BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930743
Length=938
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:14171... 1445 0.0
AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:14274... 1109 0.0
AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:92004... 1061 0.0
AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:92087... 1055 0.0
AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:92293... 983 0.0
AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:92383... 754 0.0
AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:92260... 689 0.0
AT5G26286.1 | Symbols: | pseudogene, hypothetical protein | ch... 121 2e-26
> AT2G04170.1 | Symbols: | TRAF-like family protein | chr2:1417182-1419247
REVERSE LENGTH=1576
Length=1576
Score = 1445 bits (782), Expect = 0.0
Identities = 876/921 (95%), Gaps = 7/921 (1%)
Strand=Plus/Plus
Query 17 AGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTTCTCCGT 76
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 454 AGGAATGTGGAGAGATGAGCGACCATCAAACAAGATACTGACAATAACAAGTTTCTCCGT 513
Query 77 GATTC-AAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTGGTTACAAAT 135
|| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 514 GA-TCAAAGGGAGAGGAGAACCCTACGAATCCTCGGTCTTTGAGGCCGGTGGTTACAAAT 572
Query 136 GGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATCATATTTCAC 195
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 573 GGAGATTAGTTTTGTATGTTAATGGTAATCAAAACGATGGTGGAAATAACCATATTTCAC 632
Query 196 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCAATGTTGAAC 255
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 633 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAAAGGCTGGGAAGTCAATGTTGAAC 692
Query 256 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACAGATGGAATAG 315
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 693 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGATTGTTAAAGATGGAATAG 752
Query 316 TGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTCCAA 375
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 753 TGAAACGATACAATGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTACAA 812
Query 376 CATTCCTTGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTTTTGGTGCTGAGA 435
||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 813 CATTCCTTGACACGAACGAAGGTTATCTTGAGCAGGACATTGCTTCTTTTGGTGCTGAGA 872
Query 436 TTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTCATATCAAACCCTCCAA 495
| |||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 873 TCTTCAGCGGCACAGCGGTCCAAGTACAAGAGAAAGTCACATTCATATCCAACCCTCCAA 932
Query 496 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAATTCTATTATT 555
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 933 ACAATGTTTTCACTTGGAAGATACTTCATTTCTCTAACTTGGAAGATAAATTCTATTACT 992
Query 556 CTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAACCCAAAAGGTACTG 615
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 993 CTGATGATTTTCTTGTTGAAGACCGATATTGGAGATTAGGATTTAACCCAAAAGGTACTG 1052
Query 616 GAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAAGGTCATAAGCCAAATG 675
| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |
Sbjct 1053 GTGATGGAAGATCACAAGCGATCCCAATCTTCCTATATGCTCAAGGCCATAAGCCAAACG 1112
Query 676 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAGGCTCCA 735
