BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930722
Length=1471
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:133... 2224 0.0
AT2G04070.1 | Symbols: | MATE efflux family protein | chr2:135... 1869 0.0
AT2G04080.1 | Symbols: | MATE efflux family protein | chr2:135... 1718 0.0
AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein... 1631 0.0
AT2G14661.1 | Symbols: | Pseudogene of AT2G04040; ATDTX1; anti... 669 0.0
> AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:1337386-1339270
REVERSE LENGTH=1431
Length=1431
Score = 2224 bits (1204), Expect = 0.0
Identities = 1357/1432 (95%), Gaps = 6/1432 (0%)
Strand=Plus/Plus
Query 21 ATGGAAGAGCCATTTCTTCTGCAAGATGAGCAACTT-TCCCCCTGTAAAGCCACATGGAA 79
||||||||||| |||||||||||||||||||| ||| | ||||||||||| |||||||||
Sbjct 1 ATGGAAGAGCCCTTTCTTCTGCAAGATGAGCACCTTGT-CCCCTGTAAAGACACATGGAA 59
Query 80 AAGTGGTCAGGTTACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGCTCCTATGGCCGC 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 AAGTGGTCAGGTTACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGCTCCTATGGCCGC 119
Query 140 CGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGCTGGCCACAATGG 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGCTGGCCACAATGG 179
Query 200 TGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACGTTTCCGGGTTCAG 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACGTTTCCGGGTTCAG 239
Query 260 TATTTTGTTTGGGTTAGCGGGTGCCCTAGAAACTCTTTGTGGCCAAGCTTATGGAGCCAA 319
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 240 TATTTTGTTTGGGTTAGCGGGTGCACTAGAAACTCTTTGTGGCCAAGCTTATGGAGCCAA 299
Query 320 ACAATACGAAAAAATCGGAACCTACACATACTCTGCAACGGTCTCTAACATCCCTATTTG 379
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||
Sbjct 300 ACAATACGAAAAAATCGGAACCTACACATACTCTGCAACTGCCTCTAACATCCCTATATG 359
Query 380 TGTCCTCATATCAATTCTATGGATTTACATCGAAAAGCTCTTAATCTCTCTCGGTCAAGA 439
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TGTCCTCATATCAGTTCTCTGGATTTACATCGAAAAGCTCTTAATCTCTCTCGGTCAAGA 419
Query 440 CCCTGACATCTCCAGAGTTGCTGGCTCCTACGCCTTTTGGCTCATACCGGCTTTGTTCGC 499
|||||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||
Sbjct 420 CCCTGACATCTCTAGAGTCGCTGGCTCCTATGCCTTGTGGCTCATACCGGCTTTGTTCGC 479
Query 500 ACATGCGTTTTTCATACCACTGACTCGGTTTCTGCTAGCACAAGGGTTGGTTCTTCCCCT 559
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 480 CCATGCGTTTTTCATCCCACTGACTCGGTTTCTGCTAGCACAAGGGTTGGTTCTTCCACT 539
Query 560 GCTCTACTCTACCCTGACCACTCTTTTGTTCCACATCCCTGTTTGCTGGACTTTTGTTTT 619
|||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 540 GCTCTACTGTACCCTGACCACTCTTTTGTTCCACATCCCTGTTTGCTGGGCTTTTGTTTA 599
Query 620 CGCGCTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTGTGTCTTTCTGGTTTTA 679
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 600 CGCGTTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTGTGTCTTTCTGGTTCTA 659
Query 680 TGTTGTGATTCTCTCATGTTATGTGAGGTTCTCCAGCTCCTGCGACAAGACTCGCGTATT 739
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 660 TGTTGTGATTCTCTCATGTTATGTGAGGTACTCCAGCTCCTGCGACAAGACTCGCGTATT 719
