BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931278
Length=2146
Score E
Sequences producing significant alignments: (Bits) Value
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2... 3343 0.0
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4... 1020 0.0
> AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:6773117-6777985
FORWARD LENGTH=2728
Length=2728
Score = 3343 bits (1810), Expect = 0.0
Identities = 2014/2111 (95%), Gaps = 19/2111 (1%)
Strand=Plus/Plus
Query 1 CTTGTGTTCTAGTTAAAGGTATGAATCCAATGCAAGGGCCACG-AGCTACTGGTGCTTCG 59
|||||||||||||| |||||||||||||||||||||||||||| || || ||||| ||||
Sbjct 280 CTTGTGTTCTAGTTTAAGGTATGAATCCAATGCAAGGGCCACGCAG-TATTGGTGGTTCG 338
Query 60 TCTACTGACGTGAATCAGGCAGATGGTGAATCGATTTATTGCACAGAGACCG-CTATGAA 118
|||||||| |||||||| | ||||||||||||||||||||||||||||| || || ||||
Sbjct 339 TCTACTGAAGTGAATCAAGTAGATGGTGAATCGATTTATTGCACAGAGA-CGTCTTTGAA 397
Query 119 TGA-CATGTTGAATCCAGCAGACACTGGATTTCCAAACAATAGTACACCTTCAGGACGGC 177
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 398 T-ACCATGTTGAATCCAGCAGACACTGGATTTCCAAACAATAGTACACCTTCAGGACGAC 456
Query 178 CAACTTATGCAAGTTCGAGTTCTCATGCTGCTCAAGATCATAACTGGTGGAGGTTTGGGG 237
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 457 CAACTTATGCAAGTTCGAGTTCTCATGCTGCTCAAGATCATACCTGGTGGAGGTTTGGGG 516
Query 238 AATCCAGCTCCATATCTGGTCCTTCTGATCAGGTCAATTCCATTGGAATGAAGACAAGTC 297
|||||||||||||| | |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 517 AATCCAGCTCCATACCAGGTCCTTCTGATCAGGTCAATTCCATTGGAATAAAGACAAGTC 576
Query 298 ACCAGCTGCCTCAAGATGGTGCTCATCACTTTGTTGGCTATGGATCTGAGGGAAGGGAAT 357
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||
Sbjct 577 ACCAGCTGCCTCAAGATGGTACTCACCACTTTGTTGGCTATGGATCTGAGGGAAGGCAAA 636
Query 358 TAGGTCTGAATGGTATGATGGTAGATGGAGGGGTTCATGCTGGCAGTCACATCAGGAATG 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 637 CAGGTCTGAATGGTATGATGGTAGATGGAGGGGTTCATGCTGGCAGTCACATCAGGAATG 696
Query 418 GGCCTTCTTTCTTGCGCGGTTCAAGCTCTAATCCTATGCCACAGCATGTAGATATGAGCA 477
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 697 TGCCGTCTTTCTTGCGCGGTTCAAGTTCTAATCCTATGCCACAGCATGTAGATATGAGTA 756
Query 478 TGGACATGGACAGCGATAATTGTAGTGCACAGACTTCCGGGGTAGTTATCCGTCACAATA 537
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 757 TGGACATGGACAGCGATAATTGTAATGCACAGACTTCCGGGGTAGTTATCCGTCATAATA 816
Query 538 GCTATGGGAGTTCATTAGGAAGCTCAATTCAGGCCGCAGGGGAGAGCAGCAGTGGTCCTG 597
