BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931532
Length=2716
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16950.1 | Symbols: TRN1, ATTRN1 | transportin 1 | chr2:7353... 4453 0.0
AT2G16960.1 | Symbols: | ARM repeat superfamily protein | chr2... 601 1e-170
> AT2G16950.1 | Symbols: TRN1, ATTRN1 | transportin 1 | chr2:7353847-7361202
FORWARD LENGTH=3345
Length=3345
Score = 4453 bits (2411), Expect = 0.0
Identities = 2625/2727 (96%), Gaps = 20/2727 (1%)
Strand=Plus/Plus
Query 1 ACCTTTTTGCCACAACAATCATGGCGGCGACGGCGGTGGTCTGGCAACCCCGAGACGATG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 ACCTTTTTGCCACAACAATCATGGCGGCGACGGCGGTGGTCTGGCAACCCCGAGACGATG 132
Query 61 GTCTCGCTGAGATCTGTTCTCTTCTCGAACAACAGATTTCTCCTTCCTCCGTCGTTGACA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 GTCTCGCTGAGATCTGTTCTCTTCTCGAACAACAGATTTCTCCTTCCTCCGTCGTTGACA 192
Query 121 AGTCTCAGATTTGGAAGCAGCTTCAACACTTCTCTCAGTTCCCTGATTTCAACAACTATC 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 193 AGTCTCAGATTTGGAAGCAGCTTCAACACTTCTCTCAGTTTCCTGATTTCAACAACTATC 252
Query 181 TCGTCTTCATCCTCGTTCGCGCTGAGGGAAAGTCCGTAGAGGTTCGTCAAGCTGCTGGAT 240
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 253 TCGTCTTCATCCTCGTTCGCGCTGAGGGAAAGTCTGTTGAGGTTCGTCAAGCTGCTGGAT 312
Query 241 TGCTTCTGAAAAATAATTTGAGGGGTGCTTATCCATCCATGGCTCAAGAAAACCAAAAAT 300
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 313 TGCTTTTGAAAAATAATTTGAGGGGTGCTTATCCATCCATGACTCAAGAAAACCAAAAAT 372
Query 301 ATATCAAGTCGGAGTTGCTGCCTTGTCTTGGAGCAGCGGACAGGAATATACGGACTACAG 360
|||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 373 ATATCAAGTCAGAGTTACTGCCTTGTCTGGGAGCAGCGGACAGGAATATACGGACTACAG 432
Query 361 TTGGAACTATTATCAGTGTTATTGTTAATATAGAGGGAGTTTCTGGATGGCATGAGCTTT 420
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 433 TTGGAACTATCATCAGTGTTATTGTTAATATTGAGGGAGTTTCTGGATGGCATGAGCTTT 492
Query 421 TGCCAGCTCTTGTTACTTGTTTAGACAGTAATGACCTCAATCACATGGATGGTGCTATGG 480
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 493 TGCCAGCTCTTGTTACTTGTTTAGACAGTAATGACCTTAATCACATGGATGGTGCTATGG 552
Query 481 ATGCATTGTCAAAGATTTGTGAGGATATCCCGCATGTCTTGGATACAGAAGTGCCTGGCT 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 553 ATGCATTGTCAAAGATTTGTGAGGATATTCCGCATGTCTTGGATACAGAAGTGCCTGGCT 612
Query 541 TAGCAGAACGCCCTATTAACATTTTCCTGCCTAGGCTATTTCAGTTTTTTCAGTCACCCC 600
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 613 TAGCAGAACGCCCTATCAACATTTTCCTGCCTAGGCTATTACAGTTTTTTCAGTCACCCC 672
Query 601 ATGCTTCACTGAGGAAGCTTGCCCTGGGTTCTGTGAACCAATATATCATAATCATGCCTG 660
|||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct 673 ATGCTTCACTGAGGAAGCTTGCCCTGGGTTCTGTGAACCAGTATATCATTATAATGCCTG 732
Query 661 C----------C--GCTTTGTACAATTCCA-TGGATAAGTACCTTCAGGGGTTGTTTGTC 707