Query 740 TGTATCCAGTGATTTCGTGTCTTGTATCAGGCAGTTCTTCCATTTCGGAGTCCCATCCGC 799
||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||
Sbjct 720 TGTATCCAGTGATTTCGTGTCTTGTATCAAGCAGTTCTTCCACTTCGGAGTCCCATCAGC 779
Query 800 GGCAATGCTTTGCCTAGAATGGTGGCTGTTTGAGCTACTTATACTCTGCTCAGGTCTTCT 859
||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 780 GGCAATGGTTTGCCTAGAATGGTGGCTATTTGAGCTACTCATACTCTGTTCAGGTCTTCT 839
Query 860 CCTAAACCCAAAACTCGAAACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAGTTTGCA 919
|| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 840 CCCAAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAGTTTGCA 899
Query 920 CTATGTGATCCCAGCTGGAGTCGCGGCGGCTGTGAGCACACGTGTGTCAAACAAATTGGG 979
||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 900 CTATGTGATTCCAGGTGGAGTCGCGGCGGCTGTGAGCACACGCGTGTCAAACAAATTGGG 959
Query 980 AGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGGCTGGT 1039
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 960 AGCTGGGATTCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTGGCTTGT 1019
Query 1040 AGAATCAGTTTTCTCTACCACACTTCTCTTCACCTGCCGGAACATCATAGGCTACGCATT 1099
||| |||| ||||| || ||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 1020 AGAGTCAGCTTTCTTTAGCACACTTCTCTTCACATGCCGAAACATTATAGGCTACGCATT 1079
Query 1100 TAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCTGTCTCTC 1159
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1080 CAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTAACCTAACTCCTTTGCTCTGCCTCTC 1139
Query 1160 CTTTGTTCTCGACGGATTT-ACCGCAGTTCTTAATGGTGTTGCTAGGGGAAGTGGTTGGC 1218
|||| | |||||||| ||| || |||||||| ||||| ||||| ||||||||||||||||
Sbjct 1140 CTTTATCCTCGACGG-TTTCACAGCAGTTCTGAATGGGGTTGCAAGGGGAAGTGGTTGGC 1198
Query 1219 AACACATTGGAGCTTTGAACAATGTGGTAGCTTATTATCTCGTAGGAGCTCCGGTTGGAG 1278
|||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct 1199 AACACATTGGAGCTTTGAACAACGTGGTAGCTTATTATCTTGTAGGAGCTCCTGTTGGAG 1258
Query 1279 TTTACTTAGCTTTTAATCGTGAGTTTAACGGAAAAGGACTCTGGTGCGGTGTTGTGGTCG 1338
| ||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 1259 TATACTTAGCTTTCAATCGTGAGTTGAACGGAAAAGGACTTTGGTGTGGTGTTGTGGTCG 1318
Query 1339 GATCCGCTGTGCAAGCCATTATACTGTCTTTTGTCACATG-TTCCATAAATTGGAAGGAA 1397
||||||||||||||||||| ||| || ||||||||||| | |||||||||||||||||||
Sbjct 1319 GATCCGCTGTGCAAGCCATAATATTGGCTTTTGTCACA-GCTTCCATAAATTGGAAGGAA 1377
Query 1398 CAGGCTGAGAAGGCTAGGAAGAGAATAATCTCGACTGAAAATAGATTGGCTT 1449
|||||||||||||||||||||||||| |||| | |||||||||||||||||
Sbjct 1378 CAGGCTGAGAAGGCTAGGAAGAGAATGGTCTCTAGTGAAAATAGATTGGCTT 1429
> AT2G04070.1 | Symbols: | MATE efflux family protein | chr2:1353755-1355790
REVERSE LENGTH=1623
Length=1623
Score = 1869 bits (1012), Expect = 0.0
Identities = 1314/1460 (90%), Gaps = 19/1460 (1%)
Strand=Plus/Plus
Query 21 ATGGAAGAGCCATTTCTTCTGCAAGATGAGCA-ACT-TTCCCCCTGTAAAGCCACATGGA 78
||||||||||||||||||| |||||||||||| | | | ||||||||||||||||||||
Sbjct 1 ATGGAAGAGCCATTTCTTCCGCAAGATGAGCAGA-TAGT-CCCCTGTAAAGCCACATGGA 58
Query 79 AAAGTGGTCAGGTTACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGCTCCTATGGCCG 138
||||||||||| | | ||||||||||||||||||||| ||||||| | ||||||||||