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1113 CAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCTCCA 1172
Query 736 ACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGCGATTATGGTGTGGGAG 795
||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1173 ACCACGCACAAATATATTCTGCAGCTTGGTACCCTACTCGAAGCGATTATGGTGTGGGAG 1232
Query 796 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTATAT-GGTGAAT 854
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1233 TTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTAT-TCGGTGAAT 1291
Query 855 GATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATCGTCTCCG-T 913
||| |||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct 1292 GATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATTGT-TCCCAT 1350
Query 914 TTAATTATCTCTACTTTTCTA 934
|||| |||||||| || ||||
Sbjct 1351 TTAAATATCTCTA-TTCTCTA 1370
> AT2G04190.1 | Symbols: | TRAF-like family protein | chr2:1427481-1430342
REVERSE LENGTH=1461
Length=1461
Score = 1109 bits (600), Expect = 0.0
Identities = 829/937 (88%), Gaps = 26/937 (3%)
Strand=Plus/Plus
Query 11 AGTGACAGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTT 70
||||||| ||| || |||||||||| |||| || | | ||||||||| ||||||| |||
Sbjct 439 AGTGACAAGAACGTTAAGAGATGAGCCACCATCACATAGGATACTGACAATAACAAATTT 498
Query 71 CTCCGTGATTCA-AGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGC---CGGTG 126
||||| |||| | ||||||| ||||||||||||||||||||| |||||||| ||
Sbjct 499 CTCCGAGATT-ATTGGGAGAGAAGAACCCTACGAATCCTCTGTTTTTGAGGCTTATTTTG 557
Query 127 GTTACAAATGGAGATTAG-TTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAAT 185
||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||
Sbjct 558 AACACAAATGGAGATT-GATTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAGTAAT 616
Query 186 CATATTTCACTTTACGTGAGGAT-CGAAGAGACAGAATC-TCTTCCAAGAGGCTGGGAAG 243
||||| ||||||||| ||||| | ||||||||||| ||| |||| | | | | | || ||
Sbjct 617 CATATCTCACTTTACTTGAGG-TCCGAAGAGACAG-ATCATCTTAC-ATACGAT-GGTAG 672
Query 244 --TCAATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGCAACG-CAAGTATTTGACTG 300
||||| ||| ||||||||||||||||||||||||||| ||| | ||||||| ||||||
Sbjct 673 TATCAATTTTGTACTCAAACTCTTTGTCTACAATGGGAAACAA-GACAAGTATCTGACTG 731
Query 301 TTACAGATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAAT 360
|||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||
Sbjct 732 TTACAGATGGAATACAGAAACGATACAACTATAAGAATAAAGAGTGGGGATACGGAAAAT 791
Query 361 TGATTCCTCTTCCAACATTCCTTGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTT 420
||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct 792 TGATTCCTCTTTCAACATTCCTTGACACGAGCCAAGGTTACCTTGAGCAAGACACTGCTT 851
Query 421 CTTTTGGTGCTGAGAT-TTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTC 479
|||||||||||||||| |||| | || ||||| | |||||||||||||||||||| |||
Sbjct 852 CTTTTGGTGCTGAGATCTTTC-TTTGTCCACCGATTCAGGTACAAGAGAAAGTCACATTC 910
Query 480 ATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 539
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 911 ATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACGTTGGAG 970
Query 540 GATAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTT 599
|||| | ||||||| |||||||||||||| |||||||||||||||||||| |||||| ||
Sbjct 971 GATATAGTCTATTACTCTGATGATTTTCTGGTTGAAGACCGATACTGGAGATTAGGAGTT 1030
Query 600 AACCCAAAAGGTACTGGAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1031 AACCCTAAAGGTACCGGAGATGGAAGATCACAAGCAATCAAAATCTTCCTATATGCTCAA 1090
Query 660 GGTCATAAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 719
|||||||||||||||||||||| | || |||||||||||| |||||||||||| |||||
Sbjct 1091 GGTCATAAGCCAAATGCAGTTGTTTCATCCACTTGGGGAGCCGTTAATCTGCGGGTAAAG 1150
Query 720 AATCAACGAGGCTCCAACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGC 779
||||||||| ||||||| ||| |||||||||||||||||||| |||||| | ||||| |
Sbjct 1151 AATCAACGAAGCTCCAATCACTCACAAATATATTCTGCAGCTTTGTACCCTATTCGAAAC 1210
Query 780 GATTATGGTGTGGGAGTTAACACTATCAT-ATCGTTAGCAGAATTCAATGATGCA-TCGA 837
|||||||||||||||||||||||| | || ||| ||||||||||| ||||||||| | ||
Sbjct 1211 GATTATGGTGTGGGAGTTAACACTGT-ATTATCATTAGCAGAATTAAATGATGCAGT-GA 1268
Query 838 AAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGA 897
||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1269 AAGAGTATTTGGTGAATGATTCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGA 1328
Query 898 CCAACATCGTCTCCG-TTTAATTATCTCTACTT-TTC 932
|||||||||| ||| ||||| ||||||||||| |||
Sbjct 1329 CCAACATCGT-TCCTATTTAAATATCTCTACTTGTTC 1364
> AT5G26260.1 | Symbols: | TRAF-like family protein | chr5:9200463-9202400
FORWARD LENGTH=1332
Length=1332
Score = 1061 bits (574), Expect = 0.0
Identities = 803/913 (88%), Gaps = 18/913 (2%)
Strand=Plus/Plus
Query 26 GAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTTCTCCGTGATTCAAGG 85
|||||| ||||||||| ||| |||||| |||| || ||||| ||||| |||||| ||||
Sbjct 194 GAGAGACGAGCGACCATCAAGTAAGATAGTGACAATCACAAGCTTCTCTGTGATT-AAGG 252
Query 86 -GAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTGGTTACAAATGGAGATTAG 144
|||||||||||||| ||||| ||| | |||||||| | |||||||||||||||||||
Sbjct 253 ACAGAGGAGAACCCTATGAATCATCTATTTTTGAGGCTGCCGGTTACAAATGGAGATTAG 312
Query 145 TTTTGTACGTGAATGGTAAT-CAAAACGATGGTGGAAATAATCATATTTCACTTTACGTG 203
||||||||||||| |||||| | ||| | ||| ||||||||||||||||||||||| |
Sbjct 313 TTTTGTACGTGAAGGGTAATCCGAAA-GGCGGTATAAATAATCATATTTCACTTTACGCG 371
Query 204 AGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCAATGTTGAACTCAAACTC 263
||||| |||||||||||| ||||||||||||| |||||||| |||||||| |||||||||
Sbjct 372 AGGATAGAAGAGACAGAAACTCTTCCAAGAGGGTGGGAAGTGAATGTTGATCTCAAACTC 431
Query 264 TTTGTCTACAATGGGAAG-CAACGCAAGTATTTGACTGTTACAGATGGAATAGTGAAACG 322
|||||| ||||| ||||| || | || |||||| ||||||||||||||| |||||| ||
Sbjct 432 TTTGTCCACAATCGGAAGTTAAAG-AAATATTTGTCTGTTACAGATGGAACAGTGAAGCG 490
Query 323 ATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTCCAACATTCCT 382
|||||||||||| |||||||||||||||| | | |||||||| ||||||||||||| ||
Sbjct 491 ATACAACGATGCAAAAAAAGAGTGGGGATTCACACAATTGATTTCTCTTCCAACATT-CT 549
Query 383 -TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTTTTGGTGCTGAGATTTTCA 441
|| ||||| |||| ||||||| ||||||||| |||||||||||||||||||| ||||
Sbjct 550 ACAACGCGAACGAAGGGTACCTTGTGCAGGACACAGCTTCTTTTGGTGCTGAGATCTTCA 609
Query 442 TCGGTACACCGGTCCAG--GTACAAGAGAAAGTCACGTTCATATCAAACCCTCCAAACAA 499
||| || ||| | ||| ||||||||||||||| |||||||||||||||||| ||||
Sbjct 610 TCGTTA-ACCCG-ACAGAAAAACAAGAGAAAGTCACATTCATATCAAACCCTCCAGACAA 667
Query 500 TGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAATTCTATTATTCTGA 559
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 668 TGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGATAAATTCTATTACTCTGA 727
Query 560 TGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAACCCAAAAGGTA-CTGG-A 617
|||||||||||||| ||||||||||||||| ||||||||||||| ||||| | ||||
Sbjct 728 TGATTTTCTTGTTGGAGACCGATACTGGAGACTAGGATTTAACCCGAAAGG-ATCTGGTG 786
Query 618 GATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAAGGTCATAAGCCAAATGCA 677
|| |||||| |||| ||| | ||||||||||||||||||||||| |||||| |||| |||
Sbjct 787 GA-GGAAGACCACATGCACTTCCAATCTTCCTATATGCTCAAGGCCATAAGGCAAACGCA 845
Query 678 GTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAGGCTCCAAC 737
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 846 GTTGTTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAACGAAGCTCCAAC 905
Query 738 CACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGCGATTATGGTGTGGGAGTT 797
||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 906 CACAAACAATTATATTCTGCAGCTTGGTACCCGATTCGAAGCGATTATGGTGTGGGAGTG 965
Query 798 AACACTATCATATCGTTAG-CAGAATTCAATGATGCATCGAAAGGGTATATGGTGAATGA 856
|||| ||| |||| | | | |||| | || |||||||| ||||||||||||||||||||
Sbjct 966 AACAATATAATATTGAT-GTCAGAGCTAAAAGATGCATCAAAAGGGTATATGGTGAATGA 1024
Query 857 TGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACATCGTCTCCGTTTA 916
||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 1025 TGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTGTGACAAACATAGTCTCCGTTTA 1084
Query 917 ATTATCTCTACTT 929
| |||| ||||||
Sbjct 1085 AATATCACTACTT 1097
> AT5G26280.1 | Symbols: | TRAF-like family protein | chr5:9208711-9210572
FORWARD LENGTH=1235
Length=1235
Score = 1055 bits (571), Expect = 0.0
Identities = 811/926 (88%), Gaps = 20/926 (2%)
Strand=Plus/Plus
Query 8 TGGAGTGACAGGA-ATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAA 66
|||||||||| || | || |||||| ||||||||| | | |||||| |||| |||||||
Sbjct 157 TGGAGTGACAAGAGA-GTTGAGAGAAGAGCGACCATCGAGTAAGATAGTGACAATAACAA 215
Query 67 GTTTCTCCGTGATTCAAGGGAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTG 126
| ||||| |||||| |||| |||||||||||||| ||||||||||| |||||||| | ||
Sbjct 216 GCTTCTCAGTGATTAAAGGCAGAGGAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTG 275
Query 127 GTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATC 186
|||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||
Sbjct 276 GTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATAAAAACGACGGTGGAAATGATC 335
Query 187 ATATTTCACTTTACGTGAGGATCGAAGAGACAGAA-TCTCTTCCAAGAGGCTGGGAAGTC 245
||||||| ||||||| ||||||||||||||| || ||||||||| ||| ||||||||
Sbjct 336 ATATTTCCCTTTACGCAAGGATCGAAGAGACA-AACTCTCTTCCATTAGGTTGGGAAGTG 394
Query 246 AATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACA 305
|||||||| ||||||||||||||| | |||||||||| || ||| |||||||||||||||
Sbjct 395 AATGTTGATCTCAAACTCTTTGTCCATAATGGGAAGCTACACAAATATTTGACTGTTACA 454
Query 306 GATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATT 365
||||| ||||||| ||||| ||| ||||||||||||| ||||| | |||| ||||||||
Sbjct 455 GATGGCTTAGTGAAGCGATATAACAATGCGAAAAAAGAATGGGGTTTCGGACAATTGATT 514
Query 366 CCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCTTCTT 423
|||| | ||||||| || || ||||| ||||||||||||| |||||||||| |||||
Sbjct 515 CCTCGAT-CAACATT-CTACAACGCGAACGAAGGTTACCTTGACCAGGACACTGGTTCTT 572
