BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg930751 Length=562 Score E Sequences producing significant alignments: (Bits) Value AT2G04340.1 | Symbols: | unknown protein; Has 24 Blast hits to... 857 0.0 > AT2G04340.1 | Symbols: | unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:1513512-1515540 FORWARD LENGTH=984 Length=984 Score = 857 bits (464), Expect = 0.0 Identities = 520/548 (95%), Gaps = 0/548 (0%) Strand=Plus/Plus Query 1 GAAGATCCCTGTTTCTGGTTATGATGTCTCGGCAGAGTCAGTTATTTACATTGCTTAAGA 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct 106 GAAGATCCCTGTTTCTGGTTATGATGTCTCGACAGAGTCAGTTATTTACATTGCTTAGGA 165 Query 61 GAAGGTTTCATTCCCCGTCTAGTGATGCCCCAACGGAGACCTTAAGAAAGAAGATAGCCG 120 ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 166 GAAGGTTTCATTCACCGTCTAATGATGCCCCAACGGAGACCTTAAGAAAGAAGATAGCCG 225 Query 121 ATTTGCAAAAGAGTAAGAAGCGAAGGAACCCAATAAAGAACCAGTTTCTAGTTGAGGTTC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 226 ATTTGCAAAAGAGTAAGAAGCGAAGGAACCCAATAAAGAACCAGTTTCTAGTTGAGGTTC 285 Query 181 CAGAATCAAGATCGTATTTGGACACAGCAACGATGCCTATGTTCCTCGCTGTGGTCGGTA 240 ||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||| Sbjct 286 CAGAATCAAGATCATATTTAGACACAGCAACGATGCCTATGTTCCTCGCTGTTGTAGGTA 345 Query 241 TCGCATTGTTTGCAAAGGTGTTAATGATGATCGATGATTCGAAATCCCAAGAAATGATTG 300 ||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 346 TCGCATTATTTGCAAAGGTGCTAATGATGATCGATGATTCGAAATCGCAAGAAATGATTG 405 Query 301 AACGAAAGATAAAAAATGCACCACCGGGACAAGGCACAGTGCGGATGATCGAGCGAGAGG 360 |||| |||||||| |||||||||| ||| |||||||| || || |||||||| || |||| Sbjct 406 AACGCAAGATAAAGAATGCACCACAGGGGCAAGGCACGGTACGAATGATCGATCGTGAGG 465 Query 361 AGTGGGATGAGTTTAGAGAAGTAAGGCCAAGAACACCTTTTGAGTCCAAGCTTGCTCGCC 420 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 466 AGTGGGATGAGTTTAGAGAAGTAAGGCCAAGAACACCTTTTGAGTCAAAGCTTGCTCGCC 525 Query 421 CAAATGCACAAATAAGAACTGGAGAACCTGTGCGCAAGGATGACTTGAAAAACTGGACAA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 526 CAAATGCACAAATAAGAACTGGAGAACCTGTGCGCAAGGATGACTTGAAAAACTGGACAA 585 Query 481 TAGATGTGCTAACAAACGCACTGGAACGAACCGAAGAAAGTGTTCGCCGCAGATCCAGTT 540 |||| ||||||||||| || || |||||||||||||||||||||||||| | ||||||| Sbjct 586 TAGACGTGCTAACAAATGCTCTTGAACGAACCGAAGAAAGTGTTCGCCGTGGTTCCAGTT 645 Query 541 AGATTTTC 548 |||||||| Sbjct 646 AGATTTTC 653 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26975736939 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5