BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930843
Length=2155
Score E
Sequences producing significant alignments: (Bits) Value
AT2G05230.1 | Symbols: | DNAJ heat shock N-terminal domain-con... 3349 0.0
AT2G05250.1 | Symbols: | DNAJ heat shock N-terminal domain-con... 3349 0.0
AT5G35753.1 | Symbols: | Domain of unknown function (DUF3444) ... 688 0.0
> AT2G05230.1 | Symbols: | DNAJ heat shock N-terminal domain-containing
protein | chr2:1899507-1902802 REVERSE LENGTH=2849
Length=2849
Score = 3349 bits (1813), Expect = 0.0
Identities = 2044/2153 (95%), Gaps = 26/2153 (1%)
Strand=Plus/Plus
Query 25 TACATGGAAGCTTACAGAGAGGAAGCTCTCAGAGTGAAACAAATCGCCGAGAGGAGATTT 84
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 415 TACATGGAAGCTTACAGAGAGGAAGCTCTCAGAGTGAAACAGATCGCTGAGAGGAGATTT 474
Query 85 GCGGAGAAAGATTTCACGAGCGCTAGGAGTTATGCGTTGAAAGCGAAGTCTTTGTTTCCT 144
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 475 GCGGAGAAAGATTTCACAAGCGCTAGGAGTTATGCGTTGAAAGCGAAGTCTTTGTTTCCT 534
Query 145 GATTTGGAAGGTGTGTCTCAGATGGTTGCTACGTTTGAAGTTTATTTAGCTTCTCAGACT 204
|||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 535 GATTTGGAAGGTTTATCTCAGATGGTTGCGACGTTTGAAGTTTATTTAGCTTCTCAGACT 594
Query 205 AGAAGTGGTGGTCAGATTGATTATTACGCGGTACTTGGACTGAAACCGTCGGCTGGGAAA 264
|||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 595 CGAAGCGGTGGTCAGATTGATTATTACGCGGTACTTGGACTGAAACCGTCTGCGGGGAAA 654
Query 265 AGAGAAGTGAAGAAGCAGTACAAGAAGATGGCTGTATTGCTTCATCCTGATAAGAACAAA 324
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 655 AGAGAAGTGAAGAAACAGTATAAGAAGATGGCTGTATTGCTTCATCCTGATAAGAACAAA 714
Query 325 TGCATTGGAGCTGATGGTGCATTTCATCTCATATCTGAAGCCTGGAGTTTCTTGTCTAAT 384
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 715 TGCATTGGAGCTGATGGTGCATTTCATCTCATATCTGAAGCTTGGAGTTTCTTGTCTAAT 774
Query 385 GAGTTTAATAAAAGCACTTTTTATTACAAAAGAAAGAAGCATATCGACTCCACGGTGGTT 444
|||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct 775 GAGTTTAATAAAAGCACTTTTTATTACAAAAGAAAGAAGCATATTGACTCCACTGAGGTT 834
Query 445 CAGAAGCACAGCACAGAGTACATG-C-----CTGGGAC----A--GGGACTGCGGTATTT 492
|||||||| ||||||||||||||| | ||||||| | |||||||| ||||||
Sbjct 835 CAGAAGCATAGCACAGAGTACATGCCTGGGACTGGGACTGGGACGGGGACTGCAGTATTT 894
Query 493 GATCGGTTTCCACCATCTTCAGAAAGGCTTGATACTTTCTGGACTGTATGCACATCTTGC 552
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 895 GATCGGTTTCCACCATCTTCAGAAAGGCTTGATACTTTCTGGACTGTATGCACCTCTTGC 954
Query 553 AAAGTTCAGTATGAGTACT-TGAGGAAGTATGTGAATAAGAGGCTTTCATGTAAGAACTG 611
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 955 AAAGTTCAGTATGAGTA-TCTGAGGAAGTATGTGAATAAGAGGCTTTCATGTAAGAACTG 1013
Query 612 TCGTGGAGCATTTATTGCTGTAGAAACTGGTCCAGCTCCTGTTAGTGCACCATTTCATTA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 TCGTGGAGCATTTATTGCTGTAGAAACTGGTCCAGCTCCTGTTAGTGCACCATTTCATTA 1073
Query 672 CACGCCTCCATCTCATGCGCCTCCGTCTCATGCGCCTCCATCTCATGCGCCTCCGAGTAA 731
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1074 CACGCCTCCATCCCATGCGCCTCCCTCTCATGCGCCTCCATCTCATGCGCCTCCGAGTAA 1133
Query 732 TGGCTATGGCGCACATGGTTATGATGCTATGTCACGCATGCCCACCAATTCCACGTATTT 791
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 TGGCTATGGTGCACATGGTTATGATGCTATGTCACGCATGCCCACCAATTCCACGTATTT 1193
Query 792 CTTAGGGCACTATCCTGGGCAAGGACATGGATATGATTATGGTACGAATGGTTCATATGA 851
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1194 CTTAGGCCACTATCCTGGGCAAGGACATGGATATGATTATAGTACGAATGGTTCATATGA 1253
Query 852 ATGGAGCTCGTACGCTGG---AACAACCTCCCCAGGGAATCTGGATTTGAAGCGTGTGTC 908
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1254 ATGGAGCTCGTACTCTGGAACAACAACCTCCCCAGGGAATCTGGATTTGAAGCGTGTGTC 1313
Query 909 CTCAGTGTCCAATGGGTATCCTTATAAGCACAGCAACTCAGTAGTCAGCGCGGGAATAAA 968
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1314 CTCAGTGTCTAATGGGTATCCTTATAAGCACAGCAACTCAGTAGTCAGCGGGGGAATAAA 1373
Query 969 TAAAGTCAAAGACGGTTCTAATGGGACATGCTCGAAGAAAAGCACA-CATGGAGGTCTGA 1027
|||||||||||| ||||||||||||||||||||||||||||||||| || || |||||||
Sbjct 1374 TAAAGTCAAAGATGGTTCTAATGGGACATGCTCGAAGAAAAGCACACCA-GGTGGTCTGA 1432
Query 1028 TATATCCTAATCCGCCCAGCATGTCTGCTCACACGACTG---TTAAGGTCGGCAGACCTG 1084
|||||||||||| | |||||||||||||||| ||| || |||||||||||||||||
Sbjct 1433 TATATCCTAATCAGATCAGCATGTCTGCTCACGCGAGTGCAAATAAGGTCGGCAGACCTG 1492
Query 1085 GGAAGAAAAGCAAAGTTTTTATGGAAGCTGCTGCTAATGGATTTGTTGAGAACCCTCTGA 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 GGAAGAAAAGCAAAGTTTTTATGGAAGCTGCTGCTAATGGATTTGTTGAGAACCCTCTGA 1552
Query 1145 AATCTGTTTCAGTATCAAAGACAACAAATGTGGATGCCAAAATGGAACAGGATTACAAAC 1204
|||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||
Sbjct 1553 GATCTGTTTCAGTATCAAAGACAGCGAATACAGATGCCAAAATGGATCAGGATTACAAAC 1612
Query 1205 TTCATCTCCAAAGTTCAACTAGACGTTGGTCTGCTGCATCAGTAATGGATACACGGACA- 1263
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1613 TTCATATCCAAAGTTCAACTAGACGTTGGTCTGCTGCATCAGTATTGGATACACGGA-AG 1671
Query 1264 CCTTTAATTCAAAAGGCCAGAACAGATATCAAGCAAAGATTGGAGATCATGAGATTGGCT 1323
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1672 CCCTTAATTCAAAAGGCCAGAACAGATATCAAGCAAAGATTGGAGATGATGAGATTGGCT 1731
Query 1324 TCAGAGGCAGCAGCGGCAGCAGAGGATGCGACACCACTTGATGAAAAAACTGTTATCTCC 1383
| ||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||
Sbjct 1732 TTAGAGGCAGCAGCGGCTGCAGAGGATGCAACACCCCTTGATGAAAAAACTGTTCTCTCC 1791
Query 1384 TGTAAGTTGGGAGATGTTAC-GGGACGCAAAACTAACGGGCCAATAACAGTTCCAGACTC 1442
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 1792 TGTAAGTTGGGAGATGTTACAGGG-CGCAAAACTAACGGGCCAATAACAGTTCCAGACTC 1850