Sbjct 59 AAAGTGGTCAGCTCAATGTCGAGCTGAAGAAAGTGAGCCGCTTGGCTGTTCCTATGGCCA 118
Query 139 CCGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGCTGGCCACAATG 198
||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 119 CCGTGACCATTGCACAGTACTTATTGCCAGTCATCTCAGTCATGGTCGCTGGCCACAACG 178
Query 199 GTGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACGTTTCCGGGTTCA 258
| ||||||||||||||||| ||||||||||| |||||||||||||| || ||||| ||||
Sbjct 179 GCGAGCTCCAGCTCTCCGGTGTCGCTCTTGCTACCTCCTTCACAAATGTCTCCGGTTTCA 238
Query 259 GTATTTTGTTTGGGTTAGCGGGTGCCCTAGAAACTCTTTGTGGCCAAGCTTATGGAGCCA 318
| ||| |||||||||||| |||| | ||||||||||||| ||||||||||||||||||||
Sbjct 239 GCATTATGTTTGGGTTAGTGGGTTCACTAGAAACTCTTTCTGGCCAAGCTTATGGAGCCA 298
Query 319 AACAATACGAAAAAATCGGAACCTACACATACTCTGCAACGGT-CTCTAACATCCCTATT 377
|||||||||||||||| |||||||| |||||||| |||| | |||||||||||||||
Sbjct 299 AACAATACGAAAAAATGGGAACCTATACATACTCCGCAA-TTTCCTCTAACATCCCTATA 357
Query 378 TGTGTCCTCATATCAATTCTATGGATTTACATCGAAAAGCTCTTAATCTCTCTCGGTCAA 437
|||||||||||||||||||| ||||| ||||| ||||| ||||| ||||||||||| |||
Sbjct 358 TGTGTCCTCATATCAATTCTCTGGATATACATGGAAAAACTCTTGATCTCTCTCGGACAA 417
Query 438 GACCCTGACATCTCCAGAGTTGCTGGCTCCTACGCCTTTTGGCTCATACCGGCTTTGTTC 497
|||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct 418 GACCCTGACATCTCCAGAGTCGCTGGCTCCTACGCCTTGCGGCTCATACCGACTTTGTTT 477
Query 498 GCACATGCGTTTTTCATACCACTGACTCGGTTTCTGCTAGCACAAGGGTTGGTTCTTCCC 557
|| |||||| || || |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 478 GCCCATGCGATTGTCTTACCACTGACCCGGTTTCTGCTAGCACAAGGGTTGGTTCTTCCA 537
Query 558 CTGCTCTACTCTACCCTGACCACTCTTTTGTTCCACATCCCTGTTTGCTGGACTTTTGTT 617
||||| |||| | |||||||||| |||||||||||||| | |||||||||||||| |||
Sbjct 538 CTGCTTTACTTTGCCCTGACCACCCTTTTGTTCCACATTGCGGTTTGCTGGACTTTGGTT 597
Query 618 TTCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTGTGTCTTTCTGGTTT 677
| ||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 598 TCCGCACTTGGTTTGGGAAGCAATGGAGCTGCCTTGGCTATTAGTGTGTCTTTCTGGTTT 657
Query 678 TAT-GTTGTGATTCTCTCATGTTATGTGAGGTTCTCCAGCTCCTGCGACAAGACTCG-CG 735
| | | | ||| ||||||||||||||||| ||||||||||| ||||| |||||||| ||
Sbjct 658 T-TCGCTATGACACTCTCATGTTATGTGAGATTCTCCAGCTCTTGCGAGAAGACTCGCCG 716
Query 736 TATTTGTAT-CCAGTGATTTCGTGTCTTGTATCAGGCAGTTCTTCCATT-TCGGAGTCCC 793
|||||||| ||| |||||| |||||| | ||| ||||||||||| || | ||||||||
Sbjct 717 -ATTTGTATCCCA-AGATTTCTTGTCTTCTGTCAAGCAGTTCTTCCGTTAT-GGAGTCCC 773
Query 794 ATCCGCGGCAATGCTTTGCCTAGAATGGTGGCTGTTTGAGCTACTTATACTCTGCTCAGG 853
||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 774 ATCAGCGGCAATGCTTTGCCTAGAATGGTGGCTATTTGAGCTACTTATACTCTGTTCAGG 833
Query 854 TCTTCTCCTAAACCCAAAACTCGAAACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAG 913
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 834 TCTTCTCCAAAACCCAAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAC 893
Query 914 TTTGCACTATGTGATCCCAGCTGGAGTCGCGGCGGCTGTGAGCACACGTGTGTCAAACAA 973
||||||||||||||| |||| |||||||||||| |||||||||||||| |||||||||||
Sbjct 894 TTTGCACTATGTGATTCCAGTTGGAGTCGCGGCCGCTGTGAGCACACGCGTGTCAAACAA 953