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 817 GCTATGGGAGTTCATTAGGAAGCTCAGTTCAGGCCGCTGGGGAGAGCAGCAGTGGTCCTG 876
Query 598 CTTCTCCGTTTGGTGGTTGGGGTTCGTCCTGCAAAAGAAAGACTCTCGAAGGATCCCCTG 657
||||||| |||||||||||||||||||| |||||||||||| |||| ||||||||||||
Sbjct 877 CTTCTCCATTTGGTGGTTGGGGTTCGTCTTGCAAAAGAAAGGCTCTTGAAGGATCCCCTA 936
Query 658 GCCATTATTTTTCTGGTGAAACTCCTAACCGCATTGTTCAGACTGAAAATAGTGCTTCGC 717
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 937 GTCATTATTTTTCTGGTGAAACTCCTAACCGCATTGTTCAGACTGAAAATAGTGCTTCGC 996
Query 718 ATGCAAGTCTTTCTCAATATGGTGCTTCAAGTAGCTTAAGTTTGGCTACACCCTCACAAA 777
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 997 ATGCAAGTCTTTCTCAATATGGTGCTTCAAGTAGCTTAAGTTTGGCTACACCTTCACAAA 1056
Query 778 GTTCTCCAAATGTTACTAATCATTTTGGCCGGACAGAACAAATGTTTGGATCTAGTGGTG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1057 GTTCTCCAAATGTTACTAATCATTTTGGCCGGACAGAACAAATGTTTGGATCTGGTGGTG 1116
Query 838 GAAGAGCAGTTGCAGCCAGTGCTTTTCATTCTGCAAGAAACACTGACACCTTATCTAGAG 897
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1117 GAAGAGCAGTTGCAGCCAGTGCTTTTCATTCTACAAGAAACACTGACACCTTATCTAGAG 1176
Query 898 CTGGCAGACGATTAAATCCCAGGCAGCCTCAGGAGTCTGTAGCATTCAGCGTATCACA-G 956
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1177 CTGGCAGACGATTAAATCCCAGGCAGCCTCAAGAGTCTGTAGCATTCAGCGTATCACATG 1236
Query 957 GCTGGAACTTCTGTGCATCCCACTGGTTCTTTGCAACAGAATTTACCATTGAACTCTCCC 1016
| ||| |||||||| | |||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1237 G-TGGGACTTCTGTACGTCCCACTGGTTCTTTGCAACAGAACTTACCATTAAACTCTCCT 1295
Query 1017 TTTGTAGATCCTCTAGATGTGAG------ATC-A--ACTAGTGGCTCAAGCACTGGTGAG 1067
||||||||||||| ||||||||| ||| | ||||||||||||| ||||||||||
Sbjct 1296 TTTGTAGATCCTCCAGATGTGAGATCATCATCAATTACTAGTGGCTCAAACACTGGTGAG 1355
Query 1068 AATCAGACAAATATAGTCCACCTCCCTGCTTTGACCAGGAATATACACCAATTTGCTTGG 1127
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 1356 AATCAGACAAATATAGTCCACCTCCCAGCTTTGACCAGGAATATACACCAATATGCTTGG 1415
Query 1128 GATGCTTCTTTCAGTTCCAGAGCCAGTAATTCGTCGGGTATTGGGATGCCTGCAGAGCGA 1187
||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||
Sbjct 1416 GATGCTTCTTTCAGTTCTAGAGCCAGTAATCCTTCGGGTATTGGGATGCCTGCAGAGCGA 1475
Query 1188 TTAGGACCACAGTGGGAAACACCGAGAAGCAACCCAGAGCAGCCCATGTTTGCACCTGCA 1247
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1476 TTAGGACCACAGTGGGAAACACCGAGAAGCAACCAAGAGCAGCCCTTGTTTGCACCTGCA 1535