Query 424 TTGGTGCTGAGAT-TTTCATCGGTACACCGGTC-CAGGTACAAGAGAAAGTCACGTTCAT 481
||||||||||||| ||| || | || ||||| | || |||||||||||| || |||||
Sbjct 573 TTGGTGCTGAGATCTTT-ATTGTTAAACCGG-CTCAACAACAAGAGAAAGTTACATTCAT 630
Query 482 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGA 541
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 631 ATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCGTTTCTCTACCTTGGAAGA 690
Query 542 TAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAA 601
|||||||||||| || ||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 691 TAAATTCTATTACTCCGATGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTAA 750
Query 602 CCC-AAAAGGTACTGGA-GATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
||| ||| || | |||| || |||||| |||| ||| | ||||||||||||| |||||||
Sbjct 751 CCCGAAAGGGGA-TGGAGGA-GGAAGACCACATGCACTTCCAATCTTCCTATTTGCTCAA 808
Query 660 GGTCATAAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 719
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 GGCCATAAGGCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAG 868
Query 720 AATCAACGAGGCTCC-AACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAG 778
||||||||| | | | ||||| | ||||||||||||||||||||||||||| | | ||||
Sbjct 869 AATCAACGAAG-TACTAACCATAGACAAATATATTCTGCAGCTTGGTACCCGATTGGAAG 927
Query 779 CGATTATGGTGTGGGAGTTAACACTATCATA-TCGTTAGCAGAATTCAATGATGCATCGA 837
|| ||||||||||||||| |||| ||||||| | |||||| || || || |||||||| |
Sbjct 928 CGGTTATGGTGTGGGAGTGAACAATATCATACT-GTTAGCTGATTTAAACGATGCATCAA 986
Query 838 AAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGA 897
|||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |
Sbjct 987 AAGGATATTTGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTTAAGGTCTCTATAA 1046
Query 898 CCAACATCGTCTCCGTTTAATTATCT 923
||||||||||||||| |||| |||||
Sbjct 1047 CCAACATCGTCTCCGCTTAAATATCT 1072
> AT5G26300.1 | Symbols: | TRAF-like family protein | chr5:9229326-9231033
FORWARD LENGTH=1050
Length=1050
Score = 983 bits (532), Expect = 0.0
Identities = 789/912 (87%), Gaps = 21/912 (2%)
Strand=Plus/Plus
Query 8 TGGAGTGACAGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAG 67
||||| |||| || ||| |||||||||||||||| | | ||||| ||||| |||||||
Sbjct 144 TGGAGGGACAAGAGTGTTGAGAGATGAGCGACCATCGAGTAAGATTCTGACAATAACAAA 203
Query 68 TTTCTCCGTGATTCAAGGG-AGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGTG 126
||||| |||||| ||||| |||| ||||||||| ||||||||||| |||||||| | ||
Sbjct 204 CTTCTCTGTGATT-AAGGGCAGAGTAGAACCCTATGAATCCTCTGTTTTTGAGGCTGCTG 262
Query 127 GTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATAATC 186
|||||||||||||||| |||||||||||||||||||||| |||||| |||||||| |||
Sbjct 263 GTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATCCAAACGACAGTGGAAATGATC 322
Query 187 ATATTTCACTTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCA 246
|||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
Sbjct 323 ATATTTCACTTTACGTGAGGATCGAAGAGACAGAATATCTTCCAAGAGGGTGGGAAGTGA 382
Query 247 ATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGC-AACGCAAGTATTTGACTGTTACA 305
||||||| |||||||||||| || |||||||||||| || ||| |||||| || || ||
Sbjct 383 ATGTTGATCTCAAACTCTTTATCCACAATGGGAAGCTAA-ACAAATATTTGGCTATTTCA 441
Query 306 GATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGA-AAATTGAT 364
||||||| | |||| ||||||||||||||||| ||||||||||| |||| || || ||