Query 974 ATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTG 1033
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 954 ATTGGGAGCTGGGATTCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTTGTCTCTG 1013
Query 1034 GCTGGTAGAATCAGT-TTTCTCTACCACACTTCTCTTCACCTGCCGGAACATCATAGGCT 1092
||| ||||| ||| | ||||| || || |||||||||| ||| | |||||||||||||||
Sbjct 1014 GCTTGTAGAGTCA-TCTTTCTTTAGCATACTTCTCTTCGCCTTCAGGAACATCATAGGCT 1072
Query 1093 ACGCATTTAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTTTGCTCT 1152
||||||| |||||||| |||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1073 ACGCATTCAGCAACAGTAAAGAAGTTGTGGACTATGTGGCTGATCTATCTCCTTTGCTCT 1132
Query 1153 GTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGTGTTGCTAGGGGAAGTG 1212
|||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||
Sbjct 1133 GTCTCTCCTTTGTTCTTGACGGATTTACCGCAGTTCTTAATGGGGTTGCCAGGGGATGTG 1192
Query 1213 GTTGGCAACACATTGGAGCTTTGAACAATGTGGTAGCTTATTATCTCGTAGGAGCTCCGG 1272
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1193 GTTGGCAACACATTGGAGCTTTGAACAACGTAGTAGCTTATTATCTCGTAGGAGCTCCGG 1252
Query 1273 TTGGAGTTTACTTAGCTTTTAATCGTGAGTTTAACGGAAAAGGACTCTGGTGCGGTGTTG 1332
||||| | || |||||||| | | ||||||| |||||||||||||| ||||| ||||| |
Sbjct 1253 TTGGAATATATTTAGCTTTCAGTTGTGAGTTGAACGGAAAAGGACTATGGTGTGGTGTAG 1312
Query 1333 TGGTCGGATCCGCTGTGCAAGCCATTATACTGTCTTTTGTCACATG-TTCCATAAATTGG 1391
|||| ||||||||||||||||||||||||||| || ||||||| | |||||| ||||||
Sbjct 1313 TGGTTGGATCCGCTGTGCAAGCCATTATACTGGCTATTGTCACG-GCTTCCATGAATTGG 1371
Query 1392 AAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCGACTGAAAATAGATTGGCTTGA 1451
||||||||||| ||||||| ||||||||| ||||||| | ||||||| ||||||||| |
Sbjct 1372 AAGGAACAGGCCAAGAAGGCAAGGAAGAGACTAATCTCAAGTGAAAATGGATTGGCTT-A 1430
Query 1452 AAGAAGGGTGTTTCTGAGAG 1471
||||| ||||||||||||||
Sbjct 1431 AAGAATGGTGTTTCTGAGAG 1450
> AT2G04080.1 | Symbols: | MATE efflux family protein | chr2:1357189-1359253
REVERSE LENGTH=1663
Length=1663
Score = 1718 bits (930), Expect = 0.0
Identities = 1295/1472 (88%), Gaps = 22/1472 (1%)
Strand=Plus/Plus
Query 11 GAAGACAACAATGGAAGAGCCATTTCTTCTGCA-AGATGAGCAACTT--TCCCCCTGTAA 67
|||||| |||||||||||||||||||||| | | ||| |||| | || | | | |||||
Sbjct 85 GAAGACGACAATGGAAGAGCCATTTCTTCCG-AGAGACGAGC-AGTTAGT-CTCTTGTAA 141
Query 68 AGCCACATGGAAAAGTGGTCAGGTTACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGC 127
| |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 142 ATCCACATGGCAAAGTGGTCAGGTCACCGTCGAGCTGAAGAAAGTGAGCCGCTTGGCCGC 201
Query 128 TCCTATGGCCGCCGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGC 187
|||||||||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 202 TCCTATGGCCACCGTAACCATAGCTCAGTACTTATTGCCTGTCATCTCAGTCATGGTCGC 261
Query 188 TGGCCACAAT-GGTGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACG 246
|||||| || || ||| | ||||| |||| ||||| ||||| || || ||||||||||
Sbjct 262 CGGCCAC-ATCGGCGAGTTGGAGCTCGCCGGTGTCGCGCTTGCCACGTCTTTCACAAACG 320
Query 247 TTTCCGGGTTCAGTATTTTGTTTGGGTTAGCGGGTGCCCTAGAAACTCTTTGTGGCCAAG 306
||||||| ||||| || |||||||||||| ||||| | |||||||||||||||||||
