BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931135 Length=746 Score E Sequences producing significant alignments: (Bits) Value AT2G14095.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1166 0.0 > AT2G14095.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr2:5932383-5933791 REVERSE LENGTH=867 Length=867 Score = 1166 bits (631), Expect = 0.0 Identities = 712/751 (95%), Gaps = 5/751 (1%) Strand=Plus/Plus Query 1 TTGATTTCATAAACCGGATTGAAAATGTATCTAAGTCGGAGAATACAGAGCGGAGGTTTT 60 ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 19 TTGATTTCATAAAACGGATTGATGATGTATCTAAGTCGGAGAATGCAGAGCGGAGGTTTT 78 Query 61 GCGGTCTATAGGCAGGGCCTTGCAGAGGTCTTACAAATATACAACAAAGTTGAGAGGAAG 120 ||||| ||| | ||||||||||| || |||||||||||||| ||||||||||||||||| Sbjct 79 GCGGTGTATCGACAGGGCCTTGCGGAAGTCTTACAAATATATAACAAAGTTGAGAGGAAA 138 Query 121 ACAACTTTGAATCCATATCCGGCGATTGTTCGATTTGGAAGAGACTATCATAACCAAATG 180 ||| || ||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct 139 ACATCTATGAATCCATGTCCGGCGATTATTCGATTTGGAAGAGACTATCATAACCAAATA 198 Query 181 TGTCCACAAGGTCTCAAGTTATCAAATCCGCTTAATGCCGGGAGATACTTTAGTAATGGT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 199 TGTCCACAAGGTCTCAAGTTATCAAATCCGCTTAATGCCGGGAGATACTTTAGTAATGTT 258 Query 241 TCCAACAACTCCAATATGCAACCTTCTCCTCCAAACCAGTGGTTTAATTTT---TCTTGG 297 ||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 259 TCCAATGACTCCAAGATGCAACCTTCTCCTCCAAACCAGTGGTTTAATTTTCCCTCTTGG 318 Query 298 GGAAGATGGGTTATTGGTTCTGCGATATCCTTAGTGTTATCTTTCTGGAACAACGAAAGG 357 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 GGAAGATGGGTTATAGGTTCTGCGATATCCTTAGTGTTATCTTTCTGGAACAACGAAAGG 378 Query 358 ATACAAAAACTGAAACGGATCGAAGGAGAGGCAGAGTTGGTAGTGGAAGGGGTAGAGGCT 417 |||||||||||||||| || ||||||||||| |||||||| |||||||||||||||||| Sbjct 379 TTACAAAAACTGAAACGAATAGAAGGAGAGGCGGAGTTGGTTGTGGAAGGGGTAGAGGCT 438 Query 418 GTAGCAGAAATGGTGGAGAAAGTAGCGACGGCGACTGACGAAATGGCTGAAGAAATGGCA 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 GTAGCAGAAATGGTGGAGAAAGTAGCGACGGCGACTGACGAAATGGCTGAAGAAATGGCA 498 Query 478 GAGAAACTGCCTGAGAAAAATAAACTAAAACAAGTGGCTTTGGTTCTAGAACATATTTCA 537 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 499 GAGAAACTGCCTGAGAAAAATAAACTAAAACAAGTGGCTTTGGTTCTAGAACACATTTCA 558 Query 538 GAGGTCGCTGCCCATGAAGCACATTTAACCCAAGAGTTCCTTCACAAGGTGGAAAAAGTC 597 ||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 559 GAGGTTGCTGCCCATGAAGCACATCTAACCCAAGATTTCCTTCACAAGGTGGAAAAAGTC 618 Query 598 ACACAAGATATAGATGACTTGGAGGCAATGATAAAGCCTTTGATAGACAAAAAAGTGGCA 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 619 ACACAAGATATAGATGACTTGGAGGCAATGATAAAGCCTTTGATAGACAAAAAAGTGGCA 678 Query 658 AATGCTGAAACTAAGCATCAAAGTAAAGAAGAAGAAGCAAACCCTGAGTCGCCTTCACGC 717 ||||||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||| Sbjct 679 AATGCTGAAACAAAGCAACAAACTAAAGAAGAAGAAGCAAACCATGAGTCGCCTTCACGC 738 Query 718 CACTAATCTCTTCATATATC--ATCTAATTT 746 |||||||||||||||||||| ||||||||| Sbjct 739 CACTAATCTCTTCATATATCTCATCTAATTT 769 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36218819987 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5