BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931305
Length=1104
Score E
Sequences producing significant alignments: (Bits) Value
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 1048 0.0
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 941 0.0
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 939 0.0
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 556 1e-157
AT1G30935.1 | Symbols: | pseudogene, F-box protein family, con... 65.8 9e-10
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-... 65.8 9e-10
AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 58.4 1e-07
AT1G46840.1 | Symbols: | F-box family protein | chr1:17270185-... 56.5 5e-07
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 1048 bits (567), Expect = 0.0
Identities = 795/898 (89%), Gaps = 44/898 (5%)
Strand=Plus/Plus
Query 215 GAGGCTAGACCTGTGATATGTAACCCCATC-ACAGGACGGTATGCGATCTTACCTAATCG 273
||||||| |||| | ||||||||||||| | |||||||||||||| ||||||||||||||
Sbjct 533 GAGGCTACACCTCTAATATGTAACCCCA-CTACAGGACGGTATGCCATCTTACCTAATCG 591
Query 274 GTATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGAATGACAAGCAATACAA 333
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 592 GTATACTTACAGAAAGGCGTATAGCTTTTTCGGATTTGACCCGATTGACAAGCAATACAA 651
Query 334 GGTATTGTCCATGGTTTATCCATCTGGTCCTGGTGATAGTAAAATTCTTACATTTGGAGA 393
|| ||||||||| |||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 652 GGCATTGTCCATATTTTATCCATCTGGTCCTGGTCATAGTAAAATTCTTACATTTGGGGC 711
Query 394 TGGAGATCTGACGTGGAGAAAGATAAAATGTCCCTTACGATATGATCGACATGATATTAA 453
|||| || ||| ||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 712 TGGACATATGAAGTGGAGAAAGATAAATTGTCCCTTACGATATGATAGACATGATATTAA 771
Query 454 GAGTGAAGGGATATGCATCAATGGAGTTTTGTATTACTTAGGCAGC-C--C-------G- 502
|||||||||||||||||||||||||||||||||||||||||| ||| | | |
Sbjct 772 GAGTGAAGGGATATGCATCAATGGAGTTTTGTATTACTTAGGTAGCACGTCGGATTGTGT 831
Query 503 --A--AT-G--AT-G-A-AATATCTGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGA 552
| || | || | | | ||||||||||||||||||||||||||||| ||||||||||
Sbjct 832 TAAGGATGGTCATGGCATAGTATCTGATTATGTGATAGTTTGCTTTGATATTAGGTCTGA 891
Query 553 GAAATTCACCTTTATTGACGTAGAAAGGTTTTGTCGATTGATAAACTATAAGGGAAAATT 612
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 892 GAAATTCACGTTTATTGACGTAGAAAGGTTTTGTCGATTGATCAACTATAAGGGAAAATT 951
Query 613 AGCTGTGATTTATTGGGAGGATGATGTCGACATTCATGAGCTTTATTA-TCAGGAGGGTA 671
|||||||||||||||||||||||||||||||||| || |||||||||| || |
Sbjct 952 AGCTGTGATTTATTGGGAGGATGATGTCGACATTTATAAGCTTTATTATTC------G-- 1003
Query 672 TAGATGTCGACAAATATGTGGAGGAGAAT-CTAGAAGCTGATGCCATTAATGAGTTGCGT 730
||||||||| ||||||||||| | ||| || | | ||||| ||||||||||||||||
Sbjct 1004 --GATGTCGACGAATATGTGGAGTATAATATTA-ACGATGATGACATTAATGAGTTGCGT 1060
Query 731 TTGTGGATTCTGGAGGATGTTGAGAAACAAG-AATGGTCGAAATATGCCTATACTTGGAC 789
||||| |||| ||||||||| |||||| || ||||||||||||||||||| ||||||||
Sbjct 1061 GTGTGGGTTCTAGAGGATGTTAAGAAAC-AGCAATGGTCGAAATATGCCTACACTTGGAC 1119
Query 790 CGATGATAAATTCTTCCGTCGTC-TCGTTTCCATTGGTGGAGTGACTGCCTCAGGTGAGA 848