Sbjct 442 GATGGAACATTGAAGTTATACAACGATGCGAAAAGAGAGTGGGGATTCGGACAACTT-AT 500
Query 365 TCCTCTTC-CAACATTCCTTGAC-ACGAAC-CAAGGTTACCTTGAGCAGGACACTGCTTC 421
||||| | |||||| | | || || || | || ||| |||||||||||| || |||
Sbjct 501 TCCTC-ACGTAACATT-C-T-ACAAC--ACGTATGGGTACATTGAGCAGGACATTGGTTC 554
Query 422 TTTTGGTGCTGAGATTTTCATCGGTACACCGGTC-CAGGTACAAGAGAAAGTCACGTTCA 480
||||||||||||||| ||||||| || ||||| | || ||||||||||||||| ||||
Sbjct 555 TTTTGGTGCTGAGATCTTCATCGTTAAACCGG-CTCAACAACAAGAGAAAGTCACATTCA 613
Query 481 TATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAG 540
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 614 TATCAAACCCTCCAACCAATGTTTTCACTTGGAAGATACTTCATTTCTCTATCTTGGAAG 673
Query 541 ATAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTA 600
| || |||||||| ||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct 674 ACAAGTTCTATTACTCTGACGATTTTCTCGTTGAAGACCGATACTGGAGACTAGGATTTA 733
Query 601 ACCCAAAAGGT-ACTGGAG-ATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCA 658
|||| ||||| | ||||| | |||||| || | ||| | |||||||| |||| ||||||
Sbjct 734 ACCCTAAAGGAGA-TGGAGGA-GGAAGACCATATGCACTTCCAATCTTTCTATTTGCTCA 791
Query 659 AGGTCATAAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAA 718
||| |||||| |||| |||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 792 AGGCCATAAGGCAAACGCAGTTGCTACAAACACTTGGGGAGCGGCTAATCTGCGGCTAAA 851
Query 719 GAATCAACGAGGCTCCAACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAG 778
|||||||||| || ||||||||| |||||||||| |||||||||||||||| | | ||||
Sbjct 852 GAATCAACGAAGCACCAACCACAGACAAATATATACTGCAGCTTGGTACCCGATTGGAAG 911
Query 779 CGATTATGGTGTGGGAGTTAACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAA 838
|| ||||||||||||||| |||| |||||||| ||||||||| || || ||||||||| |
Sbjct 912 CGGTTATGGTGTGGGAGTGAACAATATCATATTGTTAGCAGATTTAAACGATGCATCGCA 971
Query 839 AGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGAC 898
||| ||| |||||||| ||||||||||||||||||||| |||||| ||||| || |||||
Sbjct 972 AGGATATTTGGTGAATAATGCCATTATCTTTGAAGCTGCAATGGTTAAGGTTTCAGTGAC 1031
Query 899 CAACATCGTCTC 910
||||||||||||
Sbjct 1032 CAACATCGTCTC 1043
> AT5G26320.1 | Symbols: | TRAF-like family protein | chr5:9238310-9241236
FORWARD LENGTH=1059
Length=1059
Score = 754 bits (408), Expect = 0.0
Identities = 750/912 (82%), Gaps = 36/912 (4%)
Strand=Plus/Plus
Query 26 GAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAGTTTCTCCGTGATTCAAGG 85
|||||| ||||||||| | | |||||| |||| |||||||| |||||||||||| ||||
Sbjct 162 GAGAGAAGAGCGACCATCGAGTAAGATAGTGACAATAACAAGCTTCTCCGTGATT-AAGG 220
Query 86 G-AGAGGAGAACCCTACGAATCCTCTGTC-TTTGAGGCCGGTGGTTACAAATGGAGA-TT 142
| ||| ||| ||| ||||||||| | |||||||| | |||||||||||||||| ||
Sbjct 221 GCAGATCTGAAGCCTTTGAATCCTCT-ACTTTTGAGGCTGCTGGTTACAAATGGAGATTT 279
Query 143 AGTTTTGTACGTGAATGGTAATC-AAA--A---CGATGGTGGAAAT-AATCATATTTCAC 195
| | |||| |||||||||||||| ||| | |||||||||| || || |||| |||
Sbjct 280 A-TGTTGTTCGTGAATGGTAATCAAAACGACCCCGATGGTGGACATGAA-AATATGGCAC 337
Query 196 TTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAGAGGCTGGGAAGTCAATGTTGAAC 255
|||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||||| |
Sbjct 338 TTTACGTGGGGATCAAAGAGACCGAATCTTTTCCAAGAGGCTGGGAAGTCAATGTTGATC 397
Query 256 TCAAACTCTTTGTCTACAATGGGAAGCAACGCAAGTATTTGACTGTTACAGATGGAATAG 315