Sbjct 321 TTTCCGGCTTCAGCATAATGTTTGGGTTAGTTGGTGCATTGGAAACTCTTTGTGGCCAAG 380
Query 307 CTTATGGAGCCA-AACAATACGAAAAAATCGGAACCTACACATACTCTGCAACGGTC-TC 364
| ||||||| || ||||||||||||||||||||||||| ||||||||||||| || | ||
Sbjct 381 CCTATGGAG-CAGAACAATACGAAAAAATCGGAACCTATACATACTCTGCAATGG-CTTC 438
Query 365 TAACATCCCTATTTGTGTCCTCATATCAATTCTATGGATTTACATCGAAAAGCTCTTAAT 424
||||| || |||||| || ||||||||||||||||||||||||||||||||||||| ||
Sbjct 439 CAACATACCAATTTGTTTCATCATATCAATTCTATGGATTTACATCGAAAAGCTCTTGAT 498
Query 425 CTCTCTCGGTCAAGACCCTGACATCTCCAGAGTTGCTGGCTCCTACGCCTTTTGGCTCAT 484
| ||||||| ||||| ||||||||||| ||||| |||||||||||| | || |||||| |
Sbjct 499 CACTCTCGGGCAAGAGCCTGACATCTCTAGAGTCGCTGGCTCCTACTCATTGTGGCTCGT 558
Query 485 ACCGGCTTTGTTCGCACATGCGT-TTTTCATACCACTGACTCGGTTTCTGCTAGCACAAG 543
|||||||||||| || ||||| | ||||| ||||||||||||||||||||||||||||||
Sbjct 559 ACCGGCTTTGTTTGCCCATGC-TATTTTCTTACCACTGACTCGGTTTCTGCTAGCACAAG 617
Query 544 GGTTGGTTCTTCCCCTGCTCTACTCTACCCTGACCACTCTTTTGTTCCACATCCCTGTTT 603
|||||||| || ||||||| |||||| || ||||||| ||||||||||| || | ||||
Sbjct 618 GGTTGGTTATTTCCCTGCTATACTCTGCCATGACCACCCTTTTGTTCCATATTGCGGTTT 677
Query 604 GCTGGACTTTTGTTTTCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTG 663
|||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||
Sbjct 678 GCTGGACTTTGGTTTTCGCGCTTGGTCTTGGAAGCAATGGAGCTGCTATTGCTATTAGTT 737
Query 664 TGTCTTTCTGGTTTTATGTTGTGATTCTCTCATGTTATGTGAGGTTCTCCAGCTCCTGCG 723
|||||||||||||||| | |||||| ||||||||| ||||||| || | |||||| ||||
Sbjct 738 TGTCTTTCTGGTTTTACGCTGTGATACTCTCATGTCATGTGAGATTTTTCAGCTCTTGCG 797
Query 724 ACAAGACTCGCGTATTTGTATCCAGTGATTTCGTGTCTTGTATCAGGCAGTTCTTCCATT 783
| |||||||||| ||||||||| | |||||| ||||| |||||| ||||| |||||| |
Sbjct 798 AGAAGACTCGCGGATTTGTATCAAATGATTTTATGTCTAGTATCAAGCAGTACTTCCAGT 857
Query 784 TCGGAGTCCCATCCGC-GGCAATGCTTTGCCTAGAATGGTGGCTGTTTGAGCTACTTATA 842
||||||||||||||| || | || ||||| ||||||||||||||||||||||||| |||
Sbjct 858 ACGGAGTCCCATCCGCTGG-ATTGATTTGCTTAGAATGGTGGCTGTTTGAGCTACTCATA 916
Query 843 CTCTGCTCAGGTCTTCTCCTAAACCCAAAACTCGAAACCTCTGTTCTTTCAATTTGTCTT 902
||||||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||
Sbjct 917 CTCTGCTCAGGTCTTCTCCCAAACCCAAAACTCGAGACATCTGTTCTTTCGATTTGTCTT 976
Query 903 ACAACAGCAAGTTTGCACTATGTGATCCCAGCTGGAGTCGCGGCGGCTGTGAGCACACGT 962
|||| || || ||| ||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 977 ACAATAGGAACTTTACACTATGTGATTCCATCTGGAGTCGCGGCGGCTGTGAGCACACGA 1036
Query 963 GTGTCAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGG 1022
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1037 GTGTCAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCCGTATTGGCAGGG 1096
Query 1023 CTTTGTCTCTGGCTGGTAGAATCAGTTTTCTCTACCACACTTCTCTTCACCTGCCGGAAC 1082
|||||||||||||| ||||| |||| ||||| || ||||||||||||||||||||| |||
Sbjct 1097 CTTTGTCTCTGGCTTGTAGAGTCAGCTTTCTTTAGCACACTTCTCTTCACCTGCCGAAAC 1156
Query 1083 ATCATAGGCTACGCATTTAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACT 1142
|||||||||||| |||| |||||||||||||||||||| |||||||| |||||| || ||
Sbjct 1157 ATCATAGGCTACACATTCAGCAACAGCAAAGAAGTTGTTGACTATGTTGCTGACATATCT 1216