| | ||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 733 CTGTAATTTGGCAGGCTTTGTACAATT-CATTGGATAAGTACCTTCAGGGGTTGTTTGTC 791
Query 708 CTCGCAAATGATCCTGTAGCAGAAGTCAGAAAATTGGTCTGCGCAGCATTTGTGCATCTC 767
|| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 792 CTAGCCAATGATCCTGTACCAGAAGTCAGAAAATTGGTCTGCGCAGCATTTGTGCATCTC 851
Query 768 ACAGAAGTACTCCCCTCATCCATAGAGCCGTATCTCAGGAATGTCATGGAATACATGTTA 827
|| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 852 ACGGAAGTACTCCCCTCATCTATAGAGCCGCATCTCAGGAATGTCATGGAATACATGTTA 911
Query 828 CAAGTTAACA-ATGACCCTGACGAAGAAGTGT-GTCTTGAAGCATGTGAATTTTGGTCTG 885
|||||||| | | ||||||||||||||||||| | || ||||||||||||||||||||||
Sbjct 912 CAAGTTAATAGA-GACCCTGACGAAGAAGTGTCG-CTCGAAGCATGTGAATTTTGGTCTG 969
Query 886 CATACTGTGACGCCCAGCTGCCTCCAGAGAACCTGAAAGAGTTTCTGCCAGGCCTAATTC 945
|||||||||| || ||||| |||||||||||| ||||||||||||||||| |||||||||
Sbjct 970 CATACTGTGATGCTCAGCTACCTCCAGAGAACTTGAAAGAGTTTCTGCCACGCCTAATTC 1029
Query 946 CAGTGTTGCTCGCAAACATGGCTTATGCAGATGACGACGAGTCACTTTTGGATGCAGAGG 1005
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030 CAGTGTTGCTCGAAAACATGGCTTATGCAGATGACGACGAGTCACTTTTGGATGCAGAGG 1089
Query 1006 AAGATGAGTCGCAACCAGACAGAGATCAGGATTTGAAACCTCGTTTTCATACATCAAGAC 1065
|||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1090 AAGATGAGTCTCAACCAGACAGAGATCAGGATTTAAAACCTCGTTTTCACACATCAAGAC 1149
Query 1066 TTCATGGATCAGAAGATTTtgatgatgatgatgatgaCTCGTTTAACGTGTGGAATTTAA 1125
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1150 TTCATGGATCAGAAGATTTTGATGATGATGATGATGACTCGTTTAATGTGTGGAATTTAA 1209
Query 1126 GAAAGTGTAGTGCAGCAGCTATTGACATTCTCTCTAATGTATTTGGAGATGAAATCCTTC 1185
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct 1210 GAAAGTGTAGTGCAGCAGCTATTGACGTTCTCTCTAATGTTTTTGGAGATGAAATCCTTC 1269
Query 1186 CAGCAATCATGCCCCTAATTCAGACAAATTTATCAGCCTCTGGTGATGACGCCTGGAAAC 1245
||||| |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||
Sbjct 1270 CAGCACTCATGCCCCTAATTCAGAAAAATTTATCAGCTTCTGGTGATGAGGCCTGGAAAC 1329
Query 1246 AAAGGGAAGCTGCTGTTTTGGCTCTTGGGGCTATTTCTGAAGGCTGCATGAATGGTCTTT 1305
||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||
Sbjct 1330 AAAGGGAAGCTGCTGTTTTGGCTCTCGGCGCTATTGCTGAAGGCTGCATGAATGGTCTTT 1389
Query 1306 ACCCTCATTTGTCTGAGATCGTGGCATTTCTTCTTCCTCTTTTAGATGATAAATTCCCGC 1365
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1390 ACCCTCACTTGTCTGAGATCGTGGCATTTCTTCTTCCTCTTTTAGATGATAAATTCCCGC 1449
Query 1366 TGATACGAAGCATATCTTGCTGGACGCTTTCTCGATTTGGCAAGTATCTTATCCAGGAAA 1425
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1450 TCATACGGAGCATATCTTGCTGGACGCTTTCTCGATTTGGCAAGTATCTTATCCAGGAAA 1509
Query 1426 GTGGCAATCCGAAGGGTTATGAACAATTTGAGAGAGTTCTTATGGGTCTTCTCCGCAGAC 1485