|||||||||||||| |||||| ||||| || |||||| ||||||||| ||||||||| ||
Sbjct 398 TCAAACTCTTTGTCCACAATGAGAAGCTACACAAGTACTTGACTGTTTCAGATGGAACAG 457
Query 316 TGAAACGATAC-AACGATGCGAAAAAAGAGTGGGGATACGGAAAATTGATTCCTCTTCCA 374
|||| || ||| || | |||||||| | | ||||||| |||||| ||||| |||| | ||
Sbjct 458 TGAAGCGGTACGAA-GCTGCGAAAACATATTGGGGATTCGGAAACTTGATCCCTCGTACA 516
Query 375 ACATTCCTTGACACGAACCAAGGTTAC--CTTGAGCAGGACAC-TGCTTCTTTTGGTGCT 431
||||| |||||| | ||| |||||||| |||| || || || | | |||||||||||
Sbjct 517 ACATTGCTTGACCCAAACGAAGGTTACATCTTG--CATGATACCTTAT-CTTTTGGTGCT 573
Query 432 GAGATTTTCATCGGTACA-CCGGTCC-AGGTACAAGAGAAAGTCACGTTCATATCAAACC 489
||||| | ||||| || | || | || | |||||||||| |||| |||||||||||||
Sbjct 574 GAGATATCCATCGTTA-ATCCAG-CCGAAAAACAAGAGAAAATCACATTCATATCAAACC 631
Query 490 CTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAAGATAAATTCT 549
|||| ||||||| ||||||||||||||||||| |||||| ||||||||| |||| ||||
Sbjct 632 CTCCGGACAATGTCTTCACTTGGAAGATACTTCGTTTCTCCACCTTGGAAAATAAGTTCT 691
Query 550 ATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTTAACCCAAAAG 609
|||| ||||| || ||||| |||| ||||||||||||||| |||||||||||||| ||||
Sbjct 692 ATTACTCTGACGAATTTCTCGTTGGAGACCGATACTGGAGATTAGGATTTAACCCGAAAG 751
Query 610 G-TA-CT-GGAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAAGG-TCAT 665
| || | ||||| |||| ||| ||| | ||||||| |||||||||||||| | ||
Sbjct 752 GGTATCAAGGAGA---AAGACCACGTGCACTTTCAATCTTTCTATATGCTCAAGGCT-AT 807
Query 666 AAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAAGAATCAA 725
||| |||| |||||| |||||||||||||||| |||||||||||| |||||||||||||
Sbjct 808 AAGGCAAACGCAGTTATTACAAACACTTGGGGATCGGTTAATCTGCAGTTAAAGAATCAA 867
Query 726 CGAGGCTCCAACCACAAACAAATATATTCTGCAGCTTGGTACCCCACTCGAAGCGATTAT 785
||| |||||||||||| ||| ||||| || |||||||| | | |||||||| ||||
Sbjct 868 CGAAGCTCCAACCACATTCAACTATATAGTGAAGCTTGGTGTGCGATTCGAAGCGGTTAT 927
Query 786 GGTGTGGGAGTTAACACTATCATATCGTTAGCAGAATT-CAATGATGCATCGAAAGGGTA 844
||| | | || |||| |||||||| ||||| ||| || ||| || |||| ||||| ||
Sbjct 928 GGTATTGAAGGGAACAGTATCATATTGTTAGAAGATTTACAAA-ATTCATCAAAAGGATA 986
Query 845 TATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACAT 904
| ||||||||||||| |||||||||||||||||| | || ||||||||||||||||| ||
Sbjct 987 TTTGGTGAATGATGCAATTATCTTTGAAGCTGAACTTGTTAAGGTCTCTGTGACCAATAT 1046
Query 905 CGTCTCCGTTTA 916
|| |||| |||
Sbjct 1047 TGTTTCCGCTTA 1058
> AT5G26290.1 | Symbols: | TRAF-like family protein | chr5:9226079-9227873
FORWARD LENGTH=1002
Length=1002
Score = 689 bits (373), Expect = 0.0
Identities = 749/923 (81%), Gaps = 56/923 (6%)
Strand=Plus/Plus
Query 8 TGGAGTGACAGGAATGTGGAGAGATGAGCGACCACCAAACAAGATACTGACTATAACAAG 67
|||||||||| || ||||||| ||||| |||||| | | ||||| || | ||||| ||
Sbjct 123 TGGAGTGACAAGAGTGTGGAGGGATGACCGACCATCGGATAAGATTCTTTCGATAACCAG 182
Query 68 TTTCTCCGTGATTCAAGG--GAGAGGAGAACCCTACGAATCCTCTGTCTTTGAGGCCGGT 125
||||| | ||| ||| |||| |||||||| ||||||||||| |||||||| | |
Sbjct 183 CTTCTCAATAATT--AGGACGAGACCTGAACCCTATGAATCCTCTGTTTTTGAGGCTGTT 240
Query 126 GGTTACAAATGGAGATTAGTTTTGTACGTGAATGGTAATCAAAACGATGGTGGAAATA-A 184
||||||||||||||||| ||||||||||||||||||||| |||| || |||||||| | |
Sbjct 241 GGTTACAAATGGAGATTGGTTTTGTACGTGAATGGTAATGAAAAGGACGGTGGAAA-AGA 299
Query 185 TCATATTTCACTTTACGTGAGGATCGAAGAGACAGAATCTCTTCCAAG-AGGCTGGGAAG 243
