BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931002 Length=733 Score E Sequences producing significant alignments: (Bits) Value ATMG00960.1 | Symbols: CCB203 | Cytochrome C assembly protein |... 1092 0.0 AT2G07768.1 | Symbols: | Cytochrome C assembly protein | chr2:... 747 0.0 > ATMG00960.1 | Symbols: CCB203 | Cytochrome C assembly protein | chrM:256865-257476 REVERSE LENGTH=612 Length=612 Score = 1092 bits (591), Expect = 0.0 Identities = 591/591 (100%), Gaps = 0/591 (0%) Strand=Plus/Plus Query 123 GCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCCTCTTTGTTGGACC 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 22 GCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCCTCTTTGTTGGACC 81 Query 183 GCCGGCGCGAACACAGTGGTCTCTGATCAGGACCAGGAACCAATTCGAATTTGGATCTTG 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 82 GCCGGCGCGAACACAGTGGTCTCTGATCAGGACCAGGAACCAATTCGAATTTGGATCTTG 141 Query 243 ACATGTTGGTGGTTTTTAACCGTAGGCATCTTGCCAGGAAGTTGGTGGGCTTATCATGAA 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 142 ACATGTTGGTGGTTTTTAACCGTAGGCATCTTGCCAGGAAGTTGGTGGGCTTATCATGAA 201 Query 303 TTAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTAGAAAATGCTTCTTTTATGCCTCGG 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 202 TTAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTAGAAAATGCTTCTTTTATGCCTCGG 261 Query 363 GTATTAGCCACAGCTCGTATTCATTCTGTAATTTTACCCCTTCTTCATTCTTGGACCTCG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 GTATTAGCCACAGCTCGTATTCATTCTGTAATTTTACCCCTTCTTCATTCTTGGACCTCG 321 Query 423 TTTCTTAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGA 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 TTTCTTAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGA 381 Query 483 TTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGTGG 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 TTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGTGG 441 Query 543 TTCTTCCTTCTAATGACCGGCATATCTATGATTCTTTTCTACCAGATGAAGCAGCAGGCA 602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 TTCTTCCTTCTAATGACCGGCATATCTATGATTCTTTTCTACCAGATGAAGCAGCAGGCA 501 Query 603 TCGGTCCGTAGAACGTATAAAAAAGAGATGGTTGTGGCGCGAAGTACTCTTGTGCATCTA 662 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 502 TCGGTCCGTAGAACGTATAAAAAAGAGATGGTTGTGGCGCGAAGTACTCTTGTGCATCTA 561 Query 663 CGTCACTCGGCTCGCGCGCAACCCCGCCCCGTTATGTTATGGAAGAATTGA 713 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 562 CGTCACTCGGCTCGCGCGCAACCCCGCCCCGTTATGTTATGGAAGAATTGA 612 > AT2G07768.1 | Symbols: | Cytochrome C assembly protein | chr2:3273584-3274154 FORWARD LENGTH=465 Length=465 Score = 747 bits (404), Expect = 0.0 Identities = 407/408 (99%), Gaps = 1/408 (0%) Strand=Plus/Plus Query 306 GGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTAGAAAATGCTTCTTTTATGCCTCGGGTA 365 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 59 GGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTAG-AAATGCTTCTTTTATGCCTCGGGTA 117 Query 366 TTAGCCACAGCTCGTATTCATTCTGTAATTTTACCCCTTCTTCATTCTTGGACCTCGTTT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 TTAGCCACAGCTCGTATTCATTCTGTAATTTTACCCCTTCTTCATTCTTGGACCTCGTTT 177 Query 426 CTTAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGATTG 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178 CTTAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGATTG 237 Query 486 CTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGTGGTTC 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 CTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGTGGTTC 297 Query 546 TTCCTTCTAATGACCGGCATATCTATGATTCTTTTCTACCAGATGAAGCAGCAGGCATCG 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 298 TTCCTTCTAATGACCGGCATATCTATGATTCTTTTCTACCAGATGAAGCAGCAGGCATCG 357 Query 606 GTCCGTAGAACGTATAAAAAAGAGATGGTTGTGGCGCGAAGTACTCTTGTGCATCTACGT 665 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 GTCCGTAGAACGTATAAAAAAGAGATGGTTGTGGCGCGAAGTACTCTTGTGCATCTACGT 417 Query 666 CACTCGGCTCGCGCGCAACCCCGCCCCGTTATGTTATGGAAGAATTGA 713 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 CACTCGGCTCGCGCGCAACCCCGCCCCGTTATGTTATGGAAGAATTGA 465 Score = 115 bits (62), Expect = 6e-25 Identities = 62/62 (100%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 142 ATGGAAAGAAAGAGACCACTACTTCGCCTCTTTGTTGGACCGCCGGCGCGAACACAGTGG 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGAAAGAAAGAGACCACTACTTCGCCTCTTTGTTGGACCGCCGGCGCGAACACAGTGG 60 Query 202 TC 203 || Sbjct 61 TC 62 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35565776076 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5