BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931500
Length=860
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16720.1 | Symbols: MYB7, ATMYB7, ATY49 | myb domain protein... 1345 0.0
AT4G34990.1 | Symbols: AtMYB32, MYB32 | myb domain protein 32 |... 431 6e-120
> AT2G16720.1 | Symbols: MYB7, ATMYB7, ATY49 | myb domain protein
7 | chr2:7255529-7256580 REVERSE LENGTH=980
Length=980
Score = 1345 bits (728), Expect = 0.0
Identities = 807/846 (95%), Gaps = 2/846 (0%)
Strand=Plus/Plus
Query 4 CATCATCATCAGAAGAAGAAGAGAGCT-ATGGGAAGATCTCCTTGCTGCGAGAAAGAACA 62
||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 4 CATCATCATCATCAGAAGAAGAGAG-TCATGGGAAGATCTCCTTGCTGCGAGAAAGAACA 62
Query 63 CATGAACAAAGGTGCTTGGACTAAAGAAGAAGACGAGAGACTCGTCTCTTATATCAAGTC 122
||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 63 CATGAACAAAGGTGCTTGGACTAAAGAAGAAGATGAGAGACTAGTCTCTTACATCAAGTC 122
Query 123 TCACGGTGAAGGTTGTTGGCGATCTCTTCCTAGAGCCGCTGGTCTCCTCCGTTGCGGTAA 182
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 123 TCACGGTGAAGGTTGTTGGCGATCTCTTCCTAGAGCCGCTGGTCTCCTTCGCTGCGGTAA 182
Query 183 AAGCTGTCGTCTCCGGTGGATTAACTATCTCCGACCTGATCTCAAAAGAGGAAACTTTAC 242
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 AAGCTGCCGTCTTCGGTGGATTAACTATCTCCGACCTGATCTCAAAAGAGGAAACTTTAC 242
Query 243 ACATGATGAAGATGAACTTATCATCAAGCTTCATAGCCTCCTTGGCAACAAGTGGTCTTT 302
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 243 ACATGATGAAGATGAACTTATCATCAAGCTTCATAGCCTCCTAGGCAACAAGTGGTCTTT 302
Query 303 AATTGCGGCGAGATTACCTGGAAGAACAGATAATGAGATCAAGAATTACTGGAATACACA 362
|||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||
Sbjct 303 GATTGCGGCGAGATTACCTGGAAGAACAGATAACGAGATCAAGAACTACTGGAACACACA 362
Query 363 TATAAAGAGGAAGCTTTTGAGCAAAGGGATTGATCCAGCCACGCATAGAGCGATCAACGA 422
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 363 TATAAAGAGGAAGCTTTTGAGCAAAGGGATTGATCCAGCCACTCATAGAGGGATCAACGA 422
Query 423 GGCGAAAATTCCTGATTCGAAGAAAACAGAGGACCAAATTGTAAAAGATGTTTCTTTTGT 482
||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 423 GGCAAAAATTTCTGATTTGAAGAAAACAAAGGACCAAATTGTAAAAGATGTTTCTTTTGT 482
Query 483 GTCAAAGTTTGAGAAAACAGAAAAGTCTGGGGACAAGAAGCAAAATAAGCATATTAGAAA 542
| ||||||||||| ||||||| |||||||||||| |||||||||||||| ||||| ||||
Sbjct 483 GACAAAGTTTGAGGAAACAGACAAGTCTGGGGACCAGAAGCAAAATAAGTATATTCGAAA 542
Query 543 TGGGTTAGTGTGCAAAGAAGAGAGAGTTGTTGTTGAAGAAAATATATGTCCAGATTTGAA 602
||||||||| |||||||||||||||||||||||||||||||| ||| | |||||||||||
Sbjct 543 TGGGTTAGTTTGCAAAGAAGAGAGAGTTGTTGTTGAAGAAAAAATAGGCCCAGATTTGAA 602
Query 603 TCTTGAGCTTAGGATCAGTCCTCCATGGCAAAACCAGAGAGAAATATCTTCTTGCACTGC 662
