BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931554
Length=832
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17070.1 | Symbols: | Arabidopsis protein of unknown functi... 1258 0.0
AT2G17080.1 | Symbols: | Arabidopsis protein of unknown functi... 948 0.0
AT4G35200.1 | Symbols: | Arabidopsis protein of unknown functi... 553 1e-156
> AT2G17070.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr2:7430863-7431654 REVERSE LENGTH=792
Length=792
Score = 1258 bits (681), Expect = 0.0
Identities = 756/793 (95%), Gaps = 2/793 (0%)
Strand=Plus/Plus
Query 21 ATGGCTGTCTCCTTCCACGTTCGCTCCCACAGTTATCCCTCGATACCTCACCCACAAGCC 80
||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct 1 ATGGCTGTCTCCTTCCACGTTCGATCTCACAGTTACCCCTCGATACCTCACCCACAAGCC 60
Query 81 ACTCATGTTGATGAGCAGTTGGCCGGATTAAGATCTTCTGAAGAAACCTCAACATCTTCA 140
||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 61 GCTCATGTTGATGAGCAGTTGGCCAGATTAAGATCTTCTGAGGAAACCTCAACATCTTCA 120
Query 141 AGCTCTTCTATCTGTCAAAGACTTGACAACCTTCAAG-ACTTACATGAGTCTCTTGACAA 199
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 121 AGCTCTTCTATCTGTCAAAGACTTGACAACCTTCAAGAAC-TACATGAGTCTCTTGACAA 179
Query 200 GCTTATCCGCCTACCCGTTACACAACACGCTTTAGGTCAAGAGCAGAACAAGAAAGCCGT 259
|||||| |||||||||||||||||||| ||| | ||||||||| |||||||||||| |||
Sbjct 180 GCTTATTCGCCTACCCGTTACACAACAGGCTCTCGGTCAAGAGAAGAACAAGAAAGACGT 239
Query 260 TGAGCAGCTTCTTGATGGATCTCTCAGGATCTTGGATGTGTGCAACATTTCCAAGGATGC 319
|||||| ||||||||||||||||||| ||| ||||||||||||||||| |||||||||||
Sbjct 240 TGAGCAACTTCTTGATGGATCTCTCAAGATATTGGATGTGTGCAACATATCCAAGGATGC 299
Query 320 TTTGTCCCAGATGAAAGAAGGTCTCATGGAGATCCAATCGATTCTAAGAAGAAAGCGCGG 379
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 300 TTTGTCGCAGATGAAAGAAGGTCTCATGGAGATCCAATCTATTCTAAGAAGAAAGCGCGG 359
Query 380 AGATCTATCAGGAGAGGTCAAGAAATACTTAGCTTCAAGAAAGTCCTTCAAGAAGACAAT 439
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
Sbjct 360 AGATCTATCAGGAGAGGTGAAGAAATACTTAGCCTCAAGAAAGTCCTTCAAGAAGACATT 419
Query 440 CCAGAAAGTACAAAAGTCTCTCAAGGTTGCACAAGCCGAAGACAACAACGACAAATCTTT 499
|||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||
Sbjct 420 CCAGAAAGTACAAAAGTCCCTCAAGGCTGCACAAGCAGAAGACAACAAGGACAAATCTTT 479
Query 500 GGCTGTGTTTGGAGAAGCAGAAGCCGTTACAATTGCTCTGTTTGATTCTCTCTTTAGCTA 559
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 480 GGCTGTGTTTGGAGAAGCAGAAGCTGTTACAATTGCTATGTTTGATTCTCTCTTTAGCTA 539