Query 1143 CCTTTGCTCTGTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGTGTTGCT 1202
|||||||||||||||||||| | ||||||||||| || |||||||| ||||| || |||
Sbjct 1217 CCTTTGCTCTGTCTCTCCTTCATCCTCGACGGATTAACGGCAGTTCTAAATGGAGTGGCT 1276
Query 1203 AGGGGAAGTGGTTGGCAACACATTGGAGCTTTGAACAATGTGGTAGCTTATTATCTCGTA 1262
|||||| |||| |||||||||||||||||||||| ||| ||||| ||||||||||| |||
Sbjct 1277 AGGGGATGTGGGTGGCAACACATTGGAGCTTTGATCAACGTGGTGGCTTATTATCTTGTA 1336
Query 1263 GGAGCTCCGGTTGGAGTTTACTTAGCTTTTAATCGTGAGTTTAACGGAAAAGGACTCTGG 1322
|||||||| |||||||||||||||||||| | |||||||| || |||||||||||||||
Sbjct 1337 GGAGCTCCTGTTGGAGTTTACTTAGCTTTCAGTCGTGAGTGGAATGGAAAAGGACTCTGG 1396
Query 1323 TGCGGTGTTGTGGTCGGATCCGCTGTGCAAGCCA-TTATACTGTCTTTTGTCACATGT-T 1380
||||||||| |||| |||||||| |||||||||| || ||||| || | |||||| | |
Sbjct 1397 TGCGGTGTTATGGTTGGATCCGCGGTGCAAGCCACTT-TACTGGCTATCGTCACA-GCCT 1454
Query 1381 CCATAAATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCGACTGAAAATA 1440
|||| || |||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct 1455 CCATGAACTGGAAGGAACAGGCTGAGAAAGCAAGGAAGAGAATAATCTCTACTGAAAATG 1514
Query 1441 GATTGGCTTGAAAGAAGGGT-GTTTCTGAGAG 1471
|||||| || ||| || ||| ||| || ||||
Sbjct 1515 GATTGGTTT-AAATAAAGGTTGTTCCTAAGAG 1545
> AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein
| chr2:1334512-1336489 REVERSE LENGTH=1542
Length=1542
Score = 1631 bits (883), Expect = 0.0
Identities = 1274/1463 (87%), Gaps = 26/1463 (2%)
Strand=Plus/Plus
Query 17 AACAATGGAAGAGCCATTTCTTCTGCA-AGATGAGCAACT-TTCCCCCTGTAAAGCCACA 74
||||||||| ||||||||||||||| | ||| |||| || | ||| | | ||| ||||
Sbjct 6 AACAATGGAGGAGCCATTTCTTCTG-AGAGACGAGCTTCTAGT-CCCTTCTCAAGTCACA 63
Query 75 TGG-A-A-AAGTGGTCAGGTT-ACCGTCGAGCTGAAGAAAGTGAGCAGCTTGGCCGCTCC 130
||| | | || | || || ||||||||||| |||| ||||||| |||||||||||||
Sbjct 64 TGGCATACAAAT--CCA--TTAACCGTCGAGCTAAAGAGAGTGAGCCGCTTGGCCGCTCC 119
Query 131 TATGGCCGCCGTGACCATTGCTCAGTACTTATTGCCTGTCATTTCAGTCATGGTCGCTGG 190
||||||| | |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 120 TATGGCCACTGTGACCATTGCTCAGTACTTATTGCCTGTCATCTCGGTCATGGTCGCTGG 179
Query 191 CCACAATGGTGAGCTCCAGCTCTCCGGCGTCGCTCTTGCAACCTCCTTCACAAACGTTTC 250
|||||| || ||||||||||||||||| ||||||||||||| ||||||||||||||| |
Sbjct 180 CCACAACGGCGAGCTCCAGCTCTCCGGTGTCGCTCTTGCAAACTCCTTCACAAACGTCAC 239
Query 251 CGGGTTCAGTATTTTGTTTGGGTTAGCGGGTGCCCTAGAAACTCTTTGTGGCCAAGCTTA 310
||| || || ||| ||| ||| |||| |||||| || |||||||||||||||||||||||
Sbjct 240 CGGTTTTAGCATTATGTGTGGATTAGTGGGTGCACTTGAAACTCTTTGTGGCCAAGCTTA 299
Query 311 TGGAGCCAAACAATACGAAAAAATCGGAACCTACACATACTCTGCAACGGTCT-CTAACA 369
||||||||||||||| |||||||||||||| ||| |||||||||| | | || | ||||
Sbjct 300 TGGAGCCAAACAATATGAAAAAATCGGAACTTACGCATACTCTGCTATTG-CTTCCAACA 358
Query 370 TCCCTATTTGTGTCCTCATATCAATTCTATGGATTTACATCGAAAAGCTCTTAATCTCTC 429
| || |||||| |||||||||||||||| ||| |||||||||||||| |||| || ||||
Sbjct 359 TACCAATTTGTTTCCTCATATCAATTCTCTGGCTTTACATCGAAAAGATCTTGATTTCTC 418
Query 430 TCGGTCAAGACCCTGACATCTCCAGAGTTGCTGGCTCCTACGCCTTTTGGCTCATACCGG 489
|||| ||||||||||| || || ||| | ||||||||||||||||||||||| |||||||
