BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg930945

Length=518
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G06925.1 | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | Phospholipas...   857    0.0  


> AT2G06925.1 | Symbols: ATSPLA2-ALPHA, PLA2-ALPHA | Phospholipase 
A2 family protein | chr2:2842353-2843301 REVERSE LENGTH=658
Length=658

 Score =  857 bits (464),  Expect = 0.0
 Identities = 501/519 (97%), Gaps = 1/519 (0%)
 Strand=Plus/Plus

Query  1    ACCAAAACCAAC-AATATATTCTTCTCACTTTTCGAGCTTTCCTGTTCAACTATGGCGGC  59
            |||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct  38   ACCAAAACCAACAAATATATTCTTCTCACTTTCCGAGCTTTCCAGTTCAACTATGGCGGC  97

Query  60   TCCGATCATActtttctctttccttttcttcttctctgtctccgtctctGCACTTAACGT  119
            ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct  98   TCCGATCATACTTTTCTCTTTCCTTTTATTCTTCTCTGTCTCTGTCTCGGCACTTAACGT  157

Query  120  CGGTGTTCAGCTCATACATCCATCCATTACCTTGACTAAAGAATGTAGCCGGAAATGTGA  179
            ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct  158  CGGTGTTCAGCTCATACATCCCTCCATTTCCTTGACTAAAGAATGTAGCCGGAAATGTGA  217

Query  180  ATCAGAGTTCTGTTCAGTGCCTCCATTTTTGAGGTATGGGAAGTACTGTGGACTACTATA  239
            ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct  218  ATCAGAGTTTTGTTCAGTGCCTCCATTTCTGAGGTATGGGAAGTACTGTGGACTACTTTA  277

Query  240  CAGTGGATGTCCTGGGGAGAGACCTTGTGATGGTCTTGATTCTTGTTGCATGAAACATGA  299
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  278  CAGTGGATGTCCTGGTGAGAGACCTTGTGATGGTCTTGATTCTTGTTGCATGAAACATGA  337

Query  300  TGCTTGTGTCCAATCAAAGAATAATGATTATTTAAGCCAAGAGTGTAGTCAGAAGTTCAT  359
            ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  338  TGCTTGTGTCCAATCCAAGAATAATGATTATCTAAGCCAAGAGTGTAGTCAGAAGTTCAT  397

Query  360  AAACTGCATGAACAATTTCAGCCAGAAGAAGCAACCGACGTTCAAAGGTAACAAATGTGA  419
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct  398  TAACTGCATGAACAATTTCAGCCAGAAGAAGCAACCGACGTTCAAAGGTAACAAATGCGA  457

Query  420  CGCCGATGAAGTTATTGATGTCATCTCCATTGTCATGGAAGCTGCTCTTATCGCCGGCAA  479
            ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  458  CGCTGATGAAGTGATTGATGTCATCTCCATTGTCATGGAAGCTGCTCTTATCGCCGGCAA  517

Query  480  AGTCCTCAAGAAACCCTAACTATTTATATATATTTTTCT  518
            |||||||||||||||||||||||||||||||||||||||
Sbjct  518  AGTCCTCAAGAAACCCTAACTATTTATATATATTTTTCT  556



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 24765434471


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5