BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931559 Length=859 Score E Sequences producing significant alignments: (Bits) Value AT1G72680.1 | Symbols: ATCAD1, CAD1 | cinnamyl-alcohol dehydrog... 996 0.0 AT2G44120.2 | Symbols: | Ribosomal protein L30/L7 family prote... 213 2e-54 > AT1G72680.1 | Symbols: ATCAD1, CAD1 | cinnamyl-alcohol dehydrogenase | chr1:27359232-27361016 REVERSE LENGTH=1322 Length=1322 Score = 996 bits (539), Expect = 0.0 Identities = 601/631 (95%), Gaps = 4/631 (1%) Strand=Plus/Plus Query 198 CCTAATGTTCAACGATTCAAAGTTGGAGACCATGTTGGTGTTAGAACGTATGTTAACTCC 257 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 381 CCTAATGTTCAACGATTCAAAGTTGGAGACCATGTTGGTGTTGGAACGTATGTTAACTCC 440 Query 258 TGCAGGGAGTGTGAATATTGTAACGACGGACAAGCAGTTAATTGTGCAAAAGGAGTTTTT 317 ||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||| Sbjct 441 TGCAGGGAGTGTGAATATTGTAATGAAGGACAAGAAGTTAATTGTGCGAAAGGAGTTTTT 500 Query 318 ACTTTCAATGGTATCGATCATGATGGCTCTGTTACTAAAGGAGGCTACTCCAGCCACATT 377 ||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||| Sbjct 501 ACTTTCAATGGCATTGATCATGATGGCTCTGTTACTAAAGGAGGCTACTCTAGTCACATT 560 Query 378 GTTGTTCATGAGAGGTACTGCTACAAGATACCTGTGGACTATCCCTTGGAATCAGCTGCA 437 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 561 GTTGTTCATGAAAGGTACTGCTACAAGATACCTGTGGACTATCCCTTGGAATCAGCTGCA 620 Query 438 CCATTACTCTGTGCTGGAATCACGGTTTTTGCGCCTATGATGCATCACAATATGAATCAA 497 |||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||| Sbjct 621 CCATTACTCTGTGCTGGAATCACGGTTTATGCTCCTATGATGCGTCACAATATGAATCAA 680 Query 498 CCTGGTAAATCTCTTGGGGTGATTGGGCTAGGTGGTCTTGGGCACATGGCAGTTAAATTT 557 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||| Sbjct 681 CCTGGTAAATCTCTTGGGGTGATCGGGCTAGGTGGTCTTGGACACATGGCGGTTAAGTTT 740 Query 558 GGCAAGGCTTTTGGACTTAGTGTTACGGTTTTTAGCACCAGCATTTCCAAGAAAGAGGAA 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 741 GGCAAGGCTTTTGGACTTAGTGTTACGGTTTTTAGCACCAGCATTTCCAAGAAAGAAGAA 800 Query 618 GCTTTGAATCTGCTGGGAGCTGAGAATTTTGTTATCTCGTCTGACCATG-CTCAGATGAA 676 |||||||||||||| |||||||||||||| |||||||| |||||||||| | |||||||| Sbjct 801 GCTTTGAATCTGCTAGGAGCTGAGAATTTCGTTATCTCATCTGACCATGAC-CAGATGAA 859 Query 677 GGCACTAGCGAAATCTCTAGACTTTATCA-TTGATACAGCATCTGGTGATCACGCGTTTG 735 |||||||| |||||||||||||||| | | |||| ||||||||||||||||||||||||| Sbjct 860 GGCACTAGAGAAATCTCTAGACTTTCT-AGTTGACACAGCATCTGGTGATCACGCGTTTG 918 Query 736 ATCCTTACATGTCTCTCTTGAAGATTGCTGGAACTTATGTCCTGGTTGGTTTCCCAAGTG 795 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 919 ATCCTTACATGTCTCTCTTGAAGATTGCTGGAACTTATGTATTGGTTGGTTTCCCAAGTG 978 Query 796 AAATTAAAATCAGTCCTGCCAATCTCAATCT 826 ||||||||||||||||||||||||||||||| Sbjct 979 AAATTAAAATCAGTCCTGCCAATCTCAATCT 1009 > AT2G44120.2 | Symbols: | Ribosomal protein L30/L7 family protein | chr2:18249042-18250708 REVERSE LENGTH=1220 Length=1220 Score = 213 bits (115), Expect = 2e-54 Identities = 140/152 (92%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 1 TCCAAGAGTCTGTGCTAAAAAAGATCAAGAGGCAAGTGGAATGGACATTGGTCAAGAAAG 60 ||| ||||||||||||||| |||||||||||||||| ||||||| |||||| |||||||| Sbjct 330 TCC-AGAGTCTGTGCTAAAGAAGATCAAGAGGCAAGAGGAATGGGCATTGGCCAAGAAAG 388 Query 61 ATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGACCCGCAAGCTCATCTTCAAGAGAG 120 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 389 ATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTGAGGCCCGCAAGCTTATCTTCAAGAGAG 448 Query 121 CTGAGCAGTATGAGAGAGAGTATGCTGAGAAG 152 |||||||||||| | ||| || ||||||||| Sbjct 449 CTGAGCAGTATGCCAAAGAATACGCTGAGAAG 480 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41895278598 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5