Sbjct 419 TCGGACAAGACCCTGAAATTTCAAGAATCGCTGGCTCCTACGCCTTTTGGCTTATACCGG 478
Query 490 CTTTGTTCG-CACATGCGTTTTTCATACCACTGACTCGGTTTCTGCTAGCACAAGGGTTG 548
|||| || | | || ||| || ||||||||||| | |||||||||||| |||||||||||
Sbjct 479 CTTTATTTGGC-CAAGCGATTGTCATACCACTGTCCCGGTTTCTGCTAACACAAGGGTTG 537
Query 549 GTTCTTCCCCTGCTCTACTCTACCCTGACCACTCTTTTGTTCCACATCCCTG-TTTGCTG 607
||| |||| ||||||| | || || ||||||| |||||||||||| | || |||| ||
Sbjct 538 GTTATTCCTCTGCTCTTCACTGCCGTGACCACCCTTTTGTTCCACGTTT-TGGTTTGTTG 596
Query 608 GACTTTTGTTTTCGCGCTTGGTCTGGGAAGCAATGGAGCTGCCATGGCTATTAGTGTGTC 667
|||||| |||||| | ||||||||||| | |||||| |||||||||||| ||||||||
Sbjct 597 GACTTTGGTTTTCTTGTTTGGTCTGGGATGTAATGGACCTGCCATGGCTACAAGTGTGTC 656
Query 668 TTTCTGGTTTTATGTTGTGATTCTCTCATGTTATGTGAGGTTCTCCAGCTCCTGCGACAA 727
|||||||||||| | |||||| ||||||||||||||||| ||||||||||| ||||| ||
Sbjct 657 TTTCTGGTTTTACGCTGTGATACTCTCATGTTATGTGAGATTCTCCAGCTCTTGCGAGAA 716
Query 728 GACTCGCGTATTTGTATCCAGTGATTTCGTGTCTTGTATCAGGCAGTTCTTCCATTTCGG 787
|||||||| |||||||||| | ||||| ||||||| ||||| |||||||||||| | |||
Sbjct 717 GACTCGCGGATTTGTATCCCGAGATTTTGTGTCTTCTATCAAGCAGTTCTTCCAATACGG 776
Query 788 AGTCCCATCCGCGGCAATGCTTTGCCTAGAATGGTGGCTGTTTGAGCTACTTATACTCTG 847
| ||||||| || |||||| |||| |||||||||||||| |||||| |||| ||||||||
Sbjct 777 AATCCCATCAGCTGCAATGATTTGTCTAGAATGGTGGCTATTTGAGATACTCATACTCTG 836
Query 848 CTCAGGTCTTCTCC-TAAACCCAAAACTCGAAACCTCTGTTCTTTCAATTTGTCTTACAA 906
|||||||||||||| ||| ||| |||||||| ||||||||||||||||||||||||||||
Sbjct 837 CTCAGGTCTTCTCCCTAA-CCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAA 895
Query 907 CAGCAAGTTTGCACTATGTGATCCCAGCTGGAGTCGCGGCGGCTGTGAGCACACGTGTGT 966
|| || ||||||||||||||| ||||||||||||| |||||||||||||||||||| |
Sbjct 896 TAGAAACTTTGCACTATGTGATTTCAGCTGGAGTCGCCGCGGCTGTGAGCACACGTGTAT 955
Query 967 CAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTGGCAGGGCTTT 1026
||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 956 CAAACAATTTGGGAGCTGGGAATCCTCAAGTTGCTAGGGTTTCAGTATTAGCAGGGCTTT 1015
Query 1027 GTCTCTGGCTGGTAGAATCAGTTTTCTCTACCACACTTCTCTTCACCTGCCGGAACATCA 1086
|||||||| | ||||| |||| ||||| || || |||||| ||||||||| |||||||||
Sbjct 1016 GTCTCTGGATAGTAGAGTCAGCTTTCTTTAGCATACTTCTATTCACCTGCAGGAACATCA 1075
Query 1087 TAGGCTACGCATTTAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGACCTAACTCCTT 1146
|||| |||||||| |||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 1076 TAGGATACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGTAGCTGACCTAACTCCTT 1135
Query 1147 TGCTCTGTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGTGTTGCTAGGG 1206
||||||| ||||||||| | |||||||| || || |||||||| ||||| ||||||||||
Sbjct 1136 TGCTCTGCCTCTCCTTTATCCTCGACGGCTTCACAGCAGTTCTAAATGGAGTTGCTAGGG 1195
Query 1207 GAAGTGGTTGGCAACACATTGGAGCTTTGAACAATG-TGGTAGCTTATTATCTCGTAGGA 1265
||||||||||||||||||||||||||| ||||||| || | |||||||||| ||||||
Sbjct 1196 GAAGTGGTTGGCAACACATTGGAGCTTGGAACAATACTGTTT-CTTATTATCTTGTAGGA 1254
Query 1266 GCTCCGGTTGGAGTTTACTTAGCTTTTAATCGTGAGTTTAACGGAAAAGGACTCTGGTGC 1325
||||| |||||| ||||||||||||| | ||||||||| |||||||||||||| ||||||