|||||||| |||||||||||||| | |||||||| | ||||| |||||| || ||||| |
Sbjct 1120 CGATGATAGATTCTTCCGTCGTCGT-GTTTCCATCGCTGGAGGGACTGCTTCGGGTGAAA 1178
Query 849 TAGTGTTTTCGATGCGCAAGTATACAACAAAACAACCGTTTTATGTTTTTTACTTCAATC 908
||||||||||||||| ||| |||||| | || ||||||||||||||||| ||||||||||
Sbjct 1179 TAGTGTTTTCGATGCTCAAATATACACCTAAGCAACCGTTTTATGTTTTCTACTTCAATC 1238
Query 909 TTGAAAGGAACACTCTCCAACGTGTTGAAATCAAAGGTTTTGGTGAAGCGTTTAAGGAAA 968
|||||||||||||||||||||||||||||| ||||||||||||||| ||| ||| |||
Sbjct 1239 CCGAAAGGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGTGTTAAAG-AAA 1297
Query 969 A-TTGTAGAGTTTGCACCTTTGTAAACCACGCAGAGGATCTTAATGTTAACGA-TTTAAA 1026
| ||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||
Sbjct 1298 ACTTGTAGAGTTTGCACCTTTGTAAACCACGTAGAGGATCTTAATGTTCACGACTTTAAA 1357
Query 1027 ACAACTCAAGTCAGTCCATCCTCCATTGGTGGATGAATCAGATTCAGAATCAGACTAG 1084
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1358 -CAACTCAAGTCAGTCCATCCCCCATTGGTGGATGAGCCAGATTCAGAATCAGACTAG 1414
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 941 bits (509), Expect = 0.0
Identities = 741/851 (87%), Gaps = 23/851 (3%)
Strand=Plus/Plus
Query 217 GGCTAGACCTGTGATATGTAACCCCATCACAGGACGGTATGCGATCTTACCTAATCGGTA 276
|||||||||| | ||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 360 GGCTAGACCTCTAATATGTAACCCCAACACAGGACGGTATGTGATCTTACCTAATCGGTA 419
Query 277 TACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGAATGACAAGCAATACAAGGT 336
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 420 TACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGATTGGCAAGCAATACAAGGC 479
Query 337 ATTGTCCATGGTTTATCCATCTGGTCCTGGT-GAT-AGTAAAATTCTTACATTTGGAGAT 394
||||||||| | ||||||||||| ||||||| | | | |||||| |||||||| ||||||
Sbjct 480 ATTGTCCATTGCTTATCCATCTGATCCTGGTCG-TCA-TAAAATACTTACATTAGGAGAT 537
Query 395 GGAGATCTGACGTGGAGAAAGATAAAATGTCCCTTACGATATGATCGACATGATATTAAG 454
||||||||||| ||||||||||| ||||||||| ||| | || | | || |||||||
Sbjct 538 GGAGATCTGACATGGAGAAAGATCAAATGTCCCGTACCAC--GA-C--C-TGGTATTAAG 591
Query 455 AGTGAAGGGATATGCATCAATGGAGTTTTGTATTACTTAGGCAGCCCGAA-TGATGAAAT 513
|||| ||||||||||||||||| |||||||||| ||||| | | ||| ||| | |
Sbjct 592 GGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTAG-CTGAGAGAAATGA-GCTAG 649
Query 514 A-TCTGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACCTTTATTGACG 572
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 650 AGTCTGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATATTGACG 709
Query 573 TAGAAAGGTTTTGTCGATTGATAAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGG 632
|||| ||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||||
Sbjct 710 TAGAGAGGATTTGTCGATTGATAAACTACAAGGGCAAATTAGCTATGATTTATTGGGAGG 769
Query 633 ATGATGTCGACATTCATGAGCTTTATTATCA-GGA-GGGTATAGA-TGTCGACAAATATG 689
|||||||||||||| ||||| || || || | || ||| | ||| | | || || |||
Sbjct 770 ATGATGTCGACATTTATGAGATTAATCAT-ATGGCTGGG-A-AGAATCTTGATAAGTATT 826
Query 690 TGGAGGAGAATCTAGAAGCTGATGCCATTAATGAGTTGCGTTTGTGGATTCTGGAGGATG 749
||||||| ||||| || | |||||||| ||||||||||| | ||||| |||| |||||||
Sbjct 827 TGGAGGAAAATCTCGATGTTGATGCCACTAATGAGTTGCATGTGTGGGTTCTAGAGGATG 886
Query 750 TTGAGAAACAAGAATGGTCGAAATATGCCTATACTTGGACCGATGATAAATTCTTCCGTC 809
|||||||||| |||||||| ||||||||||| |||||||||||||||| |||||||||||
Sbjct 887 TTGAGAAACAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTC 946
Query 810 GTCTCGTTTCCATTGGTGGAGTGACTGCCTCAGGTGAGATAGTGTTTTCGATGCGCAAGT 869
||| | ||||||||| ||||| |||| || ||||| |||||||||||||| |||||||
Sbjct 947 GTCACCTTTCCATTGCTGGAGCCACTGTTTCGGGTGAAATAGTGTTTTCGATACGCAAGT 1006
Query 870 ATACAACAAAACAACCGTTTTATGTTTTTTACTTCAATCTTGAAAGGAACACTCTCCAAC 929
| ||| | |||||||||||||||||||| |||||||||| ||| ||||||||||||||
Sbjct 1007 ACACATCTAAACAACCGTTTTATGTTTTCTACTTCAATCCCGAATCGAACACTCTCCAAC 1066
Query 930 GTGTTGAAATCAAAGGTTTTGGTGAAGCGTTTAAGG-A-AAA-TTGTAGAGTTTGCACCT 986
|||| |||| | |||||||||||||||| ||||||| | ||| |||||| ||| ||||||
Sbjct 1067 GTGTAGAAACCCAAGGTTTTGGTGAAGCATTTAAGGCAGAAACTTGTAGCGTTCGCACCT 1126
Query 987 TTGTAAACCACGCAGAGGATCTTAATGTTAACGATTTAAAACAACTCAAGTCAGTCCATC 1046
|||||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||||
Sbjct 1127 TTGTAAACCACGTAGAGAATCTTGATGTTAACGATTTAAAACAACTCAAGTCAGGCCATC 1186
Query 1047 CTCCATTGGTG 1057
|||||||||||
Sbjct 1187 CTCCATTGGTG 1197
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 939 bits (508), Expect = 0.0
Identities = 761/874 (87%), Gaps = 53/874 (6%)
Strand=Plus/Plus
Query 217 GGCTAGACCTGTGATATGTAACCCCATC-ACAGGACGGTATGCGATCTTACCTAATCGGT 275
|||||||||| | ||||||||||||| | |||||||||||||| ||||||||||||||||
Sbjct 402 GGCTAGACCTCTAATATGTAACCCCA-CTACAGGACGGTATGCCATCTTACCTAATCGGT 460
Query 276 ATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGAA-TGACAAGCAATACAAG 334
|||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||
Sbjct 461 ATACTTACAGAAAGGCGTTTAGCTTTTTCGGGTTTGACCC-AATTGACAAGCAATACAAG 519
Query 335 GTATTGTCCATGGTTTATCCATCTGGTCCTGGTGATAGTAAAATTCTTACATTTGGAGAT 394
| ||||||||||||||||||||||||||||||| |||||| | || |||||||||||| |
Sbjct 520 GCATTGTCCATGGTTTATCCATCTGGTCCTGGTCATAGTAGAGTTATTACATTTGGAGCT 579
Query 395 GGAGATCTGACGTGGAGAAAGATAAAATGTCCCTTACGATATGATCGACATGATATTAAG 454
|||||||||| |||||||| ||||||||| || | || || |||||||||||||||
Sbjct 580 GGAGATCTGAAGTGGAGAAGGATAAAATG----TT-C-AT-TG--CGACATGATATTAAG 630
Query 455 AGTGAAGGGATATGCATCAATGGAGTTTTGTATTACTTA-G-G-CA-GCCCGA----A-T 505
||||||||| |||| |||||||| ||||||||||||||| | | || | | || | |
Sbjct 631 AGTGAAGGGGTATGTATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGGAGT 690
Query 506 ---G---AT-G-AA--A--T-A--TCTGATTATGTGATAGTTTGCTTTGATGTTAGGTCT 550
| || | || | | | |||| |||| ||||||||||||||||||||||||||
Sbjct 691 CGCGTTAATGGTAATCACGTAACGTCTGGTTATATGATAGTTTGCTTTGATGTTAGGTCT 750
Query 551 GAGAAATTCACCTTTATTGACGTAGAAAGGTTTTGTCGATTGATAAACTATAAGGGAAAA 610
|| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||
Sbjct 751 GAAAAATTCACCTTTATTGACGTAAAAAGGTTTTGTCGATTGATAAACTACAAGGGCAAA 810
Query 611 TTAGCTGTGATTTATTGGGAGGATGATGTCGACATTCATGAGCTTTATTATCAGGA-GGG 669
|||||||||||||||||||||||||||||||||||||| ||||||||||| || | |||