|||| |||||||||||| || ||||| |||||||||||||||||| || ||| |||||||
Sbjct 300 TCATGTTTCACTTTACGCGAAGATCGTAGAGACAGAATCTCTTCC-AGTAGGATGGGAAG 358
Query 244 TCAATGTTGAACTCAAACTCTTTGTCTACAATGGGAAGC-AACGCAAGTATTTGACTGTT 302
| |||||||| ||||||||||||||||||||||| |||| || ||| ||||||| ||||
Sbjct 359 TGAATGTTGATCTCAAACTCTTTGTCTACAATGGAAAGCTAA-ACAAATATTTGATTGTT 417
Query 303 ACAGATGGAATAGTGAAACGATACAACGATGCGAAAAAAGAGTGGGGATACGGA-AAATT 361
|| |||||||||||||||| |||||| |||||||| ||| |||||| || ||
Sbjct 418 AC---------AGTGAAACGATACAACAATGCGACAAAAGAGTTGGGTTACGGACAACTT 468
Query 362 GATTCCTC-TTCCAACATTCCT-TGACACGAACCAAGGTTACCTTGAGCAGGACACTGCT 419
||||||| | ||||||| || ||| |||| | || |||| |||||||||||||| |
Sbjct 469 -ATTCCTCAAT-CAACATT-CTACGACGGGAACGATGGGTACCGTGAGCAGGACACTGGT 525
Query 420 TCTTTTGGTGCTGAGATTTTCATCGGTACACCGGTCCAGGTACAAGAGAAAGTCACGTTC 479
| |||||||||||||| | ||||| || ||| | ||| | ||||||||||||| |||
Sbjct 526 ACATTTGGTGCTGAGATCTACATCGTTAAACCAGCCCAACAAAAAGAGAAAGTCACATTC 585
Query 480 ATATCAAACCCTCCAAACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 539
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 586 ATATCAAACCCTCCAGACAATGTTTTCACTTGGAAGATACTTCATTTCTCTACCTTGGAA 645
Query 540 GATAAATTCTATTATTCTGATGATTTTCTTGTTGAAGACCGATACTGGAGGTTAGGATTT 599
|||||| ||||| | ||| | || |||||||||| |||||||||||||| ||||||||
Sbjct 646 GATAAAGTCTATCAGTCTAACGAGTTTCTTGTTGGAGACCGATACTGGAAATTAGGATTA 705
Query 600 AACCCAAAAGGTACTGGAGATGGAAGATCACAAGCAATCCCAATCTTCCTATATGCTCAA 659
||||| ||||| | || | | | | |||||||||||||||||||||||
Sbjct 706 AACCCGAAAGG-A--GGC--T------T-A---G---TCCCAATCTTCCTATATGCTCAA 747
Query 660 GGTCAT-AAGCCAAATGCAGTTGCTACAAACACTTGGGGAGCGGTTAATCTGCGGTTAAA 718
|| | | ||| |||| ||||||| ||||| ||||| | |||| |||||||||||||||
Sbjct 748 GG-CTTTAAGGCAAACGCAGTTGTTACAACCACTTATGCAGCGACTAATCTGCGGTTAAA 806
Query 719 GAATCAACGAGGCTCCAACCACA-AACAA-ATATATTCTGCAGCTTGGTACCCCACTCGA 776
|||||||||| || ||||||| ||||| ||||| ||||| |||||||| | || |
Sbjct 807 GAATCAACGAAGCAGCAACCACGTAACAACATATA--CTGCATATTGGTACCTGATTCCA 864
Query 777 AGCG-ATTATGGTGTGGGAGTTAACACTATCATATCGTTAGCAGAAT-TCAATGATGCAT 834
|||| |||| ||| ||||||| |||||||| | ||||| |||| | | || |||||||
Sbjct 865 AGCGGATTA-GGTTTGGGAGTGAACACTAT-AC--CGTTATCAGA-TGTAAAAGATGCAT 919
Query 835 CGAAAGGGTATATGGTGAATGATGCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTG 894
||||||| ||| ||||||||||| |||||||| |||||| ||||||| | | |||||| |
Sbjct 920 CGAAAGGATATGTGGTGAATGATTCCATTATCATTGAAGTTGAAATGCTTACGGTCTCGG 979
Query 895 TGACCAACATCGTCTCCGTTTAA 917
|||| ||||| || |||| ||||
Sbjct 980 TGACGAACATTGTATCCGCTTAA 1002
> AT5G26286.1 | Symbols: | pseudogene, hypothetical protein |
chr5:9220057-9221658 FORWARD LENGTH=1602
Length=1602
Score = 121 bits (65), Expect = 2e-26
Identities = 93/107 (87%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 798 AACACTATCATATCGTTAGCAGAATTCAATGATGCATCGAAAGGGTATATGGTGAATGAT 857
||||||||||||| ||||| ||| || || || |||| ||||| ||| |||||||||||
Sbjct 1489 AACACTATCATATTGTTAGAAGATTTAAAAAATTCATCAAAAGGATATTTGGTGAATGAT 1548
Query 858 GCCATTATCTTTGAAGCTGAAATGGTGAAGGTCTCTGTGACCAACAT 904
||||||||||||||||||||| | || ||||||| ||||||||||||
Sbjct 1549 GCCATTATCTTTGAAGCTGAACTTGTTAAGGTCTTTGTGACCAACAT 1595
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45863776211
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5