Sbjct 1255 GCTCCTGTTGGAATTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAGGACTGTGGTGC 1314
Query 1326 GGTGTTGTGGTCGGATCCGCTGTGCAAGCCATTATACTGTCTTTTGTCACATG-TTCCAT 1384
||||||||||| ||||| |||||||||||| ||||||| || |||||||| | ||||||
Sbjct 1315 GGTGTTGTGGTTGGATCTACTGTGCAAGCCACTATACTGGCTATTGTCACA-GCTTCCAT 1373
Query 1385 AAATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCGACTGAAAATAGATT 1444
||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||
Sbjct 1374 AAATTGGAAGGAACAGGCTGAGAAGGCAAGGAAGAGAATTGTCTCAACTGAAAACAGATT 1433
Query 1445 GGCTTGAAAGAAGGG-TGTTTCT 1466
||||| ||| || | |||||||
Sbjct 1434 GGCTT-AAACAAATGATGTTTCT 1455
> AT2G14661.1 | Symbols: | Pseudogene of AT2G04040; ATDTX1; antiporter/
multidrug efflux pump/ multidrug transporter/ transporter
| chr2:6273315-6274037 REVERSE LENGTH=561
Length=561
Score = 669 bits (362), Expect = 0.0
Identities = 492/555 (89%), Gaps = 8/555 (1%)
Strand=Plus/Plus
Query 898 GTCTTACAACAGCAAGTTTGCACTATGTGATCCCAGCTGGAGTCG-CGGCGGCTGTGAGC 956
||||||||| || || ||||||||||||||| |||||||||||| | || |||||||||
Sbjct 11 GTCTTACAATAGAAACTTTGCACTATGTGATTTCAGCTGGAGTCGTC-GCCGCTGTGAGC 69
Query 957 ACACGTGTGTCAAACAAATTGGGAGCTGGAAATCCTCAAGTTGCTAGGGTTTCAGTATTG 1016
|||||||| |||||||| ||||||| ||| |||||||||||||||||||| ||||||||
Sbjct 70 ACACGTGTATCAAACAATTTGGGAGTTGGGAATCCTCAAGTTGCTAGGGTCTCAGTATTA 129
Query 1017 GCAGGGCTTTGTCTCTGGCTGGTAGAATCAGTTTTCTCTACCACACTTCTCTTCACCTGC 1076
||| |||||||||||||| | ||||| |||| ||||| || || |||||| |||||||||
Sbjct 130 GCAAGGCTTTGTCTCTGGATAGTAGAGTCAGCTTTCTTTAGCATACTTCTATTCACCTGC 189
Query 1077 CGGAACATCATAGGCTACGCATTTAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTGAC 1136
||||||||||||| |||||||| |||||||||||||||||| |||||||||| || |||
Sbjct 190 AGGAACATCATAGGATACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGTCGCCGAC 249
Query 1137 CTAACTCCTTTGCTCTGTCTCTCCTTTGTTCTCGACGGATTTACCGCAGTTCTTAATGGT 1196
||||||||||||||||| ||||||||| | |||||||| ||||| ||||||||||||||
Sbjct 250 CTAACTCCTTTGCTCTGCCTCTCCTTTATCCTCGACGGCTTTACAGCAGTTCTTAATGG- 308
Query 1197 G-TTGCTAGGGGAAGTGGTTGGCAACACATTGGAGCTTTGAACAATG-TGGTAGCTTATT 1254
| |||||||||||||||||||||||||||||||||||| ||||||| || | ||||||
Sbjct 309 GATTGCTAGGGGAAGTGGTTGGCAACACATTGGAGCTTGGAACAATACTGTTT-CTTATT 367
Query 1255 ATCTCGTAGGAGCTCCGGTTGGAGTTTACTTAGCTTTTAATCGTGAGTTTAACGGAAAAG 1314
|||||||| ||||||| ||||| ||||||||||||| | ||||||||| ||||||||||
Sbjct 368 ATCTCGTATGAGCTCCTCTTGGAATTTACTTAGCTTTCAGTCGTGAGTTGAACGGAAAAG 427
Query 1315 GACTCTGGTGCGGTGTTGTGGTCGGATCCGCTGTGCAAGCCATTATACTGTCTTTTGTCA 1374
|| | ||||||||||||||||| ||||| |||||||||||| ||||||| || ||||||
Sbjct 428 GATTGTGGTGCGGTGTTGTGGTTGGATCTACTGTGCAAGCCACTATACTGGCTATTGTCA 487
Query 1375 CATG-TTCCATAAATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAATAATCTCGACT 1433
|| | ||||||||||||||||||||||||||||||||| ||||||||||| |||| |||
Sbjct 488 CA-GCTTCCATAAATTGGAAGGAACAGGCTGAGAAGGCAAGGAAGAGAATTGTCTCAACT 546
Query 1434 GAAAATAGATTGGCT 1448
|||||||||||||||
Sbjct 547 GAAAATAGATTGGCT 561
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72539787525
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5