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 603 TCTTGAGCTTAGGATCAGTCCACCATGGCAAAACCAGAGAGAAATATCTACTTGCACTGC 662
Query 663 GTCCCGTTTTTATATGGAAAACGGCATGGAGTGTAGTAGTGAAACTGTGAAATGTCAAAC 722
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 663 GTCCCGTTTTTACATGGAAAACGACATGGAGTGTAGTAGTGAAACTGTGAAATGTCAAAC 722
Query 723 AGAGGATAGTAGTAGCATTAGCTATTCTTCTATTGATATTAGTAGTAGCAACGTTGGTTA 782
|||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 723 AGAGAATAGTAGCAGCATTAGCTATTCTTCTATTGATATTAGTAGTAGTAACGTTGGTTA 782
Query 783 TGACTTCTTGGGTTTGAAGACAAGAATTTTGGATTTTCGAAGCTTGGAAATGAAATAAAT 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 783 TGACTTCTTGGGTTTGAAGACAAGAATTTTGGATTTTCGAAGCTTGGAAATGAAATAAAT 842
Query 843 GAATAG 848
||||||
Sbjct 843 GAATAG 848
> AT4G34990.1 | Symbols: AtMYB32, MYB32 | myb domain protein 32
| chr4:16661329-16662367 REVERSE LENGTH=944
Length=944
Score = 431 bits (233), Expect = 6e-120
Identities = 361/422 (86%), Gaps = 11/422 (3%)
Strand=Plus/Plus
Query 17 AGAAGAAGAGAGCTATGGGAAGATCTCCTTGCTGCGAGAAAGAACACATGAACAAAGGTG 76
||||||||| || |||||||| ||||||||||| |||||||| |||| |||||||| |
Sbjct 67 AGAAGAAGAAAG--ATGGGAAGGTCTCCTTGCTGTGAGAAAGACCACACAAACAAAGGAG 124
Query 77 CTTGGACTAAAGAAGAAGACGA-GAGACTCGTCTCTTATATC-AAGTCTCACGGTGAAGG 134
|||||||||| ||||||||||| || ||| ||||||| ||| ||| |||||||||||||
Sbjct 125 CTTGGACTAAGGAAGAAGACGATAAG-CTCATCTCTTACATCAAAG-CTCACGGTGAAGG 182
Query 135 TTGTTGGCGATCTCTTCCTAGAGCCGCTGGTCTCCTCCGTTGCGGTAAAAGCTGTCGTCT 194
||||||||| |||||||||||| |||| ||||| | |||||||| ||||||||||||||
Sbjct 183 TTGTTGGCGTTCTCTTCCTAGATCCGCCGGTCTTCAACGTTGCGGAAAAAGCTGTCGTCT 242
Query 195 CCGGTGGATTAACTATCTCCGACCTGATCTCAAAAGAGGAAACTTTACACAT-GATGAAG 253
||| ||||||||||||||||||||||||||||| || || ||||| || | | || ||||
Sbjct 243 CCGATGGATTAACTATCTCCGACCTGATCTCAAGAGGGGTAACTTCACCC-TCGAAGAAG 301
Query 254 ATGAACTTATCATCAAGCTTCATAGCCTCCTTGGCAACAAGTGGTCT-TTAATTGCGGCG 312
|||| || |||||||| || |||||||| || || |||||||||||| ||| ||||| ||
Sbjct 302 ATGATCTCATCATCAAACTACATAGCCTTCTCGGTAACAAGTGGTCTCTTA-TTGCGACG 360
Query 313 AGATTACCTGGAAGAACAGATAATGAGATCAAGAATTACTGGAATACACATATAAAGAGG 372
|||||||| |||||||||||||| ||||| |||||||||||||| |||||| | ||||||
Sbjct 361 AGATTACCAGGAAGAACAGATAACGAGATTAAGAATTACTGGAACACACATGTTAAGAGG 420
Query 373 AAGCTTTTGAGCAAAGGGATTGATCCAGCCACGCATAGAGCGATCAACGAGGCGAAAA-T 431
||||| || || |||||||||||||| || || ||| || | ||||||||| | |||| |
Sbjct 421 AAGCTATTAAGAAAAGGGATTGATCCGGCGACTCATCGACCTATCAACGAGACCAAAACT 480
Query 432 TC 433
||
Sbjct 481 TC 482
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 41945512745
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5