BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931549 Length=833 Score E Sequences producing significant alignments: (Bits) Value AT2G17080.1 | Symbols: | Arabidopsis protein of unknown functi... 887 0.0 AT2G17070.1 | Symbols: | Arabidopsis protein of unknown functi... 876 0.0 AT2G17064.1 | Symbols: | Pseudogene of AT2G17080 | chr2:742862... 693 0.0 AT4G35210.1 | Symbols: | Arabidopsis protein of unknown functi... 486 1e-136 > AT2G17080.1 | Symbols: | Arabidopsis protein of unknown function (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=792 Length=792 Score = 887 bits (480), Expect = 0.0 Identities = 696/800 (87%), Gaps = 16/800 (2%) Strand=Plus/Plus Query 21 ATGGCAGTCTCTTTCCACGTTCGCTCTAACAGTTTCCCTTCTAGACT-TCCCCCACAAGC 79 ||||||||||| ||||||||||| |||||||| ||||| || ||| | || ||||||||| Sbjct 1 ATGGCAGTCTCCTTCCACGTTCGATCTAACAGCTTCCCCTCAAGA-TCTCACCCACAAGC 59 Query 80 CGCTCATGTCGATGAGCAGTTGGCTCGATTAAGATCTTCTGAGGATGCCTCGA-CATCTT 138 |||||||| |||||||||||||| || || |||||||| ||| | ||||| | |||||| Sbjct 60 TGCTCATGTGGATGAGCAGTTGGCCCGTTTGAGATCTTCCGAGCAAGCCTC-ATCATCTT 118 Query 139 CTAGCTCTTATATCTG-CAATAGACTTGAAAACCTTCAAGAGCTACATGAGTCTCTTGAC 197 | ||||||| |||||| ||| || ||||| ||||||||||| |||||||||||||||||| Sbjct 119 CCAGCTCTTCTATCTGCCAA-AGGCTTGACAACCTTCAAGAACTACATGAGTCTCTTGAC 177 Query 198 AAGTTTATTC-GCCTACCTGTAACACAACAAGCTCTAGGTCAAGAGCAGAACAAGAAAGC 256 ||| ||| || ||| |||||| |||||||| ||||| ||||||||| ||||||||||| Sbjct 178 AAGCTTA-TCAGCCGACCTGTCACACAACAGGCTCTTTCTCAAGAGCATAACAAGAAAGC 236 Query 257 CGTCGAGCAACTTCTTGATGGATCTTTAAGGATCTTGGATTTGTGCAACATTTCCAAGGA 316 ||| || || |||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 237 CGTTGAACAGCTTCTTGATGGATCCCTCAGGATCTTGGATTTGTGCAACATTTCCAAGGA 296 Query 317 TGCTTTGTCACAGATGAAAGAGGGTCTCATGGAGATCCAATCGATTCTACGAAGAAAGCG 376 |||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 297 TGCTTTGTCAGAGATGAAAGAGGGTCTCATGGAGATCCAATCAATTCTAAGAAGAAAGCG 356 Query 377 CGGTGACCTACCGGGAGAGGTCAAGAAATACTTAGCCTCAAGAAGATCCCTAAAGAAGTC 436 ||||| ||| ||| ||| ||||||||||||||| ||||||||| ||| || |||||||| Sbjct 357 TGGTGATCTATCGGAAGAAGTCAAGAAATACTTAACCTCAAGAAAATCTCTTAAGAAGTC 416 Query 437 ATTCCA-AAAGGTCCTCAAGAGTTTGAAGGTCAAACAAGACC-AAGAGTGCGGCGACAA- 493 |||||| |||| | | ||| ||||||||| | ||||| | |||| | ||| | Sbjct 417 ATTCCAGAAAG-TACAAAAGTCTTTGAAGGTTACACAAG-CTGAAGACAACAACGATGAC 474 Query 494 ATCCTTGGCAGTGTTTGGAGAAGCAGAAGATGTGACAATTGCTCTGTTTGATTCTCTGTT 553 | | ||||| || |||||||||||||||| | | ||| || |||||||||||||||| | Sbjct 475 A-CTTTGGCTGTCTTTGGAGAAGCAGAAGCTATTACACTTTCTCTGTTTGATTCTCTCCT 533 Query 554 TTGCTTCATGTCTGGATCAAAGACTTGTAGCAAATGGTCTGTCGTCTCAAAGCTAATGAA 613 | ||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 534 TAGCTACATGTCTGGATCAAAGACTTGTAGTAAATGGTCAGTCGTCTCAAAGCTAATGAA 593 Query 614 CAAGAAGAAAGTTACATGTGAAGCTCAAGGAAACGAATTCAC-AAGGGTTGATTCCGAAT 672 |||||||||||||||||||||||| |||| |||||||||||| |||| |||||||||||| Sbjct 594 CAAGAAGAAAGTTACATGTGAAGCGCAAGAAAACGAATTCACGAAGG-TTGATTCCGAAT 652 Query 673 TCCAATCCGAAAAGACATTGAAGATGGAAGATGTTCAGATCTTAGATTCATGCATTCAAG 732 | |||||||||||||| ||||||||||| |||||||||| | |||| ||||||||||||| Sbjct 653 TTCAATCCGAAAAGACCTTGAAGATGGATGATGTTCAGAACCTAGAGTCATGCATTCAAG 712 Query 733 ATCTTGAAGATGGACTTGAATCTCTCTCTAAGTCTTTGATCAAATACAGAGTCTCAATTC 792 |||||||||||||||||||||| || || ||||| ||||| ||||||||||||||| ||| Sbjct 713 ATCTTGAAGATGGACTTGAATCACTTTCAAAGTCATTGATTAAATACAGAGTCTCATTTC 772 Query 793 TTAACATCTTAGGCCACTAA 812 |||||||||||||||||||| Sbjct 773 TTAACATCTTAGGCCACTAA 792 > AT2G17070.1 | Symbols: | Arabidopsis protein of unknown function (DUF241) | chr2:7430863-7431654 REVERSE LENGTH=792 Length=792 Score = 876 bits (474), Expect = 0.0 Identities = 699/805 (87%), Gaps = 26/805 (3%) Strand=Plus/Plus Query 21 ATGGCAGTCTCTTTCCACGTTCGCTCTAACAGTTTCCCTTCTAGACTTCCCCCACAAGCC 80 ||||| ||||| ||||||||||| ||| |||||| ||| || | || || |||||||||| Sbjct 1 ATGGCTGTCTCCTTCCACGTTCGATCTCACAGTTACCCCTCGATACCTCACCCACAAGCC 60 Query 81 GCTCATGTCGATGAGCAGTTGGCTC-GATTAAGATCTTCTGAGGATGCCTCGACATCTTC 139 |||||||| |||||||||||||| | ||||||||||||||||||| |||| |||||||| Sbjct 61 GCTCATGTTGATGAGCAGTTGGC-CAGATTAAGATCTTCTGAGGAAACCTCAACATCTTC 119 Query 140 TAGCTCTTATATCTG-CAATAGACTTGAAAACCTTCAAGAGCTACATGAGTCTCTTGACA 198 ||||||| |||||| ||| |||||||| ||||||||||| ||||||||||||||||||| Sbjct 120 AAGCTCTTCTATCTGTCAA-AGACTTGACAACCTTCAAGAACTACATGAGTCTCTTGACA 178 Query 199 AGTTTATTCGCCTACCTGTAACACAACAAGCTCTAGGTCAAGAGCAGAACAAGAAAGCCG 258 || ||||||||||||| || |||||||| ||||| ||||||||| |||||||||||| || Sbjct 179 AGCTTATTCGCCTACCCGTTACACAACAGGCTCTCGGTCAAGAGAAGAACAAGAAAGACG 238 Query 259 TCGAGCAACTTCTTGATGGATCT-TTAAGGATCTTGGATTTGTGCAACATTTCCAAGGAT 317 | ||||||||||||||||||||| | || ||| |||||| |||||||||| ||||||||| Sbjct 239 TTGAGCAACTTCTTGATGGATCTCTCAA-GATATTGGATGTGTGCAACATATCCAAGGAT 297 Query 318 GCTTTGTCACAGATGAAAGAGGGTCTCATGGAGATCCAATCGATTCTACGAAGAAAGCGC 377 |||||||| ||||||||||| |||||||||||||||||||| |||||| ||||||||||| Sbjct 298 GCTTTGTCGCAGATGAAAGAAGGTCTCATGGAGATCCAATCTATTCTAAGAAGAAAGCGC 357 Query 378 GGTGACCTACCGGGAGAGGTCAAGAAATACTTAGCCTCAAG-AAGATCCCTAAAGAAGTC 436 || || ||| | |||||||| |||||||||||||||||||| ||| ||| | |||||| | Sbjct 358 GGAGATCTATCAGGAGAGGTGAAGAAATACTTAGCCTCAAGAAAG-TCCTTCAAGAAGAC 416 Query 437 ATTCCA-AAAGGTCCTCAAGAGT--TTGAAGGTC-AAACAAGAC-CAAGAGTGC-GGCGA 490 |||||| ||| || ||| ||| | |||| | ||||| | |||| | | || Sbjct 417 ATTCCAGAAA-GT--ACAAAAGTCCCTCAAGG-CTGCACAAG-CAGAAGACAACAAG-GA 470 Query 491 CAAATCCTTGGCAGTGTTTGGAGAAGCAGAAGATGTGACAATTGCTCTGTTTGATTCTCT 550 |||||| ||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||| Sbjct 471 CAAATCTTTGGCTGTGTTTGGAGAAGCAGAAGCTGTTACAATTGCTATGTTTGATTCTCT 530 Query 551 GTTTTGCTTCATGTCTGGATCAAAGACTTGTAGCAAATGGTCTGTCGTCTCAAAGCTAAT 610 ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 531 CTTTAGCTACATGTCTGGATCAAAGACTTGTAGCAAATGGTCAGTCGTCTCAAAGCTAAT 590 Query 611 GAACAAGAAGAAAGTTACATGTGAAGCTCAAGGAAACGAATTCAC-AAGGGTTGATTCCG 669 ||||||||||||| ||||||||||||| |||| |||||||||||| |||| |||| |||| Sbjct 591 GAACAAGAAGAAAATTACATGTGAAGCACAAGAAAACGAATTCACCAAGG-TTGACTCCG 649 Query 670 AATTCCAATCCGAAAAGACATTGAAGATGGAAGATGTTCAGATCTTAGATTCATGCATTC 729 | ||||||||||| ||||| ||||| ||||| || ||||||||| |||| |||||||||| Sbjct 650 AGTTCCAATCCGAGAAGACTTTGAAAATGGAGGACGTTCAGATCCTAGAGTCATGCATTC 709 Query 730 AAGATCTT-GAAGATGGACTTGAATC-TCTCTCTAAGTCTTTGATCAAATACAGAGTCTC 787 ||||| || ||||||||||| ||||| | | |||||||||||||||||||||||||| || Sbjct 710 AAGAT-TTCGAAGATGGACTAGAATCAT-TATCTAAGTCTTTGATCAAATACAGAGTTTC 767 Query 788 AATTCTTAACATCTTAGGCCACTAA 812 ||||||||||| ||| ||||| ||| Sbjct 768 AATTCTTAACAGCTTTGGCCATTAA 792 > AT2G17064.1 | Symbols: | Pseudogene of AT2G17080 | chr2:7428623-7429916 FORWARD LENGTH=782 Length=782 Score = 693 bits (375), Expect = 0.0 Identities = 664/796 (83%), Gaps = 49/796 (6%) Strand=Plus/Plus Query 38 CGTTCGCTCTAACAGTTTCCCTTCTAGACTTCCCCCACAAGCC-GCTCATGTCGATGAGC 96 |||||| ||||| |||||||| ||||||| || ||||||| || ||||||||||||||| Sbjct 15 CGTTCGTTCTAAAAGTTTCCCATCTAGACCTCACCCACAA-CCTTCTCATGTCGATGAGC 73 Query 97 AGTTGGCTCGATTAAGATCTTCTGAGGATGCCTCGACATCTTCTAGC--TCTTATATCTG 154 ||||| |||| || |||||||||||||| ||||| |||||||| ||| |||||| | | Sbjct 74 AGTTGTCTCGTTTGAGATCTTCTGAGGAAGCCTCAACATCTTCAAGCTTTCTTATCT-TC 132 Query 155 CAATAGACTTGAAAACCTTCAAGAGCTACATG-AGTCTCTTGACAAGTTTATTCGCCTAC 213 ||| |||||||| |||||||| || ||||||| || ||||||||||| ||||| ||||| Sbjct 133 CAA-AGACTTGACAACCTTCAGGATCTACATGAAG-CTCTTGACAAGCTTATTTACCTAC 190 Query 214 -CTGTAACACAACAAGCTCTAGGTCAAGAGC--AGAACAAGAAAGCCGTCGAGCAACTTC 270 || | |||||||| ||||||| |||||| | | |||| |||||| || || ||||||| Sbjct 191 TCT-TCACACAACATGCTCTAGCTCAAGAACATATAACAGGAAAGCTGTTGAACAACTTC 249 Query 271 