BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931451
Length=1684
Score E
Sequences producing significant alignments: (Bits) Value
AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase... 1511 0.0
AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase... 1432 0.0
AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase... 1131 0.0
AT1G36700.1 | Symbols: | pseudogene, hypothetical protein | ch... 479 4e-134
> AT4G03930.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr4:1870422-1872387 FORWARD LENGTH=1575
Length=1575
Score = 1511 bits (818), Expect = 0.0
Identities = 1304/1534 (85%), Gaps = 51/1534 (3%)
Strand=Plus/Plus
Query 144 GTTTGCAAAGGATA---TGACGACAAAAAATCATGTCAAAACCTTTTGTTGGAGCTCAAG 200
||| |||||| ||| ||| |||||| | |||||||||||| ||||||||||||| |||
Sbjct 58 GTTAGCAAAGAATATTGTGATGACAAACACTCATGTCAAAACTTTTTGTTGGAGCTTAAG 117
Query 201 A-TGGTATCCTCGTCACTTTCGGAGATGAGATGTCGTGATTTATTGATTGCCGTTTTAAA 259
| | | ||||||||||| |||||||| ||| ||||||| |||||||| |||||| ||
Sbjct 118 ACAGCT-TCCTCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAA 176
Query 260 GAACTCTGTGTC-GAGGATCAACATTGG-TATGCTTGGTGTGAGGGAAGACACGAAACTA 317
||| || ||| | || |||| ||| ||| |||| ||||||||| |||||| || |||| |
Sbjct 177 GAATTCCGTG-CGGAAGATCGACA-TGGCTATGATTGGTGTGATGGAAGATACAAAACAA 234
Query 318 CTTGAGGAGGTGGA-AAGT-AAAATGCT-TGGTTTGAGGGAGGACACAAATCTATTTGAG 374
| ||||||| |||| || | | || ||| | |||||| ||||||||||||||||||||||
Sbjct 235 CATGAGGAGATGGAGAA-TGATAA-GCTAT-GTTTGAAGGAGGACACAAATCTATTTGAG 291
Query 375 GAGATGATGAAGTCGGCAAAAGATAGGATGATCCGTTCAGTGGAGGAACTCTTAGGAGGA 434
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 292 GAGATGATGGAGTCGGCAAAAGATAGGATGATCCGTTCAGTGGAGGAACTCTTAGGAGGA 351
Query 435 GAAAGCCCTAATCTTGGATCTTACGAAAATGTCCACACTTGGATTAGTGGCGTTCTTACT 494
||| |||| ||||||||||||||||||| ||||||||||| | |||||||||||||||
Sbjct 352 GAATTCCCTTATCTTGGATCTTACGAAAACATCCACACTTGGCTCAGTGGCGTTCTTACT 411
Query 495 AGCTACATCACATGTACCGACGAAATTGGTGAAGGTGCCTATAAACGTCGGGTTGAGCCA 554
|||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 412 AGCTACATCACATGTATCGACGAAATTGGTGACGGTGCCTATAAACGTCGGGTCGAGCCA 471
Query 555 GAGCTTGAGGACCTCATTTCTAGGGCAAGAG-TAGCTTTGGC-CATTTTCATCTCCATTT 612
||||| | ||||||||||||| ||||| || |||||||||| | |||| ||||||||||
Sbjct 472 CAGCTTCAAGACCTCATTTCTAAGGCAA-AGGTAGCTTTGGCTCTTTTT-ATCTCCATTT 529
Query 613 CACCGAGAGACGACACCGAACTTAAGTCGGTGGTTTCCAATGGCCCGTCGTGGTTATC-C 671
| ||||||||| ||||||||||||| ||||||||| ||||| ||||||| |||||||| |
Sbjct 530 CGCCGAGAGACAACACCGAACTTAACTCGGTGGTTCCCAATAGCCCGTCTTGGTTATCTC 589
Query 672 AACGTTGACAAAAAATATCTATATCTTTAT-CGTGAGACTCTAAAGAAGATTGCCGATGT 730
| |||||||| ||| |||||||||| || | |||| ||||||| ||||||||||||||
Sbjct 590 AT-GTTGACAAGAAAGATCTATATCTCAATGC-TGAGGCTCTAAAAAAGATTGCCGATGT 647
Query 731 TGTGGTCGCGAAGGACGGGAGTGGAA-GTTACAACACAGTGAATGCGGCCATTGCAGCGG 789
|||||||||||| || |||| |||| || |||||||||||||||||||||||||||| |
Sbjct 648 TGTGGTCGCGAAAGATGGGACCGGAAAGT-ACAACACAGTGAATGCGGCCATTGCAGCAG 706
Query 790 CACCTAAATTCAGCCGA-AAGAGATTCGTCATCTATATAAAGACAGGCGTCTATGATGAA 848
||||| || ||||| | ||||||||| |||||||||||||||||||| | |||||||||
Sbjct 707 CACCTCAACACAGCC-ACAAGAGATTCATCATCTATATAAAGACAGGCATTTATGATGAA 765
Query 849 ATCGTCAACATTGGGATTAAGAAAGCCAATTTAACTCTCATCGGTGACAGTCAAGATTCA 908
|||||| ||||| || || |||| ||||||||||||| || ||||| |||||||||||
Sbjct 766 ATCGTCGCCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTCA 825
Query 909 ACTATCATCACGGGTAATTTAAGCTATAGCTATGGTAAAACGA-CTTTCTACACTGCAAC 967
|| ||||||||||| ||||||||| |||| ||| || || || | ||||||||||||||
Sbjct 826 ACCATCATCACGGGCAATTTAAGCGCTAGCAATGTTAGAA-GAACGTTCTACACTGCAAC 884
Query 968 TGTTGCTTCTAATGGTGACGGATTCATCGGAATAGACATGTGCTTTCGAAACACGGTCGG 1027
| |||||||||||||| | |||||||||||| ||||||||||||| ||||||||||||||
Sbjct 885 TTTTGCTTCTAATGGTAAAGGATTCATCGGAGTAGACATGTGCTTCCGAAACACGGTCGG 944
Query 1028 GCCGGCGAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCTATCATTCACCG 1087
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct 945 GCCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTACAG 1004
Query 1088 ATGTTGTATCGAGGGGTATCAGGATGCGTTGTATTCTCACAAACACCGCCAGTTTTATAG 1147
|||| || ||||||| ||||||||||| |||||| |||||| | ||||||||||||||||
Sbjct 1005 ATGTCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCACATAGACCGCCAGTTTTATAG 1064
Query 1148 GGAGTGCTTTATTACCGGCACTATAGATTTTATTTGTGGAAATGCTGCGGCGGTCTTCCA 1207
|||||||||||||||||| ||| ||||||| ||||||||||| || |||||||| || ||
Sbjct 1065 GGAGTGCTTTATTACCGGTACTGTAGATTTCATTTGTGGAAACGCAGCGGCGGTATTTCA 1124
Query 1208 ATTCTGCCAAATTGTTGCAAGAAAACCTA-TGAGGGGGCATAGCAATGTGATAACCGCTC 1266
||||||||| ||||| |||||| | |||| | | |||||| |||||| | ||||||||||
Sbjct 1125 ATTCTGCCAGATTGTAGCAAGACAGCCTAAT-ATGGGGCAAAGCAATTTCATAACCGCTC 1183
Query 1267 AGTCACGCGTA-AGTGAG-AGCGACAACTCCGGCTTCTCAATTCAGAAA-TGCAACATCA 1323
| ||||||| | | | || | |||||| || |||||||||||||| ||| ||||||||||
Sbjct 1184 AATCACGCG-AGACTAAGGA-CGACAAATCGGGCTTCTCAATTCA-AAACTGCAACATCA 1240
Query 1324 CTGCAAGTTCCGATATAGATCCTCTTAAATCAACCGTGAAGACATTTCTTGGTCGTTCAT 1383
| |||||||| ||| ||||| | | ||||||| || || | |||||| | | |
Sbjct 1241 CAGCAAGTTCGGATCTAGATAC----AG--CAACCGTAAAAACGTATCTTGGAAGGCCTT 1294
Query 1384 GGAGGAAATATTCAACAGTTGCAGTTCTACAATCTTTCAACGGTGATTTAGTTGATCATG 1443
|||||| || ||||||||| || ||||| || ||||||| ||||||||||||||||| |
Sbjct 1295 GGAGGATATTTTCAACAGTCGCGGTTCTGCAGTCTTTCATCGGTGATTTAGTTGATCCCG 1354
Query 1444 CAGGGTGGACTCCTTGGCAAGGAGAATTTGGTCTATCAACTCTCTACTACGGAGAATATC 1503
|||| |||||||||||| |||||||| |||||| ||||||||| ||||| | |||||||
Sbjct 1355 CAGGCTGGACTCCTTGGGAAGGAGAAACTGGTCTGTCAACTCTCCACTACCGCGAATATC 1414
Query 1504 AAAACAGAGGTCCAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGACAGGG-TTTAGAGTT 1562
|||| || ||||| |||||||||||||||| |||||| |||||| | ||| |||| ||||
Sbjct 1415 AAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTC-GGGCTTTAAAGTT 1473
Query 1563 ATTACGGATCCTAAAGAGGCTGCAAAATTCACTGTTA-CCAAGCTATTACTTGGGGAAT- 1620
|| | ||||||||| ||||| || |||||||||| | ||||||| ||| ||| |||
Sbjct 1474 ATGAAAGATCCTAAACAGGCTACAGAATTCACTGT-AGCCAAGCTCTTAGATGGAGAAAC 1532
Query 1621 TGTGGCTGAAAACAA-GTGGAGTTCCGTACaaaa 1653
| ||||| |||| || || || |||| || ||||
Sbjct 1533 T-TGGCT-AAAAGAAAGTCGAATTCCATATAAAA 1564
> AT1G11590.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr1:3892580-3894677 FORWARD LENGTH=1686
Length=1686
Score = 1432 bits (775), Expect = 0.0
Identities = 1255/1485 (85%), Gaps = 39/1485 (3%)
Strand=Plus/Plus
Query 144 GTTTGCAAAGGATA---TGACGACAAAAAATCATGTCAAAACCTTTTGTTGGAGCTCAA- 199
||| |||||| ||| ||| |||||| | |||||||||||| ||||||||||||| ||
Sbjct 112 GTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACTTTTTGTTGGAGCTTAAG 171
Query 200 GATGGTATCCTCGTCACTTTCGGAGATGAGATGTCGTGATTTATTGATTGCCGTTTTAAA 259
| ||| || |||||||| |||||||| ||| ||||||| |||||||| |||||| ||
Sbjct 172 GCGGGT-TCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAA 230
Query 260 GAACTCTGTGTC-GAGGATCAACATTGG-TATGCTTGGTGTGAGGGAAGACACGAAACTA 317
||| || || | ||||||| ||| ||| |||| ||||||||| ||| || || |||| |
Sbjct 231 GAATTCCGT-ACGGAGGATCGACA-TGGTTATGATTGGTGTGATGGATGATACAAAACAA 288
Query 318 CTTGAGGAGGTGGA-AAGTAAAATGCTTGGTTTGAGGGAGGACACAAATCTATTTGAGGA 376
| ||||||| |||| || | | |||||||| ||| |||||||||||| |||||||||||
Sbjct 289 CATGAGGAGATGGAGAA-TGATTTGCTTGGTGTGAAGGAGGACACAAAACTATTTGAGGA 347
Query 377 GATGATGAAGTCGGCAAAAGATAGGATGATCCGTTCAGTGGAGGAACTCTTAGGAGGAGA 436
||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 348 GATGATGGAGTCGACAAAAGATAGGATGATCCGTTCGGTGGAGGAACTCTTAGGAGGAGA 407
Query 437 AAGCCCTAATCTTGGATCTTACGAAAATGTCCACACTTGGATTAGTGGCGTTCTTACTAG 496
| ||||||| |||||||||||| || |||||||||||| | ||| |||||||||||||
Sbjct 408 ATTTCCTAATCGTGGATCTTACGAGAACGTCCACACTTGGCTCAGTAGCGTTCTTACTAG 467
Query 497 CTACATCACATGTACCGACGAAATTGGTGAAGGTGCCTATAAACGTCGGGTTGAGCCAGA 556
||||||||||||| |||||||||||||||||||||||||||||| || || |||||| |
Sbjct 468 TTACATCACATGTATCGACGAAATTGGTGAAGGTGCCTATAAACGCCGTGTCGAGCCAAA 527
Query 557 GCTTGAGGACCTCATTTCTAGGGCAAGAGTAGCTTTGGC-CAT-TTTCATCTCCATTTCA 614
|||||| ||||||||||||||||||||| |||||||||| | | ||| ||||||||||||
Sbjct 528 GCTTGAAGACCTCATTTCTAGGGCAAGAATAGCTTTGGCTC-TCTTT-ATCTCCATTTCA 585
Query 615 CCGAGAGACGACACCGAACTTAAGTCGGTGGTTTCCAATGGCCCGTCGTGGTTA-TCCAA 673
||||||||| |||||||||||| |||||| || ||||| |||| || |||||| ||| |
Sbjct 586 CCGAGAGACAACACCGAACTTATCTCGGTGATTCCCAATAGCCCTTCTTGGTTATTCC-A 644
Query 674 CGTTGACAAAAAATATCTATATCTTTATCG-TGAGACTCTAAAGAAGATTGCCGATGTTG 732
|||||||| ||| |||||||||| || | |||| |||||||||||||||| |||||||
Sbjct 645 TGTTGACAAGAAAGATCTATATCTCAAT-GCTGAGGCTCTAAAGAAGATTGCTGATGTTG 703
Query 733 TGGTCGCGAAGGACGGGAGTGG-AAGTTACAACACAGTGAATGCGGCCATTGCAGCGGCA 791
||||||||||||| |||| || ||| |||| ||||||||||||||||||||||||||||
Sbjct 704 TGGTCGCGAAGGATGGGACCGGAAAG-TACAGCACAGTGAATGCGGCCATTGCAGCGGCA 762
Query 792 CCTAAATTCAGCCGAAAGAGATTCGTCATCTATATAAAGACAGGCGTCTATGATGAAATC 851
||| || ||||| ||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct 763 CCTCAACACAGCCAAAAGAGATTCGTCATCTATATAAAGACAGGCATTTATGATGAAATC 822
Query 852 GTCAACATTGGGATTAAGAAAGCCAATTTAACTCTCATCGGTGACAGTCAAGATTCAACT 911
||| ||||| || || |||| ||||||||||||| || ||||| ||||||||| |||
Sbjct 823 GTCGTCATTGAGAATACGAAACCCAATTTAACTCTTATAGGTGATGGTCAAGATTTAACC 882
Query 912 ATCATCACGGGTAATTTAAGCT-ATAGCTATGGTAAAACG-ACTTTCTACACTGCAACTG 969
||||||||| | |||||||| | |||| ||| || || | || ||| |||| |||||||
Sbjct 883 ATCATCACGAGCAATTTAAG-TGCTAGCAATGTTAGAA-GAACGTTCAACACCGCAACTG 940
Query 970 TTGCTTCTAATGGTGACGGATTCATCGGAATAGACATGTGCTTTCGAAACACGGTCGGGC 1029
|||||||||||||| | |||||||||||| ||||||||||||| |||||||||| |||||
Sbjct 941 TTGCTTCTAATGGTAATGGATTCATCGGAGTAGACATGTGCTTCCGAAACACGGCCGGGC 1000
Query 1030 CGGCGAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCTATCATTCACCGAT 1089
|||| ||||||||||||||||||||||||||||||||||||||||| ||||| | |||
Sbjct 1001 CGGCAAAAGGACCAGCTGTTGCCCTCCGTGTGAGTGGTGATATGTCCGTCATTTATAGAT 1060
Query 1090 GTTGTATCGAGGGGTATCAGGATGCGTTGTATTCTCACAAACACCGCCAGTTTTATAGGG 1149
| || ||||||| ||||||||||| |||||| |||||| |||||||||||||||| |
Sbjct 1061 GCCGTGTCGAGGGATATCAGGATGCCTTGTATCCTCACAGTGACCGCCAGTTTTATAGAG 1120
Query 1150 AGTGCTTTATTACCGGCACTATAGATTTTATTTGTGGAAATGCTGCGGCGGTCTTCCAAT 1209
|||||||||||||||||||| ||||||| |||||||| || || | ||||||||| ||||
Sbjct 1121 AGTGCTTTATTACCGGCACTGTAGATTTCATTTGTGGGAACGCGGTGGCGGTCTTTCAAT 1180
Query 1210 TCTGCCAAATTGTTGCAAGAAAACCTATGAGGGGGCATAGCAATGTGATAACCGCTCAGT 1269
||||||| ||||| |||||| |||||| || |||||| |||||||| |||||||||||||
Sbjct 1181 TCTGCCAGATTGTAGCAAGACAACCTAAGATGGGGCAGAGCAATGTCATAACCGCTCAGT 1240
Query 1270 CACGCGTAAGTGAGAGCGACA---ACTCCGGCTTCTCAATTCAGAAATGCAACATCACTG 1326
|||||| | | | || |||| |||| |||||| | ||||| ||||||||||| ||||
Sbjct 1241 CACGCGCATTT-A-AG-GACATTTACTCGGGCTTCACGATTCAAAAATGCAACATTACTG 1297
Query 1327 CAAGTTCCGATATAGATCCTCTTAAATCAACCGTGAAGACATTTCTTGGTCGTTCATGGA 1386
|||| || ||| |||| | | | ||||||| || || | |||||| | | ||||
Sbjct 1298 CAAGCTCGGATCTAGA-CA-CG-A---CAACCGTTAAAACGTATCTTGGAAGACCTTGGA 1351
Query 1387 GGAAATATTCAACAGTTGCAGTTCTACAATCTTTCAACGGTGATTTAGTTGATCATGCAG 1446
||| || ||||||||| |||||| | || ||||||| ||||||||||||||||| || |
Sbjct 1352 GGATATTTTCAACAGTCGCAGTTATGCAGTCTTTCATCGGTGATTTAGTTGATCCCGCTG 1411
Query 1447 GGTGGACTCCTTGGCAAGGAGAATTTGGTCTATCAACTCTCTACTACGGAGAATATCAAA 1506
| |||||||||||| |||||||| |||| | ||||||||| ||||| | ||||||||||
Sbjct 1412 GCTGGACTCCTTGGGAAGGAGAAACTGGTTTGTCAACTCTCCACTACCGCGAATATCAAA 1471
Query 1507 ACAGAGGTCCAGGAGCTGTGACTAGCAAAAGGGTAAAGTGGACAGGGTTTAGAGTTATTA 1566
|||| |||||||||||||||||||||| |||||| |||||| |||| |||| |||||| |
Sbjct 1472 ACAGGGGTCCAGGAGCTGTGACTAGCAGAAGGGTGAAGTGGTCAGGCTTTAAAGTTATGA 1531
Query 1567 CGGATCCTAAAGAGGCTGCAAAATTCACTGTTA-CCAAGCTATTA 1610
||||||||| ||||| || |||||||||| | ||||||| |||
Sbjct 1532 AAGATCCTAAACAGGCTACAGAATTCACTGT-AGCCAAGCTCTTA 1575
> AT3G27980.1 | Symbols: | Plant invertase/pectin methylesterase
inhibitor superfamily | chr3:10393904-10395861 FORWARD LENGTH=1494
Length=1494
Score = 1131 bits (612), Expect = 0.0
Identities = 1003/1189 (84%), Gaps = 38/1189 (3%)
Strand=Plus/Plus
Query 467 CCACACTTGGATTAGTGGCGTTCTTACTAGCTACATCACATGTACCGACGAAATTGGTGA 526
|||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 315 CCACACTTGGCTTAGTAGCGTTCTTACTAGCTACATCACATGTATCGACGAAATTGGTGA 374
Query 527 AGGTGCCTATAAACGTCGGGTTGAGCCAGAGCTTGAGGACCTCATTTCTAGGGCAAGAGT 586
||||||||||||||| ||||| |||||| ||||||| ||||||||||||||||||||||
Sbjct 375 AGGTGCCTATAAACGCCGGGTCGAGCCAAAGCTTGAAAACCTCATTTCTAGGGCAAGAGT 434
Query 587 AGCTTTGGC-CATTTTCATCTCCATTTCACCGAGAGACGACACCGAACTTAAGTCGGTGG 645
|| |||||| | |||| ||||||||||||| ||||||| |||||||||||| ||||||
Sbjct 435 AGTTTTGGCTC-TTTTTATCTCCATTTCACTGAGAGACAACACCGAACTTATCTCGGTGA 493
Query 646 TTTCCAATGGCCCGTCGTGGTTA-TCCAACGTTGACAAAAAATATCTATATCTTTATCGT 704
|| |||||||||| || |||||| ||| | |||||||| ||| ||||||||| ||
Sbjct 494 TTCCCAATGGCCCTTCTTGGTTATTCC-ATGTTGACAAGAAAGATCTATATC----TC-- 546
Query 705 GAGACT-CTAAAGAAGATTGCCGATGTTGTGGTCGCGAAGGACGGGAGTGG-AAGTTACA 762
| | | || | ||||||| |||||||||||||||||||| |||| || ||| ||||
Sbjct 547 -A-A-TGCT---G-AGATTGCTGATGTTGTGGTCGCGAAGGATGGGACCGGAAAG-TACA 598
Query 763 ACACAGTGAATGCGGCCATTGCAGCGGCACCTAAATTCAGCCGAAAGAGATTCGTCATCT 822
||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 599 GCACAGTGAATGCGGCCATTGCAGCGGCACCTCAACACAGCCAAAAGAGATTCGTCATCT 658
Query 823 ATATAAAGACAGGCGTCTATGATGAAATCGTCAACATTGGGATTAAGAAAGCCAATTTAA 882
|||||||||||||| | ||||||||||||||| ||||| || || |||| |||||||||
Sbjct 659 ATATAAAGACAGGCATTTATGATGAAATCGTCGTCATTGAGAATACGAAACCCAATTTAA 718
Query 883 CTCTCATCGGTGACAGTCAAGATTCAACTATCATCACGGGTAATTTAAGCTATAGCTATG 942
|||| || ||||| ||||||||| ||| |||||||| || ||||||||| |||| |||
Sbjct 719 CTCTTATAGGTGATGGTCAAGATTTAACCATCATCACAGGCAATTTAAGCGCTAGCAATG 778
Query 943 GTAAAACG-ACTTTCTACACTGCAACTGTTGCTTCTAATGGTGACGGATTCATCGGAATA 1001
|| || | || | | |||| ||||||||||||||||||||| | |||||||||||| ||
Sbjct 779 TTAGAA-GAACGTACAACACCGCAACTGTTGCTTCTAATGGTAATGGATTCATCGGAGTA 837
Query 1002 GACATGTGCTTTCGAAACACGGTCGGGCCGGCGAAAGGACCAGCTGTTGCCCTCCGTGTG 1061
|||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||
Sbjct 838 GACATGTGCTTTCGAAACACGGCCGGACCGGCAAAAGGACCAGCTGTTGCCCTCCGTGTG 897
Query 1062 AGTGGTGATATGTCTATCATTCACCGATGTTGTATCGAGGGGTATCAGGATGCGTTGTAT 1121
|||||||||||||| ||||| | ||||| || ||||||| ||||||||||| ||||||
Sbjct 898 AGTGGTGATATGTCCGTCATTTATAGATGTCGTGTCGAGGGATATCAGGATGCCTTGTAT 957
Query 1122 TCTCACAAACACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTATAGATTTTATT 1181
|||| | |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 958 CCTCATAGTGACCGCCAGTTTTATAGGGAGTGCTTTATTACCGGCACTGTAGATTTTATA 1017
Query 1182 TGTGGAAATGCTGCGGCGGTCTTCCAATTCTGCCAAATTGTTGCAAGAAAACCTATGAGG 1241
|||||||| || | ||||||||| ||||||||||| ||||| |||||| | |||| || |
Sbjct 1018 TGTGGAAACGCGGTGGCGGTCTTTCAATTCTGCCAGATTGTAGCAAGACAGCCTAAGATG 1077
Query 1242 GGGCATAGCAATGTGATAACCGCTCAGTCACGCGTAAGTGAG-AGCGACAACTCCGGCTT 1300
||||| |||||||| ||||||||||| ||||||| | | || | || ||| || |||||
Sbjct 1078 GGGCAGAGCAATGTCATAACCGCTCAATCACGCGCGACTAAGGA-CGTCAAATCGGGCTT 1136
Query 1301 CTCAATTCAGAAA-TGCAACATCACTGCAAGTTCCGATATAGATCCTCTTAAATCAACCG 1359
||||||||| ||| ||||||||||| ||||||| ||| ||||| | | ||||||
Sbjct 1137 CTCAATTCA-AAACTGCAACATCACAACAAGTTCGGATCTAGATAC----AG--CAACCG 1189
Query 1360 TGAAGACATTTCTTGGTCGTTCATGGAGGAAATATTCAACAGTTGCAGTTCTACAATCTT 1419
| || || | |||||| | | ||||||| || ||||||||| || ||||| |||||||
Sbjct 1190 TAAAAACGTATCTTGGAAGACCTTGGAGGAGATTTTCAACAGTCGCGGTTCTGCAATCTT 1249
Query 1420 TCAACGGTGATTTAGTTGATCATGCAGGGTGGACTCCTTGGCAAGGAGAATTTGGTCTAT 1479
||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||
Sbjct 1250 TCATCGGTGATTTAGTTGATCCCGCAGGCTGGACTCCTTGGAAAGGAGAAACTGGTCTAT 1309
Query 1480 CAACTCTCTACTACGGAGAATATCAAAACAGAGGTCCAGGAGCTGTGACTAGCAAAAGGG 1539
|||||||| ||||| | ||||||||||| || ||||| |||||||||||||||| |||||
Sbjct 1310 CAACTCTCCACTACCGCGAATATCAAAATAGGGGTCCGGGAGCTGTGACTAGCAGAAGGG 1369
Query 1540 TAAAGTGGACAGGGTTTAGAGTTATTACGGATCCTAAAGAGGCTGCAAAATTCACTGTTA 1599
| |||||| |||| |||| |||||| | ||||||||| ||||| || |||||||||| |
Sbjct 1370 TGAAGTGGTCAGGATTTAAAGTTATGAAAGATCCTAAAAAGGCTACAGAATTCACTGT-A 1428
Query 1600 -CCAAGCTATTACTTGGGGAAT-TGTGGCTGAAA-ACAAGTGGAGTTCC 1645
||||||| ||| ||| ||| | ||||||||| | |||| || ||||
Sbjct 1429 GCCAAGCTCTTAGATGGAGAAACT-TGGCTGAAAGA-AAGTCGAATTCC 1475
Score = 204 bits (110), Expect = 3e-51
Identities = 208/254 (82%), Gaps = 11/254 (4%)
Strand=Plus/Plus
Query 144 GTTTGCAAAGGATA---TGACGACAAAAAATCATGTCAAAACCTTTTGTTGGAGCTCAA- 199
||| |||||| ||| ||| |||||| | |||||||||||||||||||||||||| ||
Sbjct 55 GTTAGCAAAGAATATTGTGATGACAAACAGTCATGTCAAAACCTTTTGTTGGAGCTTAAG 114
Query 200 GATGGTATCCTCGTCACTTTCGGAGATGAGATGTCGTGATTTATTGATTGCCGTTTTAAA 259
| ||| || |||||||| |||||||| ||| ||||||| |||||||| |||||| ||
Sbjct 115 GCGGGT-TCATCGTCACTCTCGGAGATTAGACGTCGTGACTTATTGATCATCGTTTTGAA 173
Query 260 GAACTCTGTGTC-GAGGATCAACATTGG-TATGCTTGGTGTGAGGGAAGACACGAAACTA 317
||| || || | ||||||| ||| ||| |||| ||||||||| ||| || || |||| |
Sbjct 174 GAATTCCGT-ACGGAGGATCGACA-TGGCTATGATTGGTGTGATGGATGATACAAAACAA 231
Query 318 CTTGAGGAGGTGGA-AAGTAAAATGCTTGGTTTGAGGGAGGACACAAATCTATTTGAGGA 376
| ||| ||| |||| || | | ||||||||| ||| ||||||||||||||||||||||||
Sbjct 232 CATGAAGAGATGGAGAA-TGATATGCTTGGTGTGAAGGAGGACACAAATCTATTTGAGGA 290
Query 377 GATGATGAAGTCGG 390
||||||| ||||||
Sbjct 291 GATGATGGAGTCGG 304
> AT1G36700.1 | Symbols: | pseudogene, hypothetical protein |
chr1:13877990-13878553 REVERSE LENGTH=564
Length=564
Score = 479 bits (259), Expect = 4e-134
Identities = 409/478 (86%), Gaps = 23/478 (5%)
Strand=Plus/Plus
Query 164 CAAAAAATCATGTCAAAACCTTTTGTTGGAGCTCAAGATGGTATCCTCGTCACTTTCGGA 223
|||| | |||||||||||| ||||||||||||| |||| || ||||||||||| || |
Sbjct 77 CAAACAGTCATGTCAAAACTTTTTGTTGGAGCTTAAGACAGTTTCCTCGTCACTCTCAAA 136
Query 224 GATGAGATGTCGTGATTTATTGATTGCCGTTTTAAAGAACTCTGTGTCGAGGATCAACAT 283
||||||| | ||||| |||||||| |||||| ||||| || ||| ||||||| |||
Sbjct 137 GATGAGACGCCGTGACTTATTGATCATCGTTTTGAAGAATTCCGTG-CGAGGATTGACA- 194
Query 284 TGG-TATGCTTGGTGTGAGGGAAGACACGAAACTACTTGAGGAGGTGGA-AAGTAAAATG 341
||| |||| ||||||||| |||||| || |||| |||||||||| |||| || | | |||
Sbjct 195 TGGCTATGATTGGTGTGATGGAAGAGACAAAACAACTTGAGGAGATGGAGAA-TGATATG 253
Query 342 CTTGGTTTGAGGGAGGACACAAATCTATTTGAGGAGATGATGAAGTCGGCAAAAGATAGG 401
|||||| ||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||
Sbjct 254 CTTGGTGTGAAGGAGGACACAAATCTATTTGAAGAGATGATGGAGTTGGCAAAAGATAGG 313
Query 402 ATGATCCGTTCAGTGGAGGAACTCTTAGGAGGAGAAAGCCCTAATCTTGGATCTTACGAA 461
||||| | | || | ||||||||||||||||||||||||||||||||||||
Sbjct 314 ATGAT-C---C-GT--------T-TTAGGAGGAGAAAGCCCTAATCTTGGATCTTACGAA 359
Query 462 AATGTCCACACTTGGATTAGTGGCGTTCTTACTAGCTACATCACATGTACCGACGAAATT 521
|| |||||||||| | ||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 360 AACGTCCACACTTAGCTTAGTGGCGTTCTTACTAGCTACATCACATGTATCAACGAAATT 419
Query 522 GGTGAAGGTGCCTATAAACG-TCGGGTTGAGCCAGAGCTTGAGGACCTCATTTCTAGGGC 580
|||||||||||||||||||| | |||| |||||| | |||||||||||||||||||||||
Sbjct 420 GGTGAAGGTGCCTATAAACGAT-GGGTCGAGCCATACCTTGAGGACCTCATTTCTAGGGC 478
Query 581 AAGAGTAGCTTTGG-CCATTTTCATCTCCATTTCACCGAGAGACGACACCGAACTTAA 637
|||||||||||||| || |||| ||||||||||| ||||||||| ||||| |||||||
Sbjct 479 AAGAGTAGCTTTGGTCCTTTTT-ATCTCCATTTCCCCGAGAGACAACACCAAACTTAA 535
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83232503610
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5