Sbjct 811 TTAGCTGTGATTTATTGGGAGGATGATGTCGACATTCAAGAGCTTTATTA-CAAAAAGGG 869
Query 670 TATAGATGTCGACAAATATGTGGAGGAGAATCTAGAA-GCTGATGCCATTAATGAGTTGC 728
|||||||||||| ||||||||||| | ||| | || |||||||||| ||||||||||
Sbjct 870 TATAGATGTCGAGGAATATGTGGAGAATAATGTC-AACGCTGATGCCACTAATGAGTTGT 928
Query 729 GTTTGTGGATTCTGGAGGATGTTGAGAAACAAGAATGGTCGAAATATGCCTATACTTGGA 788
|| |||||||||| | ||||||||||||||| |||||||||||| ||||||| |||||||
Sbjct 929 GTGTGTGGATTCTAGCGGATGTTGAGAAACAGGAATGGTCGAAACATGCCTACACTTGGA 988
Query 789 CCGATGATAAA-TTCTTCCGTCGTCTCGTTTCCATTGGTGGAGTGACTGCCTCAGGTGAG 847
||||||| ||| |||||||||||| | || ||||| | |||||||||||| || |||||
Sbjct 989 CCGATGA-AAAGTTCTTCCGTCGTTTGGTATCCATCGCTGGAGTGACTGCTTCGGGTGAA 1047
Query 848 ATAGTGTTTTCGATGCGCAAGTATACAACA-AAACAACCGTTTTATGTTTTTTACTTCAA 906
|||||||||||||||||||||| || | | ||||||||||||||||| |||||||||||
Sbjct 1048 ATAGTGTTTTCGATGCGCAAGTGTA-ATCCTAAACAACCGTTTTATGTGTTTTACTTCAA 1106
Query 907 TCTTGAAAGGAACACTCTCCAACGTGTTGAAAT-CAAAGGTTTTGGTGAAGC-GTTTAAG 964
|| |||||||||| |||||||||||||||||| ||| |||||||||||||| ||| | |
Sbjct 1107 TCCCGAAAGGAACAGTCTCCAACGTGTTGAAATTCAA-GGTTTTGGTGAAGCCGTT-ACG 1164
Query 965 GAAAA-TTGTAGA-GTTTGCACCTTTGTAAACCACGCAGAGGATCTTAATGTTAACGATT 1022
||| |||| || |||||||||||||||||||||| ||||||||| |||||| ||||||
Sbjct 1165 -AAATCTTGT-GACGTTTGCACCTTTGTAAACCACGTAGAGGATCTCAATGTTTACGATT 1222
Query 1023 TAAAACAACTCAAGTCAGTCCATCCTCCATTGGT 1056
||||||||||||||||||||||||||||||||||
Sbjct 1223 TAAAACAACTCAAGTCAGTCCATCCTCCATTGGT 1256
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 556 bits (301), Expect = 1e-157
Identities = 449/521 (86%), Gaps = 7/521 (1%)
Strand=Plus/Plus
Query 517 TGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACCTTTATTGACGTAGA 576
||| ||||||||||||||||||||||| | ||||||||||||||||||| ||| |||| |
Sbjct 1059 TGAGTATGTGATAGTTTGCTTTGATGTGACGTCTGAGAAATTCACCTTTGTTGGCGTACA 1118
Query 577 AAGGTTTTGTCGATTGATAAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGA 636
|| |||||||| |||||| ||||| ||||| || |||| |||||| ||||||||||||||
Sbjct 1119 AAAGTTTTGTCTATTGATCAACTACAAGGGCAAGTTAGATGTGATCTATTGGGAGGATGA 1178
Query 637 TGTCGACATTCATGAGCTTTATTATCAGGAGGGTATAG-ATGTCGACAAATATGTGGAGG 695
|||||||||||||||| ||| ||| | | | | || || |||| | ||| |||| |
Sbjct 1179 TGTCGACATTCATGAGATTTGTTA-CTTT-GCG-A-AGGATCTCGATGAGTATTTGGACG 1234
Query 696 AGAATCTAGAAGCTGATGCCATTAATGAGTTGCGTTTGTGGATTCTGGAGGATGTTGAGA 755
| ||||| || |||||||||| ||| ||||||| | ||||| |||| || ||||||||||
Sbjct 1235 AAAATCTTGACGCTGATGCCACTAACGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAGA 1294
Query 756 AACAAGAATGGTCGAAATATGCCTATACTTGGACCGATGATAAATTCTTCCGTCGTCTCG 815
|||| |||||||| ||||||||||| |||||||||||||||| |||||||| ||||| |
Sbjct 1295 AACAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCATCGTCACC 1354
Query 816 TTTCCATTGGTGGAGTGACTGCCTCAGGTGAGATAGTGTTTTCGATGCGCAAGTATACAA 875
||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||| |||
Sbjct 1355 TTTCCATTGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTACACAT 1414
Query 876 CAAAACAACCGTTTTATGTTTTTTACTTCAATCTTGAAAGGAACACTCTCCAACGTGTTG 935
| |||||||| ||||||||||| |||||||||| |||||||| ||||||||||||||||
Sbjct 1415 CTAAACAACCATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTTG 1474
Query 936 AAATCAAAGGTTTTGGTGAAGCGTTTAAGGAAAA-TTGTAGAGTTTGCACCTTTGTAAAC 994
||||| ||||||||||||||||||||| ||| || |||||| ||| ||||||||||||||
Sbjct 1475 AAATCCAAGGTTTTGGTGAAGCGTTTA-GGACAACTTGTAGTGTTCGCACCTTTGTAAAC 1533
Query 995 CACGCAGAGGATCTTAATGTTAACGATTTAAAACAACTCAA 1035
||| |||||||||| |||||||||||||| ||||||||||
Sbjct 1534 CACATAGAGGATCTTGATGTTAACGATTTAGAACAACTCAA 1574
> AT1G30935.1 | Symbols: | pseudogene, F-box protein family, contains
F-box domain Pfam:PF00646 | chr1:11017436-11018990 REVERSE
LENGTH=1555
Length=1555
Score = 65.8 bits (35), Expect = 9e-10
Identities = 91/116 (78%), Gaps = 11/116 (9%)
Strand=Plus/Plus
Query 527 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACCTTT-ATTGACGTAGAA-A--GGTT 582
|||| ||||||||||||||||||||||||||||| ||| || | | | || | |||
Sbjct 679 ATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCAA-TTTCATAGCCACAAAACATCGGTA 737
Query 583 TTG-TC-GATTGATAAACTATAAGGGAAAATTA-GCTGTGATTTATTGGGAGGATG 635
| || | ||||||||||||||||| |||||| | || |||| ||| |||| |||
Sbjct 738 C-GATCAG-TTGATAAACTATAAGGGGAAATTATG-TGGGATTAATTTGGAGTATG 790
> AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-11005444
REVERSE LENGTH=1203
Length=1203
Score = 65.8 bits (35), Expect = 9e-10
Identities = 136/183 (74%), Gaps = 14/183 (8%)
Strand=Plus/Plus
Query 377 ATTCTTACATTTGGAGATG-GAGA-TCTGACGTGGAGAAAGATAAAATGTCCCTTACGAT 434
||||||||||| |||| || | | | || |||||| ||||| ||| ||||||||| |
Sbjct 559 ATTCTTACATTAGGAGCTGAAACAGT-TG-GGTGGAGGAAGATCCAATCTCCCTTACGCT 616
Query 435 ATGATCGACATGATATTAAGAGTGAAGGGATATGCATCAAT-GGAGTTTTGTATTACTTA 493
|| || | | ||| ||| | ||| || ||||||||| ||| ||||||||||| ||
Sbjct 617 ATCTTC--C-TCATAGTAA-TG-GAA-CAATTTGCATCAATGGGA-TTTTGTATTACCTA 669
Query 494 GGC-AGCCCGAATGATGAAATATCTGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGA 552
|| | ||| ||| ||| | | ||||| |||||||||||||||||||||||||
Sbjct 670 -GCTAAAATTAATTATGCAATGGATAAAAATGTGCTAGTTTGCTTTGATGTTAGGTCTGA 728
Query 553 GAA 555
|||
Sbjct 729 GAA 731
> AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899
FORWARD LENGTH=1068
Length=1068
Score = 58.4 bits (31), Expect = 1e-07
Identities = 33/34 (97%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 527 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 560
|||| |||||||||||||||||||||||||||||
Sbjct 457 ATAGGTTGCTTTGATGTTAGGTCTGAGAAATTCA 490
> AT1G46840.1 | Symbols: | F-box family protein | chr1:17270185-17271706
FORWARD LENGTH=1428
Length=1428
Score = 56.5 bits (30), Expect = 5e-07
Identities = 34/36 (94%), Gaps = 0/36 (0%)
Strand=Plus/Plus
Query 460 AGGGATATGCATCAATGGAGTTTTGTATTACTTAGG 495
||||||||||||||||||||||||||||| | ||||
Sbjct 690 AGGGATATGCATCAATGGAGTTTTGTATTTCATAGG 725
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54116187510
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5