TTGATGGATCT-TTAAGGATCTTGGATTTGTGCAACATTTCCAAGGATGCTTTGTCACAG 329 ||||||||||| | || ||||||||||||||||||||||||||||||||| || || ||| Sbjct 250 TTGATGGATCTATGAA-GATCTTGGATTTGTGCAACATTTCCAAGGATGCGTTCTCGCAG 308 Query 330 ATGAAAGAGGGTCTCATGGA-GATCCAATCGATTCTACGAAGAAAGCGCGGTGACCTACC 388 |||||||||||||||||||| | | ||||| |||||| |||||||||| || || || | Sbjct 309 ATGAAAGAGGGTCTCATGGAAG-TACAATCCATTCTAAGAAGAAAGCGTGGAGATATATC 367 Query 389 G-G-GA-GAGGTCAAGAAATACTTAGCC-TCAAGAAGATCCCTAAAGAAGTCATTCCAAA 444 | || ||||||||||||||||||||| | |||||||||||| |||||||||||||||| Sbjct 368 TTGAGACGAGGTCAAGAAATACTTAGCCAT-AAGAAGATCCCTCAAGAAGTCATTCCAAA 426 Query 445 AGGTCCTCAAGAGTTTGAAGGTCAAACAAGACCAAGAGTGCGGCGACAAATCCTTGGC-A 503 | ||| | | ||||||||| |||||||||||||| ||||| || | |||| || || | Sbjct 427 AAGTCGTTAGGAGTTTGAAACTCAAACAAGACCAACAGTGCAACGTCGAATCTTTTGCTA 486 Query 504 GTGTTTGGAGAAGCAGAAGA-TGTGACAATTGC-TCTGTTTGATTCTCTGTTTTGCTTCA 561 |||||| |||||||||| | ||| ||||| || ||| |||||||||||||| |||||| Sbjct 487 -TGTTTGTAGAAGCAGAA-ACTGTTACAAT-GCCTCTTTTTGATTCTCTGTTCTGCTTCG 543 Query 562 TGTCTGGATCAAAGACTTGT-AGCAAATGGTCTGTCGTCTCAAAGCTAATGAACAAGAAG 620 |||||||||||||||||||| | || |||||| | | | || | ||||||||| Sbjct 544 TGTCTGGATCAAAGACTTGTGA-CAGATGGTC-G-C-T---AA-G-----GAACAAGAA- 589 Query 621 AAAG-TTACATGTGAAGCT-CAAGGAAACGAATTCAC-AAGGGTTGATTCCGAATTCCAA 677 |||| || || |||| | | |||| ||| |||||||| |||| |||| || || |||||| Sbjct 590 AAAGGTTTCAAGTGA-GATGCAAGCAAAAGAATTCACCAAGG-TTGACTCTGATTTCCAA 647 Query 678 TCCGAAAAGACATTGAAGATGGAAGATGTTCAGATCTTAGAT-TCATGCATTCAAGATCT 736 ||||| ||||| ||||||||||| |||||||||| | ||| | |||||||||||| |||| Sbjct 648 TCCGAGAAGACCTTGAAGATGGAGGATGTTCAGAACCTAG-TGTCATGCATTCAATATCT 706 Query 737 TGAAGATGGACTTGAATCTCTCTCTAAGTCTTTGATCAAATACAGAGTCTCAATTCTTAA 796 |||||||||||||||||| || || ||||| ||||| |||| |||||||||| ||||||| Sbjct 707 TGAAGATGGACTTGAATCACTTTCAAAGTCATTGATTAAATGCAGAGTCTCATTTCTTAA 766 Query 797 CATCTTAGGCCACTAA 812 |||||||||||||||| Sbjct 767 CATCTTAGGCCACTAA 782 > AT4G35210.1 | Symbols: | Arabidopsis protein of unknown function (DUF241) | chr4:16751224-16752239 FORWARD LENGTH=1016 Length=1016 Score = 486 bits (263), Expect = 1e-136 Identities = 629/798 (79%), Gaps = 56/798 (7%) Strand=Plus/Plus Query 17 AAAAATGGCAGTCTCTTTCCACGTTCGCTCTAACAGTTTCCCTTCTAGACTTCCCCCACA 76 ||||||||||||||| ||||| ||||| |||| ||| | |||||| || | | ||| || Sbjct 201 AAAAATGGCAGTCTCCTTCCATGTTCGATCTAGCAGCTACCCTTCAAGGCAACACCCTCA 260 Query 77 AGCCGCTCATGTCGATGAGCAGTTGGCTCGATTAAGATCTTCTGAGGATGCCTCGACATC 136 ||||||||||||||||||||| || | ||||| |||||||||| ||| | | | || Sbjct 261 