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1510 GTGGCAATCCGAAGGGTTATGAACAATTTGAGAAAGTTCTTATGGGTCTTCTCCGCAGAC 1569
Query 1486 TCTTGGATACGAACAAGCGGGTCCAGGAGGCTGCCTGTTCAGCTTTTGCAACTGTTGAAG 1545
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1570 TCTTGGATACGAACAAGCGGGTTCAGGAGGCTGCCTGTTCAGCTTTTGCAACTGTTGAAG 1629
Query 1546 AGGATGCTGCCGAAGAGTTAGTGCCACACCTGGGGGTAATACTGCAGCATCTGATGTGCG 1605
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1630 AGGATGCTGCTGAAGAGTTAGTGCCACACCTGGGTGTAATACTGCAGCATCTGATGTGCG 1689
Query 1606 CTTTTGGAAAGTATCAGAGACGGAACTTAAGAATTGTTTATGATGCTATTGGAACACTGG 1665
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1690 CTTTTGGAAAGTATCAGAGACGGAATTTAAGAATTGTTTATGATGCTATTGGAACACTGG 1749
Query 1666 CAGATTCAGTTAGAGGAGAGTTGAACAAGCCTGCTTATCTTGATATTCTGATGCCCCCAC 1725
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1750 CAGATTCAGTTAGAGAAGAGTTGAACAAGCCTGCTTATCTTGAGATTCTGATGCCTCCAC 1809
Query 1726 TGGTTGCAAAGTGGCAACAGCTTTCCAATTCAGATAAAGATCTATTTCCACTGCTAGAGT 1785
||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||
Sbjct 1810 TGGTTGCAAAGTGGCAACAACTTTCAAATTCAGATAAAGATCTATTTCCATTGCTAGAGT 1869
Query 1786 GCTTCACATCCATTTCTCAGGCTTTAGGTGTAGGATTTGCTCCATTTGCTCAGCCTGTTT 1845
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1870 GCTTTACATCCATTTCTCAGGCTTTAGGTGTAGGATTCGCTCCATTTGCTCAGCCTGTTT 1929
Query 1846 TCCAGAGATGCATGGATATCATCCAATTGCAGCAGCTGGCTAAGGTTGATCCTTCTTCTG 1905
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 1930 TCCAGAGATGCATGGATATCATCCAATTGCAGCAGCTGGCTAAGGTTAATCCTGCTTCTG 1989
Query 1906 CTGGGGCTCAGTATGATAGAGAATTCATTGTTTGTTCTCTTGATTTGCTTTCTGGACTTG 1965
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1990 CTGGGGCTCAGTATGACAGAGAATTTATTGTTTGTTCTCTTGATTTGCTTTCTGGACTTG 2049
Query 1966 CTGAAGGGCTTGGCAGTGGGATAGAGTCTCTGGTTTC-ACAAAGTAACCTAAGGGATCTG 2024
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 2050 CTGAAGGGCTTGGCAGTGGGATAGAGTCTCTGG-TTCAACAAAGTAACCTAAGGGATCTG 2108
Query 2025 CTTCTCAATTGTTGCATTGATGAAGCTCCTGATGTCAGACAAAGTGCTTTTGCCCTAATG 2084
||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||
Sbjct 2109 CTTCTCAATTGTTGCATTGATGAAGCTGCTGATGTCAGACAAAGTGCTTTTGCCTTGATG 2168
Query 2085 GGTGATCTCGCAAGAGTATTCCCGGTCTATCTACAACCCCGCCTGCTTGATTTCCTTGAA 2144
|||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2169 GGTGATCTAGCAAGAGTTTTCCCAGTCTATCTACAACCCCGCCTGCTTGATTTCCTTGAA 2228
Query 2145 ATTGCAAGCCAGCAACTGAGTGCAAACCTCAATAGAGAAAACCTTTCTGTAGCAAATAAT 2204
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 2229 ATTGCAAGCCAGCAACTGAGTGCAAACCTTAATAGAGAAAACCTTTCTGTCGCAAATAAT 2288
Query 2205 GCTTGTTGGGCCATTGGAGAATTAGCGGTCAAGGTTCGTCAAGAAGTCTCACCAATTGTG 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2289 GCTTGTTGGGCCATTGGAGAATTAGCGGTCAAGGTTCGTCAAGAAGTCTCACCAATTGTG 2348