Query 1443 TGATTTCCATGACTTTGATAAAAACAGATCGGAGGAATCCTTTGAGCCAAGGCAAATATG 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 TGATTTCCATGACTTTGATAAAAACAGATCGGAGGAATCCTTTGAGCCAAGGCAAATATG 1910
Query 1503 GGCAATTTATGATGAAGATGATGGTATGCCACGCCTATATTGTGTGGTTAGGGAAGTACT 1562
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1911 GGCAATTTATGATGAAGATGATGGTATGCCACGCCTATATTGTGTGGTGAGGGAAGTACT 1970
Query 1563 CTCGGTTCAACCCTTTAAGATCGACATTGCCTACTTAAGCTCCAAAACCGACATCGAGTT 1622
||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1971 CTCAGTTCAACCCTTTAAGATTGACATTGCCTACTTAAGCTCTAAAACCGACATCGAGTT 2030
Query 1623 TGGGTCAATGAAATGGGTACAATACGGGTTTACAAAGTCGTGTGGACATTTCAGGATACG 1682
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2031 TGGGTCAATGAAATGGGTACAATATGGGTTTACAAAGTCGTGTGGACATTTCAGGATACG 2090
Query 1683 AAACTCTGACATAGTTGACCAAGTTAACATCTTTTCGCATCTATTGAAAGGCAAGAAGAC 1742
||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 2091 AAACTCTGACATAGTAGACCATGTTAACATCTTTTCGCATCTTTTAAAAGGCAAGAAGAC 2150
Query 1743 AGGGAGAGGTGGTTGTGTTCGAATCTTCCCCACAACTGGGGAGATTTGGGCTGTCTACAA 1802
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 2151 AGGGAGAGGTGGTTGTGTTCGAATCTTCCCCACAGCTGGGGAGATTTGGGCCGTCTACAA 2210
Query 1803 AAACTGGTCACTAAACTGGGATGGATCAACACCGGACGAAGTGAGGCACCAATATGAAAT 1862
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2211 GAACTGGTCACTGAACTGGGACGGATCAACACCGGACGAAGTGAGGCACCAATATGAAAT 2270
Query 1863 GGTTGAGATTCTTGATGAGTATACTGAACAGTATGGTGTGTGTGTTGCCCCACTTATTAA 1922
||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||
Sbjct 2271 GGTCGAGATTCTTGATGAGTATACTGAACAGTATGGTGTGTGCGTTACCCCTCTTGTTAA 2330
Query 1923 ACTAGAGGGTTACAAAACCGTATATCACAGGAGCACGAGGGAGGAAAGTAAGAAGTGGAT 1982
| ||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct 2331 ATTAGAGGGCTACAAAACCGTGTATCACAGGAGCACAAGGGAGGACAGTAAGAAGTGGAT 2390
Query 1983 ACCGAGGTGCGAGATGTTGAGGTTCTCGCATCAAGTGCCGTCTTGGTTTCTTAAAGATGC 2042
||| ||||| || |||||| |||| || ||||||||||||||||||||||||||||||||
Sbjct 2391 ACCAAGGTGTGAAATGTTGCGGTTTTCACATCAAGTGCCGTCTTGGTTTCTTAAAGATGC 2450
Query 2043 AACCAGCGGCTTTCCCGGAAACTGTTGGGACTTAGATCCAGCTGCAATCCCCGAGGAGCT 2102
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2451 AACCAGCGGCTTTCCCGAAAACTGTTGGGACTTAGATCCAGCTGCAATCCCCGAGGAGCT 2510
Query 2103 GCTTCACATCGGAGCAGGAACCAATTGATTCCAGTGACCCTGTAAGAGAAAGA 2155
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2511 GCTTCACATCGGAGCAGGAACCAATTGATTTCAGTGACCCTGTAAGAGAAAGA 2563
> AT2G05250.1 | Symbols: | DNAJ heat shock N-terminal domain-containing
protein | chr2:1913338-1916623 REVERSE LENGTH=2839
Length=2839
Score = 3349 bits (1813), Expect = 0.0
Identities = 2044/2153 (95%), Gaps = 26/2153 (1%)
Strand=Plus/Plus
Query 25 TACATGGAAGCTTACAGAGAGGAAGCTCTCAGAGTGAAACAAATCGCCGAGAGGAGATTT 84
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 409 TACATGGAAGCTTACAGAGAGGAAGCTCTCAGAGTGAAACAGATCGCTGAGAGGAGATTT 468
Query 85 GCGGAGAAAGATTTCACGAGCGCTAGGAGTTATGCGTTGAAAGCGAAGTCTTTGTTTCCT 144
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 GCGGAGAAAGATTTCACAAGCGCTAGGAGTTATGCGTTGAAAGCGAAGTCTTTGTTTCCT 528
Query 145 GATTTGGAAGGTGTGTCTCAGATGGTTGCTACGTTTGAAGTTTATTTAGCTTCTCAGACT 204
|||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 529 GATTTGGAAGGTTTATCTCAGATGGTTGCGACGTTTGAAGTTTATTTAGCTTCTCAGACT 588
Query 205 AGAAGTGGTGGTCAGATTGATTATTACGCGGTACTTGGACTGAAACCGTCGGCTGGGAAA 264
|||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 589 CGAAGCGGTGGTCAGATTGATTATTACGCGGTACTTGGACTGAAACCGTCTGCGGGGAAA 648
Query 265 AGAGAAGTGAAGAAGCAGTACAAGAAGATGGCTGTATTGCTTCATCCTGATAAGAACAAA 324
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 649 AGAGAAGTGAAGAAACAGTATAAGAAGATGGCTGTATTGCTTCATCCTGATAAGAACAAA 708
Query 325 TGCATTGGAGCTGATGGTGCATTTCATCTCATATCTGAAGCCTGGAGTTTCTTGTCTAAT 384
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 709 TGCATTGGAGCTGATGGTGCATTTCATCTCATATCTGAAGCTTGGAGTTTCTTGTCTAAT 768
Query 385 GAGTTTAATAAAAGCACTTTTTATTACAAAAGAAAGAAGCATATCGACTCCACGGTGGTT 444
|||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct 769 GAGTTTAATAAAAGCACTTTTTATTACAAAAGAAAGAAGCATATTGACTCCACTGAGGTT 828
Query 445 CAGAAGCACAGCACAGAGTACATG-C-----CTGGGAC----A--GGGACTGCGGTATTT 492
|||||||| ||||||||||||||| | ||||||| | |||||||| ||||||
Sbjct 829 CAGAAGCATAGCACAGAGTACATGCCTGGGACTGGGACTGGGACGGGGACTGCAGTATTT 888
Query 493 GATCGGTTTCCACCATCTTCAGAAAGGCTTGATACTTTCTGGACTGTATGCACATCTTGC 552
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 889 GATCGGTTTCCACCATCTTCAGAAAGGCTTGATACTTTCTGGACTGTATGCACCTCTTGC 948
Query 553 AAAGTTCAGTATGAGTACT-TGAGGAAGTATGTGAATAAGAGGCTTTCATGTAAGAACTG 611
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 949 AAAGTTCAGTATGAGTA-TCTGAGGAAGTATGTGAATAAGAGGCTTTCATGTAAGAACTG 1007
Query 612 TCGTGGAGCATTTATTGCTGTAGAAACTGGTCCAGCTCCTGTTAGTGCACCATTTCATTA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1008 TCGTGGAGCATTTATTGCTGTAGAAACTGGTCCAGCTCCTGTTAGTGCACCATTTCATTA 1067
Query 672 CACGCCTCCATCTCATGCGCCTCCGTCTCATGCGCCTCCATCTCATGCGCCTCCGAGTAA 731
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1068 CACGCCTCCATCCCATGCGCCTCCCTCTCATGCGCCTCCATCTCATGCGCCTCCGAGTAA 1127
Query 732 TGGCTATGGCGCACATGGTTATGATGCTATGTCACGCATGCCCACCAATTCCACGTATTT 791
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1128 TGGCTATGGTGCACATGGTTATGATGCTATGTCACGCATGCCCACCAATTCCACGTATTT 1187
Query 792 CTTAGGGCACTATCCTGGGCAAGGACATGGATATGATTATGGTACGAATGGTTCATATGA 851
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1188 CTTAGGCCACTATCCTGGGCAAGGACATGGATATGATTATAGTACGAATGGTTCATATGA 1247
Query 852 ATGGAGCTCGTACGCTGG---AACAACCTCCCCAGGGAATCTGGATTTGAAGCGTGTGTC 908