AGCCGCTCATGTCGATGAGCAATTAACCCGATTGAGATCTTCTG-GGA---C-AG-CTTC 314 Query 137 TTCTAGCTCTTATATCTGCAATAGACTTGA-AAACCTTCAAGAGC-TACATGAGTCTCTT 194 ||| | |||| ||||||| | |||||| | ||||||||||| | ||||||| |||||| Sbjct 315 TTC-A--TCTTCTATCTGCCAGAGACTT-AGCAACCTTCAAGA-CTTACATGATTCTCTT 369 Query 195 GACAAGTTTATTCGCCTACCTGTAACACAA-CAAGCTCTAGGTCAAGAGCAGAACAAGAA 253 || ||| | |||||| || |||| || ||| || ||| || || | ||| | || Sbjct 370 GAAAAGATGATTCGCTTATCTGTCAC-CAACCAGGCTTTA--TC-TCA--AGATC-AG-- 420 Query 254 AGCCGTCGAGCAA-CTTCTTGATGGAT-CTTTAAGGATCTTGGATTTGTGCAACATTTCC 311 | | ||| || ||||||||||||| | | || |||||||| | |||| |||||| Sbjct 421 A----TTGAG-AAGCTTCTTGATGGATCCATCAA-AATCTTGGACCTATGCAGCATTTCT 474 Query 312 AAGGATGCTTTGTCACAGATGAAAGAGGGTCTCATGGAGATCCAATCGATTCTACGAAGA 371 ||||||| |||||| || ||||||||| |||||| |||||||||||||||| || ||||| Sbjct 475 AAGGATGGTTTGTCGCAAATGAAAGAGAGTCTCAAGGAGATCCAATCGATTGTAAGAAGA 534 Query 372 AAGCGCGGTGACCTA-CCGGGAGAGGTCAAGAAATACTTAGCCTCAAGAA-GATCCCTAA 429 ||||| || || ||| || | |||||||||||||||||||||||||||| | | | | | Sbjct 535 AAGCGTGGAGATCTATCC-GCTGAGGTCAAGAAATACTTAGCCTCAAGAAAGTTTC-TCA 592 Query 430 AGAAGTCATTCCAAAAGGTCCTCAAGAGTTTGAAGGTCAAACAAGACCAAGAGTGCGGCG 489 |||| |||||| |||| || ||||||||||| || ||||||| |||| | || Sbjct 593 AGAAATCATTCGAAAAAGTACTCAAGAGTTT-AA----AAACAAG-CCAAAACAAAAACG 646 Query 490 ACAAATCCTTGGCAGTGTTTGGAGAAGCAGAAGA-TGTGACAATTGCTCTGTTTGATTCT 548 || | ||||| |||||||||||||||||| | ||| ||||||||| ||||||| | Sbjct 647 ACGC-T--TTGGCTGTGTTTGGAGAAGCAGAA-ACTGTAACAATTGCTTTGTTTGAAAGT 702 Query 549 CTGTTTTGCTTCATGTCTGGATCAAAGACTTGTAGCAAATGGTCTGTCGTCTCAAAGCTA 608 || ||| |||||||||| ||||||||| ||||| | |||||||| | ||||||||| | Sbjct 703 CTATTTAGCTTCATGTCCGGATCAAAGGCTTGTGGAAAATGGTCACTGGTCTCAAAGATG 762 Query 609 ATGAACAAGAAG-AAAGTTACATGTGAAGCTCAAGGAAACGAATTCACAAGGGTTGAT-T 666 |||| | | ||| |||| ||||||||||||| ||| ||| ||||||||||| || || | Sbjct 763 ATGAGCCA-AAGCAAAGGTACATGTGAAGCTGAAGCAAATGAATTCACAAGAGTAGACAT 821 Query 667 CCGAATTCCAATCCGAAAAGACATTG-AAGATGGAAGATGTTCAGATCTTAGAT-TCATG 724 || ||||||||||||||| | || || ||||| ||||| |||| |||||| | ||| Sbjct 822 G-GAGTTCCAATCCGAAAAGTCGTTACAA-ATGGAGGATGTGCAGAACTTAGAAAT-ATG 878 Query 725 CATTCAAGATCTTGAAGATGG-ACTTGAATCTCTCTCTAAGTCTTTGATCAAATACAGAG 783 ||||||||||||||||||||| | ||| || |||||||| || |||||||||||||||| Sbjct 879 CATTCAAGATCTTGAAGATGGGA-TTGGGTCACTCTCTAAATCATTGATCAAATACAGAG 937 Query 784 TCTCAATTCTTAACATCT 801 |||| ||||||||||||| Sbjct 938 TCTCTATTCTTAACATCT 955 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40589190776 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5