Query 560 CATGTCTGGATCAAAGACTTGTAGCAAATGGTCAGTCGTCTCAAAGCTAATGAACAAGAA 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 CATGTCTGGATCAAAGACTTGTAGCAAATGGTCAGTCGTCTCAAAGCTAATGAACAAGAA 599
Query 620 GAAAATTACATGTGAAGCACAAGAAAACGAATTCACTAAGGTTGACTCCGAATTCCAATC 679
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 600 GAAAATTACATGTGAAGCACAAGAAAACGAATTCACCAAGGTTGACTCCGAGTTCCAATC 659
Query 680 CGAGAAGACTTTGAAAATGGAGGATGTGCAGATCCTAGAGTCATGCATTCAAGATTTGGA 739
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||
Sbjct 660 CGAGAAGACTTTGAAAATGGAGGACGTTCAGATCCTAGAGTCATGCATTCAAGATTTCGA 719
Query 740 AGATGGACTTGAATCATTATCTAATTCATTGATCAAATACAGAGTTTCAATTCTTAACAG 799
||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 720 AGATGGACTAGAATCATTATCTAAGTCTTTGATCAAATACAGAGTTTCAATTCTTAACAG 779
Query 800 CTTTGGCCATTAA 812
|||||||||||||
Sbjct 780 CTTTGGCCATTAA 792
> AT2G17080.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr2:7433326-7434117 REVERSE LENGTH=792
Length=792
Score = 948 bits (513), Expect = 0.0
Identities = 708/801 (88%), Gaps = 18/801 (2%)
Strand=Plus/Plus
Query 21 ATGGCTGTCTCCTTCCACGTTCGCTCCCACAG-TTATCCCTCGATACCTCACCCACAAGC 79
||||| ||||||||||||||||| || |||| || ||||| | | |||||||||||||
Sbjct 1 ATGGCAGTCTCCTTCCACGTTCGATCTAACAGCTT-CCCCTCAAGATCTCACCCACAAGC 59
Query 80 CACTCATGTTGATGAGCAGTTGGCCGGATTAAGATCTTCTGAAG-AAACCTCAACATCTT 138
||||||| ||||||||||||||| | || |||||||| | || || ||||| ||||||
Sbjct 60 TGCTCATGTGGATGAGCAGTTGGCCCGTTTGAGATCTTCCG-AGCAAGCCTCATCATCTT 118
Query 139 CAAGCTCTTCTATCTGTCAAAGACTTGACAACCTTCAAG-ACTTACATGAGTCTCTTGAC 197
| |||||||||||||| ||||| |||||||||||||||| || |||||||||||||||||
Sbjct 119 CCAGCTCTTCTATCTGCCAAAGGCTTGACAACCTTCAAGAAC-TACATGAGTCTCTTGAC 177
Query 198 AAGCTTATCCGCCTACCCGTTACACAACACGCT-TTAGGTCAAGAGCAGAACAAGAAAGC 256
||||||||| ||| ||| || |||||||| ||| || ||||||||| |||||||||||
Sbjct 178 AAGCTTATCAGCCGACCTGTCACACAACAGGCTCTT-TCTCAAGAGCATAACAAGAAAGC 236
Query 257 CGTTGAGCAGCTTCTTGATGGATCTCTCAGGATCTTGGATGTGTGCAACATTTCCAAGGA 316
|||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 237 CGTTGAACAGCTTCTTGATGGATCCCTCAGGATCTTGGATTTGTGCAACATTTCCAAGGA 296
Query 317 TGCTTTGTCCCAGATGAAAGAAGGTCTCATGGAGATCCAATCGATTCTAAGAAGAAAGCG 376
||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 297 TGCTTTGTCAGAGATGAAAGAGGGTCTCATGGAGATCCAATCAATTCTAAGAAGAAAGCG 356
Query 377 CGGAGATCTATCAGG-AGAGGTCAAGAAATACTTAGCTTCAAGAAAGTC-CTTCAAGAAG 434
|| |||||||| || ||| ||||||||||||||| | |||||||| || ||| ||||||
Sbjct 357 TGGTGATCTATC-GGAAGAAGTCAAGAAATACTTAACCTCAAGAAAATCTCTT-AAGAAG 414
Query 435 ACAATCCAGAAAGTACAAAAGTCTCTCAAGGTTGCACAAGCCGAAGACAACAACGA-CAA 493
|| |||||||||||||||||||| | |||||| ||||||| |||||||||||||| |
Sbjct 415 TCATTCCAGAAAGTACAAAAGTCTTTGAAGGTTACACAAGCTGAAGACAACAACGATGAC 474
Query 494 ATCTTTGGCTGTGTTTGGAGAAGCAGAAGCCGTTACAATTGCTCTGTTTGATTCTCTCTT 553
| |||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| |
Sbjct 475 A-CTTTGGCTGTCTTTGGAGAAGCAGAAGCTATTACACTTTCTCTGTTTGATTCTCTCCT 533
Query 554 TAGCTACATGTCTGGATCAAAGACTTGTAGCAAATGGTCAGTCGTCTCAAAGCTAATGAA 613
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 534 TAGCTACATGTCTGGATCAAAGACTTGTAGTAAATGGTCAGTCGTCTCAAAGCTAATGAA 593
Query 614 CAAGAAGAAAATTACATGTGAAGCACAAGAAAACGAATTCACTAAGGTTGACTCCGAATT 673
|||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||
Sbjct 594 CAAGAAGAAAGTTACATGTGAAGCGCAAGAAAACGAATTCACGAAGGTTGATTCCGAATT 653
Query 674 CCAATCCGAGAAGACTTTGAAAATGGAGGATGTGCAGATCCTAGAGTCATGCATTCAAGA 733
|||||||| ||||| ||||| ||||| ||||| |||| |||||||||||||||||||||
Sbjct 654 TCAATCCGAAAAGACCTTGAAGATGGATGATGTTCAGAACCTAGAGTCATGCATTCAAGA 713
Query 734 T-TTGGAAGATGGACTTGAATCA-TTATCTAATTCATTGATCAAATACAGAGTTTCAATT 791
| ||| ||||||||||||||||| || || || |||||||| ||||||||||| ||| ||
Sbjct 714 TCTTG-AAGATGGACTTGAATCACTT-TCAAAGTCATTGATTAAATACAGAGTCTCATTT 771
Query 792 CTTAACAGCTTTGGCCATTAA 812
||||||| ||| ||||| |||
Sbjct 772 CTTAACATCTTAGGCCACTAA 792
> AT4G35200.1 | Symbols: | Arabidopsis protein of unknown function
(DUF241) | chr4:16749142-16749903 REVERSE LENGTH=762
Length=762
Score = 553 bits (299), Expect = 1e-156
Identities = 642/798 (80%), Gaps = 61/798 (8%)
Strand=Plus/Plus
Query 21 ATGGCTGTCTCCTTCCACGTTCGCTCCCACAGTTATCCC-TCGATACCTCACCCACAAGC 79
||||| ||||||||||| ||||| || |||| || ||| |||| || ||||| |||||
Sbjct 1 ATGGCAGTCTCCTTCCATGTTCGATCTAACAGCTA-CCCTTCGAGACAACACCCTCAAGC 59
Query 80 CACTCATGTTGATGAGCAGTTGGCCGGATTAAGATCTTCTGAAGAAACCTCAACATCTTC 139
| ||||||| |||||||| ||| || |||| ||||||||| | | ||| | |||||
Sbjct 60 CGCTCATGTCGATGAGCAATTGACCAGATTGAGATCTTCT---G--A-TTCAGCCTCTTC 113
Query 140 AAGCTCTTCTATCTGTCAAAGACTTGA-CAACCTTCAAGACTTACATGAGTCTCTTGACA 198
| ||||||||||| || |||||| | |||||||||||| |||||||| |||||||| |