||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1248 ATGGAGCTCGTACTCTGGAACAACAACCTCCCCAGGGAATCTGGATTTGAAGCGTGTGTC 1307
Query 909 CTCAGTGTCCAATGGGTATCCTTATAAGCACAGCAACTCAGTAGTCAGCGCGGGAATAAA 968
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1308 CTCAGTGTCTAATGGGTATCCTTATAAGCACAGCAACTCAGTAGTCAGCGGGGGAATAAA 1367
Query 969 TAAAGTCAAAGACGGTTCTAATGGGACATGCTCGAAGAAAAGCACA-CATGGAGGTCTGA 1027
|||||||||||| ||||||||||||||||||||||||||||||||| || || |||||||
Sbjct 1368 TAAAGTCAAAGATGGTTCTAATGGGACATGCTCGAAGAAAAGCACACCA-GGTGGTCTGA 1426
Query 1028 TATATCCTAATCCGCCCAGCATGTCTGCTCACACGACTG---TTAAGGTCGGCAGACCTG 1084
|||||||||||| | |||||||||||||||| ||| || |||||||||||||||||
Sbjct 1427 TATATCCTAATCAGATCAGCATGTCTGCTCACGCGAGTGCAAATAAGGTCGGCAGACCTG 1486
Query 1085 GGAAGAAAAGCAAAGTTTTTATGGAAGCTGCTGCTAATGGATTTGTTGAGAACCCTCTGA 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1487 GGAAGAAAAGCAAAGTTTTTATGGAAGCTGCTGCTAATGGATTTGTTGAGAACCCTCTGA 1546
Query 1145 AATCTGTTTCAGTATCAAAGACAACAAATGTGGATGCCAAAATGGAACAGGATTACAAAC 1204
|||||||||||||||||||||| | ||| |||||||||||||| |||||||||||||
Sbjct 1547 GATCTGTTTCAGTATCAAAGACAGCGAATACAGATGCCAAAATGGATCAGGATTACAAAC 1606
Query 1205 TTCATCTCCAAAGTTCAACTAGACGTTGGTCTGCTGCATCAGTAATGGATACACGGACA- 1263
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1607 TTCATATCCAAAGTTCAACTAGACGTTGGTCTGCTGCATCAGTATTGGATACACGGA-AG 1665
Query 1264 CCTTTAATTCAAAAGGCCAGAACAGATATCAAGCAAAGATTGGAGATCATGAGATTGGCT 1323
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1666 CCCTTAATTCAAAAGGCCAGAACAGATATCAAGCAAAGATTGGAGATGATGAGATTGGCT 1725
Query 1324 TCAGAGGCAGCAGCGGCAGCAGAGGATGCGACACCACTTGATGAAAAAACTGTTATCTCC 1383
| ||||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||
Sbjct 1726 TTAGAGGCAGCAGCGGCTGCAGAGGATGCAACACCCCTTGATGAAAAAACTGTTCTCTCC 1785
Query 1384 TGTAAGTTGGGAGATGTTAC-GGGACGCAAAACTAACGGGCCAATAACAGTTCCAGACTC 1442
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct 1786 TGTAAGTTGGGAGATGTTACAGGG-CGCAAAACTAACGGGCCAATAACAGTTCCAGACTC 1844
Query 1443 TGATTTCCATGACTTTGATAAAAACAGATCGGAGGAATCCTTTGAGCCAAGGCAAATATG 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1845 TGATTTCCATGACTTTGATAAAAACAGATCGGAGGAATCCTTTGAGCCAAGGCAAATATG 1904
Query 1503 GGCAATTTATGATGAAGATGATGGTATGCCACGCCTATATTGTGTGGTTAGGGAAGTACT 1562
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1905 GGCAATTTATGATGAAGATGATGGTATGCCACGCCTATATTGTGTGGTGAGGGAAGTACT 1964
Query 1563 CTCGGTTCAACCCTTTAAGATCGACATTGCCTACTTAAGCTCCAAAACCGACATCGAGTT 1622
||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1965 CTCAGTTCAACCCTTTAAGATTGACATTGCCTACTTAAGCTCTAAAACCGACATCGAGTT 2024
Query 1623 TGGGTCAATGAAATGGGTACAATACGGGTTTACAAAGTCGTGTGGACATTTCAGGATACG 1682
