BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931495
Length=1678
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16660.1 | Symbols: | Major facilitator superfamily protein... 2623 0.0
AT4G34950.1 | Symbols: | Major facilitator superfamily protein... 588 6e-167
> AT2G16660.1 | Symbols: | Major facilitator superfamily protein
| chr2:7218706-7221625 REVERSE LENGTH=1898
Length=1898
Score = 2623 bits (1420), Expect = 0.0
Identities = 1597/1683 (95%), Gaps = 9/1683 (1%)
Strand=Plus/Plus
Query 1 TTTCTCTTCTT-TTTCTACAAATGGGTTTCCAAAGATCTATCTCTTCTTCTTCTGCATTG 59
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13 TTTCTCATCTTCTTTCTACAAATGGGTTTCCAAAGATCTATCTCTTCTTCTTCTGCATTA 72
Query 60 AAATGGCTTGGATTTGTAACGGCTGTTTGGGTTCAAGCCATCTCCGGCAACAACTACACT 119
|||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||
Sbjct 73 AAATGGCTTGGATTTGTAACAGCGGTTTGGGTTCAATCCATCTCCGGCAACAACTACACT 132
Query 120 TTTTCAAACTACTCCGGTGCTCTTAAGTCTCTCATGAATCTCAACCAGCTCGAGCTCAAC 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 TTTTCAAACTACTCCGGTGCTCTTAAGTCTCTCATGAATCTCAACCAGCTCGAGCTCAAC 192
Query 180 AACCTCTCTGTCGCTAAAGACGTTGGAAAAGCCTTTGGGATCCTCGCTGGCCTTGCCTCT 239
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 193 AACCTCTCTGTCGCTAAAGACGTCGGAAAAGCCTTTGGGATCCTGGCTGGCCTTGCCTCT 252
Query 240 GACCGTCTTCCTACTCCTGTCATCCTTCTTATTGGTTGTTTTGAAGGACTTCTCGGTTAT 299
||||||||||| ||||| |||||||| ||||||||||| |||||||| ||||| ||||||
Sbjct 253 GACCGTCTTCCCACTCCGGTCATCCTCCTTATTGGTTGCTTTGAAGGTCTTCTTGGTTAT 312
Query 300 GGTGTACAATGGCTTGTTGTTAGCCGCACCATCCAACCAATCCCTTATTGGCAGATGTGT 359
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 GGTGTACAATGGCTCGTTGTTAGCCGCACCATCCAACCAATCCCTTATTGGCAGATGTGT 372
Query 360 ATATTCCTCTGTATGGGAGGGAACAGCACAACGTGGATGAACACGGCGGTTTTAGTGACT 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 373 ATATTCCTCTGTATGGGAGGGAACAGCACAACGTGGATGAACACGGCGGTTCTAGTGACT 432
Query 420 TGCATACGCAATTTCCGACGAAACCGTGGTCCTGTCTCCGGGATCTTGAAAGGATATGTC 479
|||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 433 TGCATACGCAATTTTCGACGAAACCGTGGTCCGGTCTCCGGGATATTGAAAGGATATGTC 492
Query 480 GGCCTAAGCACAGCTATATTCACCGACCTATGCACTGCTCTGTTCTCAAACGATCCGGCG 539
|| ||||||||||||||||||| || || || |||||||||||||||||||||||||||
Sbjct 493 GGTTTAAGCACAGCTATATTCACTGATCTCTGTACTGCTCTGTTCTCAAACGATCCGGCG 552
Query 540 TCGTTTTTGGTTTTGCTCGCAGTCATCCCTTTCGCGGTCTGTCTCACGGCGGTTTTCTTC 599
|||||||||||||| || || || | ||||| || || |||||||||||||||||||||
Sbjct 553 TCGTTTTTGGTTTTACTAGCCGTGGTGCCTTTTGCCGTATGTCTCACGGCGGTTTTCTTC 612
Query 600 CTCCGTGAGATCCCACCTGCTTCTTCTGCCGCCGAGGAGAACGAAGAGACTCGCTACTTT 659
||||||||||||||||| || ||||| || || |||||||||||||||||||| ||||||
Sbjct 613 CTCCGTGAGATCCCACCAGCATCTTCCGCAGCTGAGGAGAACGAAGAGACTCGTTACTTT 672
Query 660 ACTATATTCAACATTGTGGCCGTCGTTGTCGCCGTGTATCTTCAGTCTTACGACATCATC 719
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 673 ACCATATTCAACATTGTGGCCGTTGTTGTCGCCGTGTATCTTCAGTCTTACGACATCATT 732
Query 720 GGAATCAAAACTGGAGTGTTCTCTGTTGCTTTCGCCTCCATACTTCTCTTCCTCTTGGCT 779
|||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 733 GGAATCAAAACTGGAGTGTTCTCTGTCGCTTTCGCTTCTATACTTCTCTTCCTCTTGGCT 792