Query 1248 ACTGACATGAGACAGCCGGTGCATGATCTTTGGAATTTCTCACATGGAAACCCTGGTTCA 1307
||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||
Sbjct 1536 ACTGACATGAGACAGCCGGTGCATGATCTTTGGAATTTCGCACGTGGAAGCCCTGGTTCA 1595
Query 1308 TCTATAGATTCTCCCTTTGTTCCTCGAGCAGGGCCGAGTTCAGCTATTCATGCGCCACAG 1367
||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1596 TCTGTAGATTCTCTCTTTGTTCCTCGAGCAGGGCCGAGTTCAGCTATTCATACGCCACAG 1655
Query 1368 CCTAATCCCACATGGATTCCTCCCCAGAGTGCCCCAATACATAATCCATCGAGAACATCA 1427
||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||
Sbjct 1656 CCTAATCCCACATGGATTCCTCCTCAGAATGCCCCACCACATAATCCATCGAGAACATCA 1715
Query 1428 GAACTTTCTCCTTGGTCTTTATTTCCTAGTATTGAATCTCAATCTGCTAGTCACGGT-GC 1486
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||
Sbjct 1716 GAACTTTCTCCTTGGTCTTTATTTCCTAGTATTGAATCTCCATCTGCTAGTCATGGTGGC 1775
Query 1487 CTCTCTTCCATTATTACCCGCAGGCCCTTCTGTTTCCTCAAATGAGGTGGCAATGCCATC 1546
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1776 C-CTCTTCCATTATTACCCGCAGGCCCTTCTGTTTCCTCAAATGAGGTGACAATGCCATC 1834
Query 1547 TGGTTCTAATAGCCGGAGCCATCGCTCACGGCAAAGAAGATCAGGGTTGTTATTGGAGAG 1606
| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1835 TAGTTCTAATAGCCGAAGCCATCGCTCACGGCATAGAAGATCAGGTTTGTTATTGGAGAG 1894
Query 1607 ACAAAATGAACTTCTCCACTTGCGTCACATAGGGAGGAGCTTAGCTGCTGACGGTAATGG 1666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1895 ACAAAATGAACTTCTCCACTTGCGTCACATAGGGAGGAGCTTAGCTGCTGACGGTAATGG 1954
Query 1667 AAGGAATCAAATCATCTCCGAGATACGTCAGGTGTTGCATGCCATGAGAAGAGGAGAAAA 1726
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1955 AAGGAATCAAATCATTTCTGAGATACGTCAGGTGTTGCATGCCATGAGAAGAGGAGAAAA 2014
Query 1727 TTTACGGGTTGAGGATTACATGGTGTTCGATCCACTTATCTACCAGGGTATGACTGACAT 1786
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2015 TCTACGGGTTGAGGATTACATGGTGTTCGATCCACTTATCTACCAGGGTATGACTGACAT 2074
Query 1787 GCATGATAGGCATCGGGAAATGCGGCTTGATGTTGACAACATGTCGTATGAGGAGCTATT 1846
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2075 GCATGATAGGCATCGGGAAATGCGGCTTGATGTGGACAACATGTCGTATGAGGAGCTATT 2134
Query 1847 GGCACTTGGGGAACGCATAGGTGATGTGAGCACTGGCCTAAGTGAAGAGGTCATTTTGAA 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2135 GGCACTTGGGGAACGCATAGGTGATGTGAGCACTGGCCTAAGTGAAGAGGTCATTTTGAA 2194
Query 1907 AGCATTGAAACAGCACAAACATACATTTTCTTCTGCTTCTTCTGCTGAGTTGCATCAGAA 1966