Sbjct 114 -A--TCTTCTATCTGCCAGAGACTT-AGCAACCTTCAAGATTTACATGATTCTCTTGAAA 169
Query 199 AGCTTATCCGCCTACCCGTTACACAA-C-ACGCTTTAGGTCAAGAGCAGAACAAGAAAGC 256
|| | || ||| | | || || ||| | | |||||| || | ||| | || |
Sbjct 170 AGATGATTCGCTTGTCTGTCAC-CAACCTA-GCTTTA--TC-TCA--AGATC-AG--A-- 217
Query 257 CGTTGAGCAGCTTCTTGATGGATCTCTCAGGATCTTGGATGTGTGCAACATTTCCAAGGA 316
||||| | |||||||||||||||||||||||||| ||| ||||||| || |||||||
Sbjct 218 --TTGAGAAACTTCTTGATGGATCTCTCAGGATCTTAGATTTGTGCAATATAGCCAAGGA 275
Query 317 TGC-TTTGTCCCAGATGAAAGAAGGTCTCATGGAGATCCAATCGATTCTAAGAAGAAAGC 375
||| || || |||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 276 TGCGATT-TCACAGATGAAAGAAGGTCTCATGGAGATCCAATCTATTCTACGAAGAAAGC 334
Query 376 GC-GGAGATCTATCAGGAGAGGTCAAGAAATACTTAG-CTTCAAGAAAGT-CCTTCAAGA 432
| ||||||||||| |||||||||||||||||||||| || ||||||||| ||| |||||
Sbjct 335 -CTGGAGATCTATCCGGAGAGGTCAAGAAATACTTAGTCT-CAAGAAAGTTCCT-CAAGA 391
Query 433 AGA-CAATCCAGAAAGTA--CAAAAGTCTCTCAAGGT-TGCACAA-GCCGAAGA--CAAC 485
| | || |||| |||||| ||| ||| | | || || ||| ||| || |||| | ||
Sbjct 392 A-ATCACTCCAAAAAGTAATCAAGAGT-T-TGAAAGTGTGC-CAAAGCA-AAGATTCCAC 446
Query 486 -AACGACAAATCTTTGGCTGTGTTTGGA-GAAGCAGAAGCCGTTACAATTGCTCTGTTTG 543
|| | || ||||||| ||| |||||| || |||||||| || ||||| ||||||||||
Sbjct 447 CAATG-CA--TCTTTGGTTGTATTTGGAAGA-GCAGAAGCTGTAACAATGGCTCTGTTTG 502
Query 544 ATTCTCTCTTTAGCTACATGTCTGGATCAAAGACTTGTAGCAAATGGTCAGTCGTCTCAA 603
| ||||| ||||||| |||||| ||||||||| ||||| | ||||||||| | |||||||
Sbjct 503 AATCTCTGTTTAGCTTCATGTCCGGATCAAAGGCTTGTGGGAAATGGTCATTGGTCTCAA 562
Query 604 AGCTAATGAAC-AAGAAGAAAATTACATGTGAAGCACAAGAAAACGAATTCACTAAGGTT 662
|| | |||| | || || ||| |||||||||||||| ||| ||| |||||||| |||| |
Sbjct 563 AGATGATGAGCCAA-AACAAAGTTACATGTGAAGCAGAAGCAAATGAATTCAC-AAGGAT 620
Query 663 -GACTCCGAATTCCAATCCGAGAAGACTTTGAAAATGGAGGATGTGCAGATCCTAGAGTC 721
|| || || ||||||||||| ||| | ||| | |||||||||||||||| | |||||||
Sbjct 621 CGATTCTGAGTTCCAATCCGAAAAGTCGTTGCAGATGGAGGATGTGCAGAACTTAGAGTC 680
Query 722 ATGCATTCAAGAT-TTGGAAGATGGACTTGAATCATTATCTAATTCATTGATCAAATACA 780
||||||||||||| ||| |||||||| |||| ||| | ||||| ||||| ||||||||||
Sbjct 681 ATGCATTCAAGATCTTG-AAGATGGAATTGAGTCACTCTCTAAATCATTAATCAAATACA 739
Query 781 GAGTTTCAATTCTTAACA 798
|||||||||| |||||||
Sbjct 740 GAGTTTCAATCCTTAACA 757
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40538956629
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5