BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931184 Length=549 Score E Sequences producing significant alignments: (Bits) Value AT4G25450.1 | Symbols: ATNAP8, NAP8 | non-intrinsic ABC protein... 233 1e-60 AT4G25440.1 | Symbols: ZFWD1 | zinc finger WD40 repeat protein ... 169 3e-41 AT2G35390.2 | Symbols: | Phosphoribosyltransferase family prot... 82.4 4e-15 > AT4G25450.1 | Symbols: ATNAP8, NAP8 | non-intrinsic ABC protein 8 | chr4:13009733-13013971 REVERSE LENGTH=2316 Length=2316 Score = 233 bits (126), Expect = 1e-60 Identities = 178/202 (88%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 79 TTTTTGGAACAATCTGCATTCTTTTTACTCTATC-CCGTCAACTTGCACCTGTGCTTGGT 137 ||||||||||||| || || || ||||||||||| || ||||||||||||||| |||||| Sbjct 766 TTTTTGGAACAATATGTATCCTATTTACTCTATCTCC-TCAACTTGCACCTGTACTTGGT 824 Query 138 CTATTGATGCTAGCTGTGTCAGTGT-TAGTTGGTTAACTCTATATG-GATCAACAGTTCC 195 ||||||||||||||||||||||| | ||||| | | | || | | |||| || ||||| Sbjct 825 CTATTGATGCTAGCTGTGTCAGT-TCTAGTT-GCT--GTGTACAAGAGATCGACTGTTCC 880 Query 196 TGTTTATAAAGCACATGGATTAGCTCAAGCAACAATGTCAGATTGTGTATCAGAAACGTT 255 |||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 881 TGTTTATAAATCGCATGGATTAGCTCAAGCAACAATGTCTGATTGTGTATCAGAAACGTT 940 Query 256 CTCTGCAATCCGAACTGGAAGA 277 ||||||||||||||||| |||| Sbjct 941 CTCTGCAATCCGAACTGTAAGA 962 > AT4G25440.1 | Symbols: ZFWD1 | zinc finger WD40 repeat protein 1 | chr4:13006727-13009608 REVERSE LENGTH=1799 Length=1799 Score = 169 bits (91), Expect = 3e-41 Identities = 195/240 (81%), Gaps = 27/240 (11%) Strand=Plus/Plus Query 308 GTGCTATCTCTCTGTGGCGTCCATGATGCAGAAGCCAAGCTAGTATTTCTATGTGCGTCC 367 |||||| ||||||||||||||||||||||||||||||||| |||||| |||||| ||| | Sbjct 1180 GTGCTAGCTCTCTGTGGCGTCCATGATGCAGAAGCCAAGCCAGTATTGCTATGTTCGTGC 1239 Query 368 AATGACAATTCATTGCACCTTTATGATTTGCCATCCTTAGATTCTGTTTTTTCTGTTCGG 427 ||||||||||| ||||||| | | | || || || | | | || | Sbjct 1240 AATGACAATTCGTTGCACC--TCT-A--TG--AT--TT-G---C--------C--ATC-G 1275 Query 428 TTTACAGAAAAGGGCAAAGTTTTAGC-AGAGCAAGAGATCCGATTGATCCAGATTGGTCC 486 ||||| |||| ||||||| ||||||| | |||||||||| || | |||||||| ||||| Sbjct 1276 TTTACGGAAAGGGGCAAAATTTTAGCTA-AGCAAGAGATTCGGTCAATCCAGATAGGTCC 1334 Query 487 CGGGGGCATATTTTTCACCGGTGATGGAAGTGGTCTCGGTTAAAGTATGGAAGTGGTCTA 546 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1335 CGGGGGCATATTTTTCACCGGTGATGGAAGTGGTCAAG-TTAAAGTATGGAAGTGGTCTA 1393 > AT2G35390.2 | Symbols: | Phosphoribosyltransferase family protein | chr2:14895279-14897822 REVERSE LENGTH=1702 Length=1702 Score = 82.4 bits (44), Expect = 4e-15 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Plus Query 34 AGAATCTCATGGAGCTTTTGATTATGGTAGATGCTTGCCGAAGA 77 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 AGAATCTCATGGAGCTTTTGATTATGGTAGATGCTTGCCGAAGA 745 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26322693028 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5