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2025 TGGGTCAATGAAATGGGTACAATATGGGTTTACAAAGTCGTGTGGACATTTCAGGATACG 2084
Query 1683 AAACTCTGACATAGTTGACCAAGTTAACATCTTTTCGCATCTATTGAAAGGCAAGAAGAC 1742
||||||||||||||| ||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 2085 AAACTCTGACATAGTAGACCATGTTAACATCTTTTCGCATCTTTTAAAAGGCAAGAAGAC 2144
Query 1743 AGGGAGAGGTGGTTGTGTTCGAATCTTCCCCACAACTGGGGAGATTTGGGCTGTCTACAA 1802
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 2145 AGGGAGAGGTGGTTGTGTTCGAATCTTCCCCACAGCTGGGGAGATTTGGGCCGTCTACAA 2204
Query 1803 AAACTGGTCACTAAACTGGGATGGATCAACACCGGACGAAGTGAGGCACCAATATGAAAT 1862
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2205 GAACTGGTCACTGAACTGGGACGGATCAACACCGGACGAAGTGAGGCACCAATATGAAAT 2264
Query 1863 GGTTGAGATTCTTGATGAGTATACTGAACAGTATGGTGTGTGTGTTGCCCCACTTATTAA 1922
||| |||||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||
Sbjct 2265 GGTCGAGATTCTTGATGAGTATACTGAACAGTATGGTGTGTGCGTTACCCCTCTTGTTAA 2324
Query 1923 ACTAGAGGGTTACAAAACCGTATATCACAGGAGCACGAGGGAGGAAAGTAAGAAGTGGAT 1982
| ||||||| ||||||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct 2325 ATTAGAGGGCTACAAAACCGTGTATCACAGGAGCACAAGGGAGGACAGTAAGAAGTGGAT 2384
Query 1983 ACCGAGGTGCGAGATGTTGAGGTTCTCGCATCAAGTGCCGTCTTGGTTTCTTAAAGATGC 2042
||| ||||| || |||||| |||| || ||||||||||||||||||||||||||||||||
Sbjct 2385 ACCAAGGTGTGAAATGTTGCGGTTTTCACATCAAGTGCCGTCTTGGTTTCTTAAAGATGC 2444
Query 2043 AACCAGCGGCTTTCCCGGAAACTGTTGGGACTTAGATCCAGCTGCAATCCCCGAGGAGCT 2102
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2445 AACCAGCGGCTTTCCCGAAAACTGTTGGGACTTAGATCCAGCTGCAATCCCCGAGGAGCT 2504
Query 2103 GCTTCACATCGGAGCAGGAACCAATTGATTCCAGTGACCCTGTAAGAGAAAGA 2155
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2505 GCTTCACATCGGAGCAGGAACCAATTGATTTCAGTGACCCTGTAAGAGAAAGA 2557
> AT5G35753.1 | Symbols: | Domain of unknown function (DUF3444)
| chr5:13922569-13925272 REVERSE LENGTH=1927
Length=1927
Score = 688 bits (372), Expect = 0.0
Identities = 607/721 (84%), Gaps = 14/721 (2%)
Strand=Plus/Plus
Query 1417 AACGGGCCAATAACAGTTCCAGACTCTGATTTCCATGACTTTGATAAAAACAGATCGGAG 1476
|||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||
Sbjct 1214 AACGGGCCAATAACAGTTCCAGACTCCGACTTCCATGACTTTGATAAAAATAGATTAGAG 1273
Query 1477 GAATCCTTTGAGCCAAGGCAAATATGGGCAATTTATGATGAAGATGATGGTATGCCACGC 1536
|| | ||| ||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1274 GAGTGCTTCGAGGCTAGGCAAATATGGGCAATTTATGATGAAGATGATGGTATGCCACGC 1333
Query 1537 CTATATTGTGTGGTTAGGGAAGTACTCTCGGTTCAACCCTTTAAGATCGACATTGCCTAC 1596
||||||| |||| |||||||||| || |||||||| |||||||| ||||| ||||||
Sbjct 1334 TTATATTGCATGGTCCGGGAAGTACTATCTGTTCAACCTTTTAAGATTGACATAGCCTAC 1393
Query 1597 TTAAGCTCCAAAACCGACATCGAGTTTGGGT-CAATGAAATGGGTACAATACGGGTTTAC 1655
|| ||||||||||| |||||||||||||| | ||||||||||||| || || ||||||||
