102 CCAAATTTATGAAATTAACTCCAATTCAT---GGAGGATTATTGATGCCACTTTGGACTT 158 Query 613 CACCGA-TA-TGTACA-T--TCG-GAACGTGTCTTTGAAAGGAAAGACTTACTGGTTTGC 666 || | || ||| | | ||| | |||||||||||| ||||||||||||||| |||| Sbjct 159 CA--AATTAGGGTATATTGGTCGTG-GCGTGTCTTTGAAGGGAAAGACTTACTGGATTGC 215 Query 667 TACAAATGAAAAAGAGAAACAACTCGGCCTATTCTTAATCAGTTTTGATTATACAACAGA 726 || |||| ||||||||| || ||| |||||||||||||||||||||||| ||||| Sbjct 216 TAGTGGTGAAGAAGAGAAACGGCTTGGCAAATTCTTAATCAGTTTTGATTATACGACAGA 275 Query 727 AAGATTTGAACGTCTATGTCTACCTTATCCGCATCCA-TATCATGGTTAT-CAAAACGAG 784 |||||||||||||||||| | | | |||| || | |||| | ||||| ||| | | Sbjct 276 AAGATTTGAACGTCTATG--T--C-T-TCCGAAT-AAGTATCCTTGTTATGCAACTC-TG 327 Query 785 TCTCTATCTGTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGTCG 844 ||||||| ||||||||||||||||||||||| |||||| ||||| | ||| || Sbjct 328 GCTCTATCCGTTGTTAGAGAAGAGAAACTTTCCATGTTATCGCAACGCGGAATTAAATCA 387 Query 845 AAGACAGAGATATGGGTGACAAATAAGATTGGTGAGAC-CAAAGTGTTGTCGTGGATCAA 903 ||| |||| ||||||||||||||||||||||||||||| ||| ||| ||||||||| || Sbjct 388 AAGGCAGAAATATGGGTGACAAATAAGATTGGTGAGACACAA-GTGGTGTCGTGGAGCAT 446 Query 904 GGTCTTAGCGGTGGATTTG-ACGCCTGAGCCCAA-ATTTGACATAA----AA-TT-CTTG 955 ||||||||| |||||||| | |||| | | ||| | | || || || |||| Sbjct 447 GGTCTTAGCTTTGGATTTGCA-GCCTAAACGTTGTATTGGGGA-AAGCGGAAGTTTCTTG 504 Query 956 GTCGATGAGGAGAAGAAAGTCCTCGTGTATACTCAAAATAATGGATACAAAAGCCAAAGT 1015 ||||| ||| |||||| ||| |||||| | | | |||| | || || || | ||| Sbjct 505 GTCGACGAGAAGAAGAGAGTGGTCGTGTGTTGTGATAATATTAGAGACCAAGGAAAAACC 564 Query 1016 ATTGTATACATCGTTGGAAAGGACAACAAAGTTAGGGAAGTGGATTTTGGAGACGAATTC 1075 | ||| |||| ||||| ||||||||||||| | |||||| ||||| || || || | Sbjct 565 ACGGTACACATTTTTGGAGAGGACAACAAAGTGAAACAAGTGGGTTTTGAAGTCGGAT-C 623 Query 1076 AAAC-CAT-T--T-T-TGTTGAATTACGTTCCAAGCTTGACTCAAATC 1117 | | | | | | | |||| |||| |||||||| |||||||||||| Sbjct 624 AT-CTC-TGTAATGTATGTTTTATTATGTTCCAAGTTTGACTCAAATC 669 > AT1G25141.1 | Symbols: | F-box associated ubiquitination effector family protein | chr1:8817678-8818382 FORWARD LENGTH=705 Length=705 Score = 263 bits (142), Expect = 3e-69 Identities = 346/439 (79%), Gaps = 35/439 (8%) Strand=Plus/Plus Query 497 AATAAGAGCTACAAAATATTGAGC-CGCA--GGTTTTATGGTCACCAAGACCCA-GAATT 552 ||||| |||||||| |||||| || | || || ||| ||| | | || ||| ||||| Sbjct 121 AATAATAGCTACAATATATTG-GCACACACTGG-TTT-TGG---CTACGA-CCACGAATT 173 Query 553 CGAAATTTATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTG 612 | |||||||||| |||||||| ||||||| ||||||| |||||| || | |||||| Sbjct 174 CCAAATTTATGAAATTAACTCCAATTCAT---GGAGGATTATTGATGCCACTTTGGACTT 230 Query 613 CACCGA-TA-TGTACA-T--TCG-GAACGTGTCTTTGAAAGGAAAGACTTACTGGTTTGC 666 || | || ||| | | ||| | |||||||||||| ||||||||||||||| |||| Sbjct 231 CA--AATTAGGGTATATTGGTCGTG-GCGTGTCTTTGAAGGGAAAGACTTACTGGATTGC 287 Query 667 TACAAATGAAAAAGAGAAACAACTCGGCCTATTCTTAATCAGTTTTGATTATACAACAGA 726 || |||| ||||||||| || ||| |||||||||||||||||||||||| ||||| Sbjct 288 TAGTGGTGAAGAAGAGAAACGGCTTGGCAAATTCTTAATCAGTTTTGATTATACGACAGA 347 Query 727 AAGATTTGAACGTCTATGTCTACCTTATCCGCATCCA-TATCATGGTTAT-CAAAACGAG 784 |||||||||||||||||| | | | |||| || | |||| | ||||| ||| | | Sbjct 348 AAGATTTGAACGTCTATG--T--C-T-TCCGAAT-AAGTATCCTTGTTATGCAACTC-TG 399 Query 785 TCTCTATCTGTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGTCG 844 ||||||| ||||||||||||||||||||||| |||||| ||||| | ||| || Sbjct 400 GCTCTATCCGTTGTTAGAGAAGAGAAACTTTCCATGTTATCGCAACGCGGAATTAAATCA 459 Query 845 AAGACAGAGATATGGGTGACAAATAAGATTGGTGAGAC-CAAAGTGTTGTCGTGGATCAA 903 ||| |||| ||||||||||||||||||||||||||||| ||| ||| ||||||||| || Sbjct 460 AAGGCAGAAATATGGGTGACAAATAAGATTGGTGAGACACAA-GTGGTGTCGTGGAGCAT 518 Query 904 GGTCTTAGCGGTGGATTTG 922 ||||||||| |||||||| Sbjct 519 GGTCTTAGCTTTGGATTTG 537 > AT3G18900.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: synergid; CONTAINS InterPro DOMAIN/s: F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451), Protein of unknown function DUF547 (InterPro:IPR006869); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF547 (TAIR:AT5G66600.3). | chr3:6517181-6521019 FORWARD LENGTH=2500 Length=2500 Score = 134 bits (72), Expect = 3e-30 Identities = 117/138 (85%), Gaps = 6/138 (4%) Strand=Plus/Plus Query 794 GTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGT-CGAAGACAGA 852 ||||||||||||||||||||||||||||||||||| || | || || || | ||||| || Sbjct 1981 GTTGTTAGAGAAGAGAAACTTTCTGTGTTATTACAGCG-AGATATAAGTTCCAAGACTGA 2039 Query 853 GATATGGGTGACAAATAAGATTGGTGAGACCA--AA-GTGTTGTCGTGGATCAAGGTCTT 909 |||||||||||||| |||||||| ||| |||| || ||| |||| |||| |||| |||| Sbjct 2040 GATATGGGTGACAAGTAAGATTGATGACACCACCAAAGTGGTGTCTTGGAGCAAGATCTT 2099 Query 910 AGCGGTGGATTTGACGCC 927 ||| ||||||||| ||| Sbjct 2100 AGCATTGGATTTGA-GCC 2116 > AT3G22350.1 | Symbols: | F-box and associated interaction domains-containing protein | chr3:7901905-7903041 FORWARD LENGTH=1137 Length=1137 Score = 117 bits (63), Expect = 3e-25 Identities = 155/197 (79%), Gaps = 16/197 (8%) Strand=Plus/Plus Query 46 GGATTTGTTAGAGGAGATACTCTGC-CGCGTTCCGGCAACATCTCTGAAACGATTACGAT 104 ||||||| |||| || ||||||| | | ||| |||| |||||||||||||||||||||| Sbjct 18 GGATTTGGTAGAAGAAATACTCT-CAAGGGTTTCGGCCACATCTCTGAAACGATTACGAT 76 Query 105 CTACTTGCAAACGATGGAAC-CTTT-T--AAAAAACGATAAGAGATTCA-CAAGAAAACA 159 |||||||||||| ||||||| |||| | ||||||||| | | |||| | ||||| || Sbjct 77 CTACTTGCAAACAATGGAACACTTTATTCAAAAAACGA-A-GT--TTCAGCCAGAAA-CA 131 Query 160 CTTCCACAAAGCCCCAAGACAA-TCTCTGATTCTCATGTGGAATGAGTTTGG-GTTTTCT 217 ||| || | ||| |||| | | ||| || ||||||||| ||| |||| | |||| || Sbjct 132 CTTTCATATAGCTCCAA-AGGAGTCTATGGTTCTCATGTTGAAGGAGTACAGAGTTTGCT 190 Query 218 TCGATGAACATCAATCT 234 | ||||| |||||||| Sbjct 191 -CAATGAATATCAATCT 206 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 58684437105 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5