BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931587
Length=1126
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17320.1 | Symbols: | Uncharacterised conserved protein (UC... 1764 0.0
AT2G17340.1 | Symbols: | Uncharacterised conserved protein (UC... 1543 0.0
AT4G35360.1 | Symbols: | Uncharacterised conserved protein (UC... 1164 0.0
> AT2G17320.1 | Symbols: | Uncharacterised conserved protein (UCP030210)
| chr2:7533480-7535942 REVERSE LENGTH=1209
Length=1209
Score = 1764 bits (955), Expect = 0.0
Identities = 1069/1125 (95%), Gaps = 3/1125 (0%)
Strand=Plus/Plus
Query 1 TCGTCGTTAACAATTTGGAGATGATTCCGTTTCCTCTGTTACCGACGCCGATTGAAACCA 60
||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 47 TCGTCGTTATCAATTCGGAGATGATTCCGTTTCCTCTGTTACCAACGCCGATTGAAACCA 106
Query 61 ACTACAGAGCCTGCACCATTCCTTATAGATTCCCTTGTGATAATCTGAAGAAAGCCACTC 120
|||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 107 ACTACAGAGCTTGCACCATTCCTTATAGATTCCCTTCCGATAATCTCAAGAAAGCCACTC 166
Query 121 CTACTGAAATCTCGTGGATCAACGTCTTCGCTAATTCCATCCCTTCGTTCAAGAAACGAG 180
||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||||||| |
Sbjct 167 CTACTGAAATCTCCTGGATCAACGTCTTCGCCAATTCCATTCCTTCTTTCAAGAAACGTG 226
Query 181 CAGAGAGCGATATCACTGTTCCAGATGCTCCTGCGAGAGCTAAAATATTTGCAGAAAGAT 240
|||||||||||| || |||||||||||||||||| ||||||||||| |||| | ||||||
Sbjct 227 CAGAGAGCGATACCAGTGTTCCAGATGCTCCTGCTAGAGCTAAAATTTTTGAACAAAGAT 286
Query 241 ATGCGGGAATTCTTGAAGATTGGAAGAAAGATCCAGAGAGCAATGGCGGGCCACCAGATG 300
|||||||| ||||||||| |||||||||||||||||||| ||||| |||||||||||||
Sbjct 287 ATGCGGGATTTCTTGAAGGCTGGAAGAAAGATCCAGAGAGTAATGGTGGGCCACCAGATG 346
Query 301 GCATTATTCTCGGCCGAGTTCGTGAGCATTTACTCAGAGAGTTAGGATTTAAGGACATAT 360
| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 347 GTGTTATTCTCGGCCGAGTTCGTGAGCATTTACTCAGAGAGTTAGGATTTAGGGACATAT 406
Query 361 TCAAGAAAGTCAAGGATGAAGAGAATGCAAAGGCTATATCACTATTTCCTGAAGTTGTCA 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 407 TCAAGAAAGTCAAGGATGAGGAGAATGCAAAGGCTATATCACTATTTCCTGAAGTTGTCA 466
Query 421 GTCTGAGTGATGCTATTGAAGATGACGGAAAACGGTTAGAGAATTTGGTGAGAGGGATAT 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 467 GTCTGAGTGATGCTATTGAAGATGACGGAGAACGGTTAGAGAATTTGGTGAGAGGGATAT 526
Query 481 TTGCTGGAAACATCTTTGATCTAGGTTCTGCACAGCTTGCTGAGGTTTTCTCAAGGGATG 540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 527 TTGCTGGAAACATCTTTGATCTTGGTTCTGCACAGCTTGCTGAGGTTTTCTCAAGGGATG 586
Query 541 GCATATCTTTCTTGGCTACCTGTCAAAACTTGGTACCACGACCTTGGGTCATTGATGACT 600
||||||||||||||||||||| |||||||||||| |||||||| |||||||| |||||||
Sbjct 587 GCATATCTTTCTTGGCTACCTCTCAAAACTTGGTTCCACGACCATGGGTCATCGATGACT 646
Query 601 TGGACAACTTCCAAGCCAAATGGATCAAGAAGCCTTGGAAGAAGGCAGTGATATTTGTTG 660
|| |||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 647 TGAACAAGTTCCAAGCCAAATGGGTCAAGAAGCCTTGGAAGAAGGCAGTGATTTTTGTTG 706
Query 661 ATAATTCTGGTGCAGACATAATTTTGGGTATTTTGCCGTTT-GCAAGAGAGCTGCTCCGT 719
||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||
Sbjct 707 ATAATTCTGGTGCAGACATAATTTTGGGTATTTTGCC-TTTCGCAAGAGAGTTGCTCCGT 765
Query 720 CGAGGAACTCAGGTGGTGCTGGCTGCTAACGAGCTGCCAGCTATCAACGATGTAACATAT 779
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 766 CGAGGAATTCAGGTGGTGCTAGCTGCTAACGAGCTGCCAGCTATCAACGATGTAACATAT 825
Query 780 ACCGAGCTTACAGATATTGTGTCGCAGTTGAAGGATGGAAATGGCCAATTGATAGGTGTT 839
|| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct 826 ACTGAGCTTACAGATATCGTGTCGCAGTTAAAGGATGGAAATGGCCAATTGATAGGCGTT 885
Query 840 GATACTTCAAAGCTTCTGATTGCAAATTCAGGGAATGATTTAGCGGTTATCGATCTCTCA 899