Query 780 TCTCCAATCGCCATTCCTTTCCACTCTTTCATCAAGAGCTTGAATC-ACGGTGAACAAGA 838
|||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct 793 TCTCCAATAGCCATTCCTTTCCACTCCTTCATCAAGAGCTTGAA-CTACGGTGAACAAGA 851
Query 839 TGACTTAGAAGAACGGATTCAAGAACCGTTGCTTAGATCCGAGATCGCGGCAGCGGAGAG 898
||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 852 TGACTTAGAAGGACGGATTCAAGAACCGTTGCTTAGATCCGAGATAGCGGCAGCGGAGAA 911
Query 899 AGAAGTGGTCGTTGTAGCTGCGGTGGCAGCTGAACa--agaag-agaagaagaagaaACC 955
|||||| | |||||||||||||||||||| ||| | || || |||||| |||||||||
Sbjct 912 AGAAGTAATAGTTGTAGCTGCGGTGGCAGCGGAAGAGGAGGAGAAGAAGAGGAAGAAACC 971
Query 956 GGTGTTGGGAGAAGACCACACTATAATGGAAGCAGTTTTGACCGTTGACTTTTGGGTGCT 1015
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 972 GGTTTTGGGAGAAGACCACACTATAATGGAAGCAGTGTTGACCGTTGACTTTTGGGTGCT 1031
Query 1016 TTTTGTGTCCTTCTTGTGTGGTGTAGGAACTGGTTTAGCTGTGATGAACAATATGGGTCA 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1032 TTTTGTGTCCTTCTTGTGTGGTGTAGGAACTGGTTTAGCTGTGATGAACAATATGGGTCA 1091
Query 1076 GATAGGTCTTGCCCTTGGATACACAAATGTTTCAATCTTTGTCTCCATGACTAGTATTTG 1135
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1092 GATAGGTCTTGCCCTTGGATACACAAATGTCTCAATCTTTGTCTCCATGACTAGTATTTG 1151
Query 1136 GGGATTCTTCGGTCGCATTCTCTCCGGTACTCTCTCCGAATACTTTCTCAAGAAAGCTGG 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1152 GGGATTCTTCGGTCGCATTCTCTCCGGTACTCTCTCCGAATACTTTCTCAAGAAAGCTGG 1211
Query 1196 AACACCAAGACCACTATGGAATGCAGCCTCTCAAATCCTTATGGCCGTAGGATATATACT 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1212 AACACCAAGACCACTATGGAATGCAGCCTCTCAAATCCTTATGGCCGTAGGATATATACT 1271
Query 1256 AATGGCTTTAGCCGTGCCTAATTCACTCTACATTGGTTCAATGGTGGTTGGAGTTTGTTA 1315
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1272 AATGGCTTTAGCCGTGCCTAATTCACTCTACATCGGTTCAATGGTGGTTGGAGTATGTTA 1331
Query 1316 CGGTGTCCGTCTAGCCATAACCGTACCAACAGCATCTGAACTCTTTGGTCTCAAATACTA 1375
||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct 1332 CGGTGTCCGTCTAGCCATAACTGTACCAACAGCTTCCGAACTCTTTGGTCTCAAATACTA 1391
Query 1376 CGGTCTCATCTACAACATTTTAGTACTTAACTTGCCACTTGGCTCGTTCCTCTTCTCGGG 1435
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1392 CGGTCTCATCTACAACATCTTAGTACTTAACTTGCCACTTGGCTCGTTTCTCTTCTCGGG 1451
Query 1436 TCTCCTCGCTGGCTTCCTCTATGATGCAGAGGCTACACCAACTCCTGGTGGGGGCAACAC 1495
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1452 TCTCCTCGCTGGCTTCCTCTACGATGCAGAGGCAACACCAACTCCTGGTGGGGGCAACAC 1511
Query 1496 GTGCGTAGGAGCTCATTGTTACCGTCTCATTTTCATAGTCATGGCATTAGCTTCTGTTAT 1555
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1512 GTGCGTAGGAGCTCATTGCTACCGTCTCATCTTCATAGTCATGGCATTAGCTTCTGTTAT 1571
Query 1556 TGGAGTCGGTTTGGATCTTGTGTTGGCTTATAGGACGAAGGAGATTTACGCTAAGATTCA 1615
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1572 CGGAGTCGGTTTGGATCTTGTGTTGGCTTATAGGACTAAGGAGATTTACGCTAAGATTCA 1631
Query 1616 CGCTAGCAAGAAGTCCCAA-AAATCTGGTGGTAGCCTTAGTTAAGA-ATTATAGATCTAG 1673
||||||||||||||| || |||||||||||||||||||||||||| | | || ||||||
Sbjct 1632 CGCTAGCAAGAAGTCA-AAGAAATCTGGTGGTAGCCTTAGTTAAGACACTGTATATCTAG 1690
Query 1674 TTC 1676
|||
Sbjct 1691 TTC 1693
> AT4G34950.1 | Symbols: | Major facilitator superfamily protein
| chr4:16642316-16644818 REVERSE LENGTH=1991
Length=1991
Score = 588 bits (318), Expect = 6e-167
Identities = 630/781 (81%), Gaps = 20/781 (3%)
Strand=Plus/Plus
Query 42 TCTTCTTCTTCTGCAT-TGAAATGGCTTGGATTT-GTAACGGCTGTTTGGGTTCAAGCCA 99
|||||||| || || | |||||||||| || ||| || || || |||||||| ||| |||
Sbjct 87 TCTTCTTCCTCAGC-TCTGAAATGGCTAGG-TTTCGTTACTGCCGTTTGGGTCCAATCCA 144
Query 100 TCTCCGGCAACAACTACACTTTTTCAAACTACTCCGGTGCTCTTAAGT-CTCTCATGAAT 158
||||||||||||| ||||| || ||||| |||||||| || || || | || | |||||
Sbjct 145 TCTCCGGCAACAATTACACCTTCTCAAATTACTCCGGCGCACTCAAATCCT-TAATGAAC 203
Query 159 CTCAAC-CAGCTCGAGCTCAACAACCTCTCTGTCGCTAAAGACGTTGGAAAAGCCTTTGG 217
||| || ||| | || ||||||| ||||| |||||||||||||| |||||||| || ||
Sbjct 204 CTC-ACTCAGTTAGAACTCAACAGTCTCTCCGTCGCTAAAGACGTCGGAAAAGCATTCGG 262
Query 218 GATCCTCGCTGGCCTTGCCTCTGACCGTCTTCCTACTCCTGTCATCCTTCTTATTGGTTG 277
|||||||| || ||||| || ||||||||| | ||||| || ||||| || || ||||
Sbjct 263 AATCCTCGCCGGACTTGCTTCCGACCGTCTTTCAACTCCGGTGATCCTCCTCATCGGTTC 322
Query 278 TTTTGAAGGACTTCTCGGTTATGGTGTACAATGGCTTGTTGTTAGCCGCACCATCCAACC 337
||| ||||| ||||| ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 323 TTTCGAAGGTCTTCTTGGTTATGGTGTACAATGGCTTGTCGTTAGCCGCACGATTCAACC 382
Query 338 AATCCCTTATTGGCAGATGTGTATATTCCTCTGTATGGGAGGGAACAGCACAACGTGGAT 397
|| |||||||||||||||||| | || |||||||||||||| ||||| || ||||||||
Sbjct 383 TATACCTTATTGGCAGATGTGTGTGTTTCTCTGTATGGGAGGAAACAGTACGACGTGGAT 442
Query 398 GAACACGGCGGTTTTAGTGACTTGCATACGCAATTTCCGACGAAACCGTGGTCCTGTCTC 457
||||||||||||| | || ||||| ||| | || ||||| ||||| ||||||||||| ||
Sbjct 443 GAACACGGCGGTTCTGGTTACTTGTATAAGAAACTTCCGGCGAAATCGTGGTCCTGTTTC 502
Query 458 CGGGA-TCTTGAAAGGATATGTCGGCCTAAGCACAGCTATATTCACCGACCTATGCACTG 516
|||| |||| |||||||| || || |||| || || || ||||| || ||||| | ||
Sbjct 503 AGGGATTCTT-AAAGGATACGTTGGTTTAAGTACTGCGATTTTCACGGATCTATGTAATG 561
Query 517 CTCTGTTCTCAAAC-GATCCGGCGTCGTTT-TTGGTTTTGCTCGCAGTCATCCCTTTCGC 574
||||||| || | || || || |||||| || || | ||| | ||| | ||||| ||
Sbjct 562 CTCTGTTTTC-CTCTGACCCAGCTTCGTTTCTT-GTCCTCCTCTCCGTCGTGCCTTTTGC 619
Query 575 GGTCTGTCTCACGGCGGTTTTCTTCCTCCGTGAGATCCCACCTG-CTTCT-TCTGCCGCC 632
|| ||||||||||||||||||||||||||||| ||||| || | || || || ||||
Sbjct 620 CGTTTGTCTCACGGCGGTTTTCTTCCTCCGTGAAATCCCTCC-GTCTACTACCT-TCGCC 677
Query 633 GAGGAGAACGAAGAGACTCGCTACTTTACTATATTCAACATTGTGGCCGTCGTTGTCGCC 692
||||| ||||||||| || |||||| || | || ||||| || || || ||||| ||
Sbjct 678 GAGGATAACGAAGAGTCTAAATACTTTGCTGTGTTTAACATCGTTGCGGTTGTTGTTGCT 737
Query 693 GTGTATCTTCAGTCTTACGACATCATCGGAATCAAAACTGGAG-TGTTCTCTGTTGCTTT 751
||||| |||||||||||||||||||||||||||||||| |||| | ||||| | || ||
Sbjct 738 GTGTACCTTCAGTCTTACGACATCATCGGAATCAAAACAGGAGCT-TTCTCAATCGCATT 796
Query 752 CGCCTCCATACTTCTCTTCCTCTTGGCTTCTCCAATCGCCATTCCTTTCCACTCTTTCAT 811
||| |||||||||||| | ||||| || ||||| |||| | ||||||||| |||| ||
Sbjct 797 CGCTTCCATACTTCTCATACTCTTAGCCTCTCCTGTCGCTGTACCTTTCCACGCTTTTAT 856
Query 812 C 812
|
Sbjct 857 C 857
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82931300340
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5