Sbjct 1394 TTGAGCTCCAAAACTGACATCGAGTTTGG-TACAATGAAATGGGTGCAGTATGGGTTTAC 1452
Query 1656 AAAGTCGTGTGGACATTTCAGGATACGAAACT-CTGACATAGTTGACCAAGTTAACATCT 1714
|||||||||||||||||||||||||||||| | ||||||||||||| || |||||||| |
Sbjct 1453 AAAGTCGTGTGGACATTTCAGGATACGAAA-TACTGACATAGTTGATCATGTTAACATAT 1511
Query 1715 TTTCGCATCTATTGAAAGGCAAGAAGACAGGGAGAGGTGGTTGTGTTCGAATCTTCCCCA 1774
|||| ||||| || ||||||||||| ||||| ||||| ||||||||| | || ||||||
Sbjct 1512 TTTCCCATCTCTTAAAAGGCAAGAAAACAGGAAGAGGCGGTTGTGTTAGGATATTCCCC- 1570
Query 1775 CAA-CTGGGGAGATTTGGGCTGTCTACAAAAACTGGTCACTAAACTGGGATGGA-TCAAC 1832
||| | || || |||||| |||| ||||| |||||||||| ||||||| | | |||||
Sbjct 1571 CAAACCGGAGATATTTGGACTGTGTACAAGAACTGGTCACCAAACTGGAACA-ACTCAAC 1629
Query 1833 ACCGGACGAAGTGAGGCACCAATATGAAATGGTTGAGATTCTTGATGAGTATACTGAACA 1892
|| || ||||||||||||||||| ||||||||||||| |||||||| ||| |||||||
Sbjct 1630 TCCAGATGAAGTGAGGCACCAATACAAAATGGTTGAGATCCTTGATGAATATTCTGAACA 1689
Query 1893 GTATGGTGTGTGTGTTGCCCCACTTATTAAACTAGAGGGTTACAAAACCGTATATCACAG 1952
|| ||| || || | ||||| ||| | ||| |||| || ||||||||||| ||| |||
Sbjct 1690 GTTTGGGGTTTGCATCGCCCCGCTTGTGAAAGTAGATGGATACAAAACCGTGTATTGCAG 1749
Query 1953 GAGC-ACGAGGGAGGAAAGTAAGAAGTGGATACCGAGGTGCGAGATGTTGAGGTTCTCGC 2011
||| | ||| |||| || ||||| ||||||||| || | |||||| || | || ||||
Sbjct 1750 GAGAGATAAGG-AGGAGAGCAAGAAATGGATACCGCGGAGAGAGATGCTGCGATTTTCGC 1808
Query 2012 ATCAAGTGCCGTCTTGGTTTCTTAAAGATGCAACCAGCGGCTTT-CCCGGAAACTGTTGG 2070
|||||||||| ||| ||||||||||||| | ||| | || | | |||||||||||||||
Sbjct 1809 ATCAAGTGCCATCTCGGTTTCTTAAAGAAGAAACTTGTGG-TGTGCCCGGAAACTGTTGG 1867
Query 2071 GACTTAGATCCAGCTGCAATCCCCGAGGAGCTGCTTCACA-TCGGAGCAGGAACCAATTG 2129
|||||||| ||| |||| || || || ||| ||||||||| | ||||||||||| ||||
Sbjct 1868 GACTTAGACCCATCTGCTATACCAGAAGAGTTGCTTCACAAT-GGAGCAGGAACTGATTG 1926
Query 2130 A 2130
|
Sbjct 1927 A 1927
Score = 220 bits (119), Expect = 3e-56
Identities = 162/182 (89%), Gaps = 5/182 (3%)
Strand=Plus/Plus
Query 509 CTTCAG-AAAGGCTTGATACTTTCTGGACTGTATGCACATCTTGCAAAGTTCAGTATGAG 567
|||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 410 CTTCAGAAAAGGCTTGATACTTTCTGGACTGTATGCACATATTGCAAGGTTCAGTATGAG 469
Query 568 TA-CTTGAGGAAGTATGTGAATAAGAGGCTT-TCATGTAAGAACTGTCGTGGAGCATTTA 625
|| || | |||||||||||||||||||| || |||||||||||||| || || |||||||
Sbjct 470 TATCT-GCGGAAGTATGTGAATAAGAGG-TTGTCATGTAAGAACTGCCGAGGTGCATTTA 527
Query 626 TTGCTGTAGAAACTGGTCCAGCTCCTGTTAGTGCACCATTTCATTACACGCCTCCATCTC 685
||||||| || ||||| || ||||||||||||||| || |||| || ||||||||||||
Sbjct 528 TTGCTGTGGAGACTGGGCCGGCTCCTGTTAGTGCATCACTTCAGTATGCGCCTCCATCTC 587
Query 686 AT 687
||
Sbjct 588 AT 589
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106876960305
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5