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 886 GATACTTCAAAGCTTCTGATTGCAAATTCAGGGAACGATTTAGCGGTTATTGATCTCTCA 945
Query 900 AGAGTATCACATGAGCTTGCTTACCTTTCATCTGATGCAGACTTAGTCATCCTAGAAGGC 959
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 AGAGTATCGCACGAGCTTGCTTACCTTTCATCTGATGCAGACTTAGTCATCCTAGAAGGC 1005
Query 960 ATGGGTCGTGGGATCGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTCAAGATC 1019
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1006 ATGGGTCGCGGGATCGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTCAAGATC 1065
Query 1020 GGAATGGTGAAGCATGTTGAAGTAGCACAGTTTCTCGGAGGACGACTTTACGACTGTGTC 1079
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 GGAATGGTGAAGCACGTTGAAGTAGCACAGTTTCTCGGAGGACGACTTTACGACTGTGTC 1125
Query 1080 TTTAAATACAATGAAGTTCAGAGTTAAT-ACATTTCAGTAATATT 1123
||||||| |||||||||||||||||||| |||||||| | |||||
Sbjct 1126 TTTAAATTCAATGAAGTTCAGAGTTAATTACATTTCAATGATATT 1170
> AT2G17340.1 | Symbols: | Uncharacterised conserved protein (UCP030210)
| chr2:7541406-7544128 REVERSE LENGTH=1352
Length=1352
Score = 1543 bits (835), Expect = 0.0
Identities = 1019/1108 (92%), Gaps = 12/1108 (1%)
Strand=Plus/Plus
Query 18 GAGATGATTCCGTTTCCTCTGTTACCGACGCCGATTGAAACCAACTACAGAGCCTGCACC 77
|||||| |||||||||||| |||||| ||| || |||| |||||||||||| |||||
Sbjct 55 GAGATGGTTCCGTTTCCTCAACTACCGATGCCAATAGAAAACAACTACAGAGCTTGCACA 114
Query 78 ATTCCTTATAGATTCCCTTGTGATAATCTGAAGAAAGCCACTCCTACTGAAATCTCGTGG 137
|||||||| ||||| |||| |||| ||| |||||||||||||| | |||||||||||||
Sbjct 115 ATTCCTTACAGATTTCCTTCTGATGATCCCAAGAAAGCCACTCCAAATGAAATCTCGTGG 174
Query 138 ATCAACGTCTTCGCTAATTCCATCCCTTCGTTCAAGAAACGAGCAGAGAGCGATATCACT 197
|||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct 175 ATCAACGTCTTCGCCAATTCCATTCCTTCTTTCAAGAAACGTGCAGAGAGCGATATCACT 234
Query 198 GTTCCAGATGCTCCTGCGAGAGCT-AAAATATTTGCAGAAAGATATGC-GGGAATTCTTG 255
||||||||||||||||| |||||| |||| |||||||||||||||||| ||| |||||||
Sbjct 235 GTTCCAGATGCTCCTGCTAGAGCTGAAAA-ATTTGCAGAAAGATATGCTGGG-ATTCTTG 292
Query 256 AAGA-TTGGAAGAAAGATCCAGAGAG-CAATGGCGGGCCACCAGATGGCATTATTCTCGG 313
|||| || |||||||||||||||||| | ||||||| ||||||||||||||| |||| |
Sbjct 293 AAGACTT-GAAGAAAGATCCAGAGAGTC-ATGGCGGACCACCAGATGGCATTCTTCTATG 350
Query 314 CCGAGTTCGTGAGCATTTACTCAGAGAGTTAGGATTTAAGGACATATTCAAGAAAGTCAA 373
|||| |||||||||| ||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 351 CCGACTTCGTGAGCAAGTACTCAGAGAGTTAGGATTTAGGGACATATTCAAGAAAGTTAA 410
Query 374 GGATGAAGAGAATGCAAAGGCTATATCACTATTTCCTGAAGTTGTCAGTCTGAGTGATGC 433
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 411 GGATGAGGAGAATGCAAAGGCTATATCACTATTTCCTCAAGTTGTCAGTCTGAGTGATGC 470
Query 434 TATTGAAGATGACGGAAAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGGAAACAT 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 471 TATTGAAGATGACGGAAAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGGAAACAT 530
Query 494 CTTTGATCTAGGTTCTGCACAGCTTGCTGAGGTTTTCTCAAGGGATGGCATATCTTTCTT 553
||||||||| |||||||||||||||||||| ||||||||||||||||| || ||||||||
Sbjct 531 CTTTGATCTTGGTTCTGCACAGCTTGCTGAAGTTTTCTCAAGGGATGGTATGTCTTTCTT 590
Query 554 GGCTACCTGTCAAAACTTGGTACCACGACCTTGGGTCATTGATGACTTGGACAACTTCCA 613
||||| ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 591 GGCTAGCTGTCAAAACTTGGTTCCACGACCATGGGTCATTGATGACTTGGAAAACTTCCA 650
Query 614 AGCCAAATGGATCAAGAAGCCTTGGAAGAAGGCAGTGATATTTGTTGATAATTCTGGTGC 673
||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 651 AGCCAAATGGATCAATAAGTCTTGGAAGAAGGCAGTGATTTTTGTTGATAATTCTGGTGC 710
Query 674 AGACