BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931483 Length=373 Score E Sequences producing significant alignments: (Bits) Value AT2G16580.1 | Symbols: | SAUR-like auxin-responsive protein fa... 569 5e-162 AT4G34760.1 | Symbols: | SAUR-like auxin-responsive protein fa... 335 2e-91 > AT2G16580.1 | Symbols: | SAUR-like auxin-responsive protein family | chr2:7184422-7186968 REVERSE LENGTH=893 Length=893 Score = 569 bits (308), Expect = 5e-162 Identities = 351/371 (95%), Gaps = 5/371 (1%) Strand=Plus/Plus Query 1 AAACCCACCCAAAAACAAAAATGGCCATCCTTAAGAAATCTACAAAACTGGCTCAAACAG 60 ||| ||||| ||||||||||||| |||| || |||||||||||||||||||||||||||| Sbjct 22 AAA-CCACCAAAAAACAAAAATGTCCATTCTCAAGAAATCTACAAAACTGGCTCAAACAG 80 Query 61 CAATGCTTAGGCAGATTCTGAAGAGATGTTCAAGCTTAGGTAAGAAGAAT---GGAGGAG 117 ||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||| Sbjct 81 CAATGCTTAGGCAGATTCTGAAGAGATGTTCAAGCTTGGGGAAGAAGAATGGAGGAGGAG 140 Query 118 GATACGAAGAAGATGATCTCCCACTTGATGTACCAAAGGGACACTTCCCTGTCTATGTAG 177 |||| ||||||| ||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 141 GATATGAAGAAGTTGATCTCCCACTTGATGTACCCAAGGGACACTTCCCTGTCTACGTAG 200 Query 178 GACACAACAGAAGCAGATACATAGTTCCTATCTCTTTCTTGTCCAATCTTGACTTCCAAT 237 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 201 GACACAACAGAAGCAGATACATAGTTCCTATCTCTTTCTTGACCAATCTTGACTTCCAAT 260 Query 238 GTCTCCTTAGAAGAGCTGAGGAAGAGTTTGGTTTTGATCATGACATGGGTCTCACCATTC 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 261 GTCTCCTTAGAAGAGCTGAGGAAGAGTTTGGTTTTGATCATGACATGGGTCTCACCATTC 320 Query 298 CTTGTGATGAACTCTTCTTTCAAGATCTGACTTCCATGATCAGATGAGATCTCAAAAGTT 357 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 321 CTTGTGATGAACTCTTCTTTCAAGATCTGACTTCCATGATCCGATGAGATCTCAACAGTT 380 Query 358 TTAAGAA-CAA 367 | || || ||| Sbjct 381 TGAATAATCAA 391 > AT4G34760.1 | Symbols: | SAUR-like auxin-responsive protein family | chr4:16582183-16582879 REVERSE LENGTH=697 Length=697 Score = 335 bits (181), Expect = 2e-91 Identities = 310/371 (84%), Gaps = 13/371 (4%) Strand=Plus/Plus Query 8 CCCAAAAACAAAAATGGCCATCCTTAAGAAATCTACAAAACTGGCTCAAACAGCAATGCT 67 ||||||||| ||||||| || | |||||| || ||||||| |||||||||||||||| Sbjct 75 CCCAAAAAC--AAATGGCTATAATGAAGAAAACTTCAAAACTCACTCAAACAGCAATGCT 132 Query 68 TAGGCAGATTCTGAAGAGATGTTCAAGCTTAGGTAAGAAGAATGGAGGAGGATACGAAGA 127 | |||||||||||||||||| || |||||||| ||||||||||||||||| ||||| || Sbjct 133 GAAGCAGATTCTGAAGAGATGCTCGAGCTTAGGGAAGAAGAATGGAGGAGGGTACGATGA 192 Query 128 AGA-TGATCTCCCACTTGATGTACCAAAGGGACACTTCCCTGTCTATGTAGGACACAACA 186 ||| || || || ||||| ||||||||||||||||||||||||||||| ||| | |||| Sbjct 193 AGATTG-CCTTCCGCTTGACGTACCAAAGGGACACTTCCCTGTCTATGTCGGAGAGAACA 251 Query 187 GAAGCAGATACATAGTTCCTATCTCTTTCTTGTCCA-ATCTTGACTTCCAATGTCTCCTT 245 ||||||||||||| || || ||||| |||||| || ||| ||| ||||||| ||| ||| Sbjct 252 GAAGCAGATACATTGTCCCAATCTCCTTCTTG-ACACATCCTGAGTTCCAATCTCT-CTT 309 Query 246 AGAA-GAGCTGAGGAAGAGTTTGGTTTTGATCATGACATGGGTCTCACCATTCCTTGTGA 304 | || |||| |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 310 ACAACGAGCCGAGGAAGAATTTGGATTCGATCACGACATGGGTCTCACCATTCCTTGTGA 369 Query 305 TGAACTC-TTCTTTCAAGATC-TGACTTCCATGATCAGATGAGATCTCAAAAGTTTTAAG 362 ||||||| || |||||| | | | || ||||||||| ||||| || | | | ||| ||| Sbjct 370 TGAACTCGTT-TTTCAA-ACCCTAACATCCATGATCCGATGATATTTTATCA-TTTGAAG 426 Query 363 AACAAGAAGAA 373 || ||| |||| Sbjct 427 AAGAAGCAGAA 437 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17543444401 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5