BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg930906
Length=1215
Score E
Sequences producing significant alignments: (Bits) Value
AT2G05990.1 | Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fol... 1962 0.0
> AT2G05990.1 | Symbols: MOD1, ENR1 | NAD(P)-binding Rossmann-fold
superfamily protein | chr2:2322258-2325146 FORWARD LENGTH=1606
Length=1606
Score = 1962 bits (1062), Expect = 0.0
Identities = 1165/1216 (96%), Gaps = 2/1216 (0%)
Strand=Plus/Plus
Query 1 AAATTAGAAAGGTTGTGAGAATGGCGGCTACAGCAGCTTCAAGCTTGCAAATTGCTACAC 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 135 AAATTAGAAAGGTTGTGAGAATGGCGGCTACAGCAGCTTCAAGCTTACAAATTGCTACAC 194
Query 61 GAAGGCCGAGCATTTCTTCGCCTTGCAAAGTTCTCAAAGCAGGGACCTACATTGTTGGTG 120
||||||||||||| ||||||||| ||||| |||| |||||||| ||||||||||||||||
Sbjct 195 GAAGGCCGAGCATGTCTTCGCCTAGCAAAATTCTTAAAGCAGGAACCTACATTGTTGGTG 254
Query 121 CCAATCCTGGAAACGCTTCATGGGATAAACTTTCATGCACTCGCCATTTATCGAACCTTG 180
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 255 CCAATCCTGGAAACGCTTCATGGGATAAACTTTCATGCACTCGCCAATTATCAAACCTTG 314
Query 181 GATGTTTGAGAAACAACAGTGCTGTTCCAACTTCT-AGAAGACCCTTTTCTTTTTCCACA 239
|||||||||||||| |||||||||||||||||| | || |||||||||||||||||||||
Sbjct 315 GATGTTTGAGAAACCACAGTGCTGTTCCAACTTGTAAG-AGACCCTTTTCTTTTTCCACA 373
Query 240 AAGGCGATGTCTGAGTCCAGTGAAAATAAGGCTCCTTCAGGGCTTCCAATTGATTTGAGA 299
| ||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 374 AGGGCAATGTCTGAATCCAGTGAAAACAAGGCTCCTTCAGGGCTTCCAATTGATTTGAGA 433
Query 300 GGGAAAAGAGCTTTCATTGCTGGTATAGCTGATGATAATGGATATGGTTGGGCCATAGCA 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 434 GGGAAAAGAGCTTTCATTGCTGGTATAGCTGATGATAATGGCTATGGTTGGGCCATAGCA 493
Query 360 AAATCTCTTGCTGCTGCTGGAGCTGAAATATTGGTTGGGACATGGGTTCCTGCACTTAAT 419
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 494 AAATCTCTTGCTGCTGCTGGAGCTGAAATATTGGTTGGGACTTGGGTTCCTGCACTTAAT 553
Query 420 ATTTTTGAGACAAGCTTGAGACGTGGAAAATTTGACCAGTCACGAGTTTTGCCGGACGGG 479
|| ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 554 ATATTTGAGACAAGCTTGAGACGTGGAAAATTCGACCAGTCACGAGTGTTGCCTGACGGG 613
Query 480 TCATTGATGGAGATTAAGAAGGTTTATGCTTTGGATGCTGTGTTTGACAATCCTGAAGAT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 614 TCATTGATGGAGATTAAGAAGGTTTATGCTTTGGATGCTGTGTTTGACAATCCTGAAGAT 673
Query 540 GTGCCTGAAGATGTGAAAACGAATAAGCGATATGCAGGATCATCAAACTGGACCGTACAG 599
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 674 GTGCCTGAAGATGTGAAAACGAATAAGCGATATGCAGGATCGTCAAACTGGACCGTACAG 733
Query 600 GAAGCTGCTGAGTGTGTGAAAAAAGATTTTGGAAGCATCGACATTCTTGTCCATTCCCTT 659
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 734 GAAGCTGCTGAATGTGTGAAAAAAGATTTTGGAAGCATTGACATTCTTGTCCATTCCCTT 793
Query 660 GCAAATGGGCCAGAGGTTAGCAAACCTCTTCTGGAGACATCGAGGAAAGGCTATCTCGCT 719
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 794 GCAAATGGCCCAGAGGTTAGCAAACCTCTTCTGGAGACATCAAGGAAAGGCTATCTCGCT 853
Query 720 GCTATCTCTGCTTCGAGTTACTCCTTTGTTTCCTTGCTCAGGCATTTTCTGCCAATTATG 779
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 854 GCTATCTCTGCTTCGAGTTACTCCTTTGTTTCCTTGCTGAGGCATTTTCTGCCAATTATG 913
Query 780 AACCCAGGAGGTGCTTCGATATCTCTTACTTACATTGCCTCTGAAAGGATCATTCCTGGG 839
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 914 AACCCAGGAGGTGCTTCAATATCTCTTACTTACATTGCCTCTGAAAGAATCATTCCTGGG 973
Query 840 TATGGTGGAGGTATGAGTTCTGCCAAAGCTGCACTAGAGAGTGATACAAGGGTGCTTGCA 899
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 974 TATGGTGGAGGTATGAGTTCTGCCAAAGCTGCACTAGAGAGTGACACACGGGTGCTTGCA 1033
Query 900 TATGAAGCCGGAAGGAAATCAAACATTAGGGTCAACACCATCTCTGCTGGTCCTTTGGGA 959
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1034 TATGAAGCTGGAAGGAAATCAAACATTAGGGTCAACACCATCTCTGCGGGTCCTTTGGGA 1093
Query 960 AGCCGAGCAGCGAAAGCAATCGGGTTCATTGACACCATGATTGAGTATTCCTACAATAAT 1019
||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct 1094 AGCCGAGCAGCAAAAGCCATTGGGTTCATAGACACCATGATTGAGTATTCCTACAATAAT 1153
Query 1020 GGGCCTATTCAGAAAACATTGACCGCAGATGAAGTTGGGAATGCAGCAGCCTTCTTGGCA 1079
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 GGGCCTATTCAGAAAACACTGACCGCAGATGAAGTTGGGAATGCAGCAGCCTTCTTGGCA 1213
Query 1080 TCGCCACTGGCCTCTGCTATTACCGGTGCTACCATCTATGTGGACAATGGCTTGAATGCA 1139
|| ||| |||||||||| || |||||||| ||||| |||||||||||||| |||||||||
Sbjct 1214 TCTCCATTGGCCTCTGCCATAACCGGTGCAACCATATATGTGGACAATGGTTTGAATGCA 1273
Query 1140 ATGGGCGTTGCACTAGACAGCCCGGTGTTCAAAGACCTCAACAGCAAGAATTAGGGTCTT 1199
|||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1274 ATGGGCGTTGCACTGGACAGCCCGGTGTTCAAAGACCTTAACAGCAAGAATTAGAGTCTT 1333
Query 1200 GATCGGCGACTGAACT 1215
||||| |||||| |||
Sbjct 1334 GATCGACGACTGGACT 1349
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59688448005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5