Query 2265 GCCAAAGTTGTCTCTTCCCTAGGCCTGATTCTTCAACATGGAGAGGGTGTCAATAAGGCA 2324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2349 GCCAAAGTTGTCTCTTCCCTAGGCCTGATTCTTCAACATGGAGAGGGTGTCAATAAGGCA 2408
Query 2325 CTAGTTGAGAACAGTGCAATTACCCTTGGGAGACTAGCATGGATACGTCCAGACCTCGTT 2384
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 2409 CTAGTTGAGAACAGTGCAATAACCCTTGGGAGACTAGCATGGATTCGTCCAGACCTCGTT 2468
Query 2385 GCACCACACATGGAGCACTTTATGAAGCCATGGTGCATGGCATTGTCAATGGTACGTGAT 2444
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2469 GCACCACACATGGACCACTTTATGAAGCCATGGTGCATGGCATTGTCAATGGTACGTGAT 2528
Query 2445 GACATTGAGAAAGAAGATGCATTTAGAGGATTATGTGCAGTGGTTAAAGTGAATCCATCA 2504
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2529 GACATTGAGAAAGAAGATGCGTTTAGAGGATTATGTGCAGTGGTTAAAGTGAATCCATCA 2588
Query 2505 GGAGGTGTCAGCTCACTTGTTTTCATATGCCAAGCCATTGCGAGTTGGCATGAAATAAGA 2564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2589 GGAGGTGTCAGCTCACTTGTTTTCATATGCCAAGCCATTGCGAGTTGGCATGAAATAAGA 2648
Query 2565 AGCGAGGACGTCCAGAACGAAGTCTCCCAAGTACTGAACGGTTATAAACACATGCTGGGA 2624
|||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2649 AGCGAGGATGTCCAGACCGAAGTCTCCCAAGTACTGAACGGTTATAAACATATGCTGGGA 2708
Query 2625 AACTCATGGGCGGAATGTTTGTCTGCTTTGGATCCTCCAGTAAAGGAAAGGCTTGCGAGA 2684
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 2709 AACTCATGGGCGGAATGTTTATCTGCTTTGGATCCTCCTGTAAAGGAAAGGCTTGCGAGA 2768
Query 2685 TATCAAGTGTAACATTGATCGTACACC 2711
|||||||||||||||||||| ||||||
Sbjct 2769 TATCAAGTGTAACATTGATCATACACC 2795
> AT2G16960.1 | Symbols: | ARM repeat superfamily protein | chr2:7364683-7368963
FORWARD LENGTH=1644
Length=1644
Score = 601 bits (325), Expect = 1e-170
Identities = 778/990 (79%), Gaps = 57/990 (6%)
Strand=Plus/Plus
Query 1115 GTGGAATTTAAGA-AAGTGTAGTGCAGCAGCTATTGACATTCTCTCTAATGTATTTGGAG 1173
||||||||||||| | || |||||| | ||||| |||||| |||||||||||||||
Sbjct 45 GTGGAATTTAAGAGCA-TGCAGTGCAAAATTTATTGGTATTCTCGCTAATGTATTTGGAG 103
Query 1174 ATGAAATCCTTCCAGCAATCATGCCCCTAATTCAGACAAATTTATC-AGCCTCTGGTGAT 1232
||||||| |||| | || ||||||| || ||| || |||| |||| | || | ||||
Sbjct 104 ATGAAATTCTTCTAACACTCATGCCTCTTATTGAGGCAAAACTATCAAAATTC-GATGAT 162
Query 1233 GACG-CCTGGAAACAAAGGGAAGCTGCTGT-TTTGGCTCTTGGGGCTATTTCTGAAGGCT 1290
|| | | |||||| | ||||||||||| || ||| ||| |||| || ||| ||||||| |
Sbjct 163 GA-GACTTGGAAAGAGAGGGAAGCTGCAGTGTTT-GCTTTTGGAGCCATTGCTGAAGGAT 220
Query 1291 GC-ATGAATGGTCTTTACCCTCATTTGTCTGAGATCGTGGCATTTCTTCTTCCTCTTTTA 1349
|| || | | | |||||||||| | | | ||| || ||| | |||| || |||||||
Sbjct 221 GCAAT-AGTTTTTTTTACCCTCA--T-T-T--GATTGTAGCAATCCTTCGTCGTCTTTTA 273
Query 1350 GATGATAAATTC-CCGCT-GATACGAAGCATATCTTGCTGGACGCTTTCTCGATTTGGCA 1407
|||||| || || || || | ||||||| ||| | || ||||| |||| || ||||||||
Sbjct 274 GATGATCAA-TCTCCTCTCG-TACGAAGGATAACGTGTTGGACACTTTATCAATTTGGCA 331
Query 1408 -AGTATCTTATCCAGGAAAGTGGCAATCCGAAGGGTTA-TGAACAATTTGA-GAGAGTTC 1464
| ||| || | |||||||| ||| | | | || | ||| ||| | | |||||
Sbjct 332 CA-TATGTTTTTGAGGAAAGT---AATTTGGA-GAATAGTAAACTCTTT-ACAAAAGTTC 385
Query 1465 TT-ATGGGTCTTC-TCCGCAGACTCTTGGATACGAACAAGC-GGGTCCAGGAGGCTGCCT 1521
|| || ||| ||| | || ||| |||||| ||||| | | |||||||||| ||||| |
Sbjct 386 TTCAT-GGTTTTCGT-TTCAAACTTTTGGATTCGAAC-ATCTGGGTCCAGGAAGCTGCAT 442
Query 1522 GTTCAGCTTTTG-CAACTGTTGAAGAGGATGCTGCCGA-AGAGTTAGTGCCACACCTGGG 1579
||| || |||| ||||| ||||||||||||||| || | | ||||| ||||||||||
Sbjct 443 GTTTGGC-TTTGACAACTTTTGAAGAGGATGCTGGTGACA-AATTAGTACCACACCTGGA 500
Query 1580 GGTAATACTGCAGCATCTGATGTGCGCTTTTGGAAAGTATCAG-AGACGGAACTTAAGAA 1638
|||| | || || || ||| |||||||||||||||||||| ||| ||||||||| ||
Sbjct 501 AAAAATATTACAACAGCTAATGCGCGCTTTTGGAAAGTATCAGAAGA-GGAACTTAA-AA 558
Query 1639 -TTGTT-TATGATGCTATTGGAACACTGGCAGATTCAGTTAGAGGA-GAGT-TGAACAAG 1694
|| || | |||||||||| || |||| |||||||||||| | | | | | ||||||||
Sbjct 559 GTTCTTCT-TGATGCTATTAGAGCACTAGCAGATTCAGTT-G-GAATCAATCTGAACAAG 615
Query 1695 CCTGCTTATCTTGATATTCTGATGCCCCCACTGGTTGCAAAG-TGGCAACAGCTTTCCAA 1753
| ||||||| || | ||| |||| |||||||||||| ||| | ||| |||| |||||||
Sbjct 616 CGTGCTTATATTAAGATTTTGATTCCCCCACTGGTTTCAACGTTGG-AACAAATTTCCAA 674
Query 1754 TTCAGATAAAGATCTATTTCCACTGCTAG-AGTGCTTCACATCCATTTCTCAGGCTTTAG 1812
||||||||||||| || ||||| |||| | |||||||||||||||||||| |||||||||
Sbjct 675 TTCAGATAAAGATGTAATTCCATTGCT-GAAGTGCTTCACATCCATTTCTAAGGCTTTAG 733
Query 1813 GTGTAGGATTTGCTCCATTTGCTCAGCCTGTTTTCCAGAGATGCATGGATATCATCCAAT 1872
|||||||| ||||||||| || | ||||||| |||| |||||||||||| | |||
Sbjct 734 AAGTAGGATTCGCTCCATTTTCTTGGTATGTTTTCGAGAGGTGCATGGATATCCTTCAAC 793
Query 1873 TGCAGCAGCTGGCTAAGGTTGATCCTTCTTCTGCTGGGGCTCAGTATGATAGAGAAT-TC 1931
| || ||||| ||||||||||||| | || ||| |||| ||| || || | ||| ||
Sbjct 794 TACAACAGCTAGCTAAGGTTGATCATGATTTTGCCGGGGTTCAATACGA-CCAAAATATC 852
Query 1932 ATTGTTTGTTCTCTTG-ATTTGCTTTCTGGACTTGCTGAAGGGCTTGGCAGTGGGATAGA 1990
| ||||||||||||| |||| ||||||||||| || ||||||||| ||||||||||||
Sbjct 853 GTCGTTTGTTCTCTTGAATTT-TTTTCTGGACTTTCTAAAGGGCTTGTCAGTGGGATAGA 911
Query 1991 GTCTCTGGTTTCACAAAGTAACCTAAGGGATCTGCTTCTCAATTGTTGCATTGATGAAGC 2050
||||||||||||||||||||| ||||||||| ||||||| || |||| ||| |||||| |
Sbjct 912 GTCTCTGGTTTCACAAAGTAATCTAAGGGATATGCTTCTTAAGTGTTTCATGGATGAAAC 971
Query 2051 TCCTGATGTCAGACAAAGTGCTTTTGCCCT 2080
||| ||||| ||| ||||||||||||||||
Sbjct 972 TCCAGATGTTAGAGAAAGTGCTTTTGCCCT 1001
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134898909727
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5