BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931350 Length=609 Score E Sequences producing significant alignments: (Bits) Value AT2G20270.2 | Symbols: | Thioredoxin superfamily protein | chr... 507 7e-143 > AT2G20270.2 | Symbols: | Thioredoxin superfamily protein | chr2:8737786-8739660 REVERSE LENGTH=879 Length=879 Score = 507 bits (274), Expect = 7e-143 Identities = 338/367 (92%), Gaps = 12/367 (3%) Strand=Plus/Plus Query 13 AAATCGCCATGGTAGCCGCAACAGTTAACCTCGCAAACATGACATGGACGTCGCTAAATT 72 ||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||| Sbjct 36 AAATCGCCATGGTAGCCGCAACAGTAAACCTCGCGAACATGACATGGACGTCGTTAAATT 95 Query 73 CAAATCCAGCACTCTCTTTCTCCATGTTAAGCGGAATCAGAAGCTTGGGTATGTTACCTT 132 ||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 96 CAAATCCAGCAATCTCTTTCTCCATGTTAAGCGGAATCAGAAACTTGGGCATGTTACCTT 155 Query 133 TGAGGAGATGTCTAAAGCCGACAGTAATCGGAATCGCGTCGTGGCCACCACAACGTTGTT 192 | ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct 156 TCAGGAGATGTCTAAAGCCGACAGTTATCGGAATCGCGTCGTGGCCACCACTCCGTTGTT 215 Query 193 CTTCTGTTAGGGCCATGTCTTCAT--TCG-----G-----ATCGACATTGGAGGAGACTA 240 ||||||||| ||| |||||||||| ||| | ||||||||||||||||||| Sbjct 216 CTTCTGTTAAGGCTATGTCTTCATCATCGTCTTCGTCTGGATCGACATTGGAGGAGACTG 275 Query 241 TTAAAACGACTGTGGCAGAGAACCCTGTCGTTGTTTACTCCAAAACCTATTGCTCATACT 300 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 276 TTAAAACGACTGTGGCAGAGAACCCTGTCGTTGTTTACTCCAAAACCTGGTGCTCATACT 335 Query 301 CGTCTGAAGTGAAGTCCTTGTTCAAGAGTCTTCAAGTTGAGCCACTGGTTGTTGAATTGG 360 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 336 CGTCTCAAGTGAAGTCCTTGTTCAAGAGTCTTCAAGTTGAGCCACTGGTTGTTGAATTGG 395 Query 361 ATGAACT 367 || |||| Sbjct 396 ATCAACT 402 Score = 316 bits (171), Expect = 1e-85 Identities = 193/204 (95%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 406 GTTCAGAGGGGCCGCAGCTGCAGAATGTGTTGGAGAAAATTACTGGACAATACACTGTTC 465 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 GTTCAGAAGGGTCGCAGCTGCAGAATGTGTTGGAGAAAATTACTGGACAATACACTGTTC 545 Query 466 CTAATGTTTTCATCGGAGGCAAGCACATTGGTGGCTGCTCAGATACATTGCAGCTGTACA 525 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 546 CCAATGTTTTCATCGGAGGCAAGCACATTGGTGGCTGCTCAGATACATTGCAGCTGCACA 605 Query 526 ATAAAGGAGAGCTGGAGGCAATGTTAGCTGAAGCCAATGGAAAAACCGGTCAAACCTAGA 585 |||||||||||||||| ||||| |||||||||||||||||||||| |||||| ||||||| Sbjct 606 ATAAAGGAGAGCTGGAAGCAATTTTAGCTGAAGCCAATGGAAAAAACGGTCAGACCTAGA 665 Query 586 GATTTTTACTGATGAAACTGGTTG 609 ||||| || |||||||||||||| Sbjct 666 GATTTCTAGAGATGAAACTGGTTG 689 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29336741848 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5