|||| ||||||| ||||||||||||| ||| ||| ||||||||| |||||||||||||||
Sbjct 2195 AGCAATGAAACAACACAAACATACATCTTCGTCTCCTTCTTCTGTTGAGTTGCATCAGAA 2254
Query 1967 CATAGAGCCATGCTGCATTTGTCAGGAAGAGTATGTAGAAGGTGATAATCTTGGAACCTT 2026
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2255 CATAGAGCCATGCTGCATTTGTCAGGAAGAGTATGTAGAAGGTGATAATCTAGGAACCTT 2314
Query 2027 GAAATGTGGACATGAATTCCACAAGGACTGTATCAAGCAATGGGTCATGATCAAGAATCT 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2315 GAAATGTGGACATGAATTCCACAAGGACTGTATCAAGCAATGGGTCATGATCAAGAATCT 2374
Query 2087 CTGCCCCATTT 2097
|||||||||||
Sbjct 2375 CTGCCCCATTT 2385
> AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:16304280-16308679
REVERSE LENGTH=2837
Length=2837
Score = 1020 bits (552), Expect = 0.0
Identities = 1358/1731 (78%), Gaps = 120/1731 (7%)
Strand=Plus/Plus
Query 424 CTTTCTTGCGCGGTTCAAGCTCTAATCCTATGCCACAG-CATGTAGATATGAGCATGGAC 482
|||| ||||| || |||||||||| || |||| | || |||||| || || ||| ||||
Sbjct 820 CTTT-TTGCGTGGGTCAAGCTCTAGTCATATGTTA-AGTCATGTAAATCTGGGCAAGGAC 877
Query 483 ATGGACAGCGATAATTGTAGTGCACAGACTTCCGGGGTAGTTATCCGTCACAATAGCTAT 542
||||||| | || | || || |||||||| ||||| |||||||| || |||| ||
Sbjct 878 ATGGACATTGGTAGTGGT-CTG--CAGACTTCTGGGGTCGTTATCCGCCATAATAACTGC 934
Query 543 GGGAGTTCATTAGGAAGCTCAATTCAGGCCGCAGGGGAGAGCAGCAGTGGTCCTGCTTCT 602
| || |||||| |||||||||| ||| |||||| |||||| ||||||||||| | ||||
Sbjct 935 GAGACTTCATTGGGAAGCTCAAGTCAAACCGCAGAGGAGAGAAGCAGTGGTCCAGGTTCT 994
Query 603 CCGTTTGGTGGT-TGGGGTTCGTCCTGCAAAAGAAAGACTCTCGAAGGATCCCCTGGCCA 661
|||| |||||| | ||||| ||||||||||||||| |||| |||||| | ||| ||||
Sbjct 995 TCGTTGGGTGGTCT-AGGTTCATCCTGCAAAAGAAAGGCTCTTGAAGGAGCTCCTAGCCA 1053
Query 662 TTATTTTTCTGGTGAAACTCCTAACCGCATTGTTCAGACTGAAAATAGTGCTTCGCATGC 721
|| ||| ||||||||| || | || || |||| ||||| ||| |||||| | |||
Sbjct 1054 TTCTTTCCCTGGTGAAAGTCATGGTTGCTTTTTTCAAACTGAGAATGGTGCTTGGAATG- 1112
Query 722 A-AGTCTTTCTCAATATGGTGCTTCAAGTAGCTTAAGTTTGGCTACACCCTCACAAAGTT 780
| ||||| ||||||||| |||||||||||||||||||||| ||| |||||||||| ||
Sbjct 1113 AGGGTCTTGCTCAATATGATGCTTCAAGTAGCTTAAGTTTGTCTATGCCCTCACAAAATT 1172
Query 781 CTCCAAATGTTACTAATCATTTTGGCCGGA-CAGAACAAATG-TTTGGATCT-AGTGGTG 837
|||||||||||| |||||| | ||| | | |||||| || | ||||||| | ||||||
Sbjct 1173 CTCCAAATGTTAATAATCAGTCTGGTC-TACCAGAACCAA-GATTTGGAT-TGGGTGGTG 1229
Query 838 GAAGAGCAGTTGCAGCCAGTGCTTTTCATTCTGCAAGAAACACTGACACCTTATCTAGAG 897
| ||||||||| |||| |||||||||| |||| |||||| ||| || ||| | ||||||
Sbjct 1230 GGAGAGCAGTTACAGCAAGTGCTTTTCCTTCTACAAGAAGCACGGAAACCATCTCTAGAC 1289
Query 898 CTGGCAGACGATTAAATCCCAGGCAGCC-TCAGGAGTCTGTAGCATTCAGCGT-ATCACA 955
||||||| || |||||||| ||||||| || ||||| || ||||||||| | | ||||
Sbjct 1290 CTGGCAGGCGGTTAAATCCTGGGCAGCCACCA-GAGTCAGTTGCATTCAGCTTCA-CACA 1347
Query 956 GGCTGGAACTTCTGTGCATCCCACTGGTTCTTTGCAACAGAATTTACCATTG-AAC-TCT 1013
| | || | ||||||| | | || ||||||| | |||||| | ||| |||
Sbjct 1348 GTCCGGTAGTTCTGTG-------C--G-TC--AGCAACAGCAGTTACCA--GCAACTTCT 1393
Query 1014 CCCTTTGTAGATCCTCTAGATG--TGAG--AT--CA---ACTA-GTGGCTCAAGCACTGG 1063
|| ||||| || ||||| |||| ||| || || || | || ||||||||| |||
Sbjct 1394 CCTTTTGTTGACCCTCTGGATGCAAGAGCAATACCAGTTAC-AGGTAGCTCAAGCAGTGG 1452
Query 1064 TGA-GAATCAGACAAATATAG-TCCACCTCCCTGCTTTGACCAGGAATATACACCAATTT 1121
||| | |||| ||| ||| | ||||||| ||||| ||||| || |||||||||||||||
Sbjct 1453 TGATG-GTCAGCCAAGTAT-GATCCACCTTCCTGCATTGACAAGAAATATACACCAATTT 1510
Query 1122 GCTTGGGA-TGCTTCTTTC-AGTTCCAGAGCCAGTAATTCGTCGGGTATTGGGATGCCTG 1179
|||| ||| |||||| || ||||| |||| || || | | | |||||||
Sbjct 1511 GCTT-GGAGTGCTTC-GTCTAGTTCGAGAG-CA--AA-----C----A---GTATGCCTG 1553
Query 1180 CAGAGCGATTAGGACCA-CAGTGGGAAACACCGAGAAGCAACCCAGAGCAGCCCA-T-GT 1236
|||| |||| | || || ||||| | || |||| ||| |||||||| ||| | |
Sbjct 1554 AAGAGGGATT--G-TCACCA-TGGGACGCGCCAAGAATAAACTCAGAGCAG-CCAGTCTT 1608
Query 1237 T--TGCACCTGCAACTGACATGAGACAGCCGGTGCATGATC-----T-TTGGAATTTCTC 1288
| | ||||||||| ||| | |||| | || ||||| |||| | ||||| |||| |
Sbjct 1609 TACTACACCTGCAAATGAAACGAGAAATCCAGTGCAGGATCAGTTTTGTTGGAGTTTCAC 1668
Query 1289 ACATGGAAACCCTGGTTCATCTATAGATTCTCCCTTTGTTCCTCGAGCAGGGCCGAGTTC 1348
| |||||||||| || ||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1669 TCGTGGAAACCCTAGTACATCTGGAGATTCTCCCTTTGTTCCTCGAGCAGGATCGAGTTC 1728
Query 1349 AGCTATTCATGCG-CCACAGCCTAATCCCACATGGATTCCTCCCCAGAGTGCCCCAATAC 1407
|| || |||| | ||||| |||||||| ||| || |||||| | | ||| |
Sbjct 1729 AGGGATCCATG-GTTTGCAGCCGAATCCCACTTGGGTTACTCCCC--A-T-----AAT-C 1778
Query 1408 ATAATCCATCGAGAACATCAGAACTTTCTCCTTGGTCTTTATTTCCTAGTATTGAATCTC 1467
||| || |||| ||||||| || |||| |||||||||||||||||||| ||||||
Sbjct 1779 --AAT-CA---AGAATATCAGAAGTTGCTCCGTGGTCTTTATTTCCTAGTATCGAATCTG 1832
Query 1468 AATCTGCTAGTCACGGTGCCTCTCTTCCATTATTACCCGCAGGCCCTTCTGTTTCCTCAA 1527
||||||||| ||| ||||| |||||||||||| ||||| |||| |||||||||||||| |
Sbjct 1833 AATCTGCTACTCATGGTGCTTCTCTTCCATTACTACCCACAGGGCCTTCTGTTTCCTCGA 1892
Query 1528 ATG-AGGTGGCAATGCCATCTGGTTCTAATAGCCGGAGCCATCGCTCACGGCAAAGAAGA 1586
||| || | ||| ||| ||||| |||| ||| || || |||||||| || |||||||||
Sbjct 1893 ATGAAGCT-GCAGCGCCGTCTGGATCTAGTAGTCGTAGTCATCGCTCTCGACAAAGAAGA 1951
Query 1587 TCAGGG-TTGTTATTGGAGAGACAAAATGAACTTCTCCACTTGCGTCACATAGGGAGGAG 1645
|| ||| || ||| |||| || |||||||| | |||||| ||||||||| |||| || ||
Sbjct 1952 TC-GGGATTATTACTGGAAAGGCAAAATGATCATCTCCATTTGCGTCACTTAGGAAGAAG 2010
Query 1646 CTTAGCTGCTGACGGTAATGGAAGGAATCAAATCATCTCCGAGATACGTCAGGTGTTGCA 1705
|||||||||||| | |||||||||| | | || ||||||||||| ||||||||| |
Sbjct 2011 CTTAGCTGCTGATAATGATGGAAGGAACCGGCTGATTTCCGAGATACGGCAGGTGTTG-A 2069
Query 1706 -TGCCATGAGAAGAGGAGAAAATTTACGGGTTGAGGATTACATGGTGTTCGATCCACTTA 1764
||||||| ||||||| || ||||||||| |||||||||| ||||| ||||||||||| |
Sbjct 2070 GTGCCATGCGAAGAGGGGAGAATTTACGGTTTGAGGATTATATGGTATTCGATCCACTGA 2129
Query 1765 TCTACCAGGGTATGACTGACATGCATGATAGGCATCGGGAAATGCGGCTTGATGTTGACA 1824
||||||| |||||| | || |||||||||||||||||||| ||||| ||||||||||| |
Sbjct 2130 TCTACCAAGGTATGGCCGAGATGCATGATAGGCATCGGGATATGCGTCTTGATGTTGATA 2189
Query 1825 ACATGTCGTATGAGGAGCTATTGGCACTTGGGGAACGCATAGGTGATGTGAGCACTGGCC 1884
||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 2190 ACATGTCATATGAGGAGCTATTGGCACTTGGGGAACGCATAGGAGATGTGAGCACTGGTC 2249
Query 1885 TAAGTGAAGAGGTCATTTTGAAAGCATTGAAACAGCACAAACATACATTTTCTTCTGCTT 1944
|||| |||||||| || |||||| | ||||||||||||||||||||| || | |||
Sbjct 2250 TAAGCGAAGAGGTGATCCTGAAAGTAATGAAACAGCACAAACATACATCATC--C-GCTG 2306
Query 1945 CTTCTGCTGAGTTGCATCAGAACATAGAGCCATGCTGCATTTGTCAGGAAGAGTATGTAG 2004
|| ||| | || ||| |||| ||||| ||||| | |||||||||||||||| ||
Sbjct 2307 CTG--GCTC--T--CACCAGGACATGGAGCCTTGCTGTGTCTGTCAGGAAGAGTATGCAG 2360
Query 2005 AAGGTGATAATCTTGGAAC-CTTGAAATGTGGACATGAATTCCACAAGGACTGTATCAAG 2063
|||| ||| |||||||||| || | | ||||| |||||||| |||| | ||| |||||
Sbjct 2361 AAGGAGATGATCTTGGAACACTGGGA-TGTGGTCATGAATTTCACACTGCCTGCGTCAAG 2419
Query 2064 CAATGGGTCATGATCAAGAATCTCTGCCCCATTTGTAAGACCGAGGCATTA 2114
|||||| | ||| |||||||||||||||| ||||||||||| | ||| |||
Sbjct 2420 CAATGGCTGATGCTCAAGAATCTCTGCCCAATTTGTAAGACTGTGGCTTTA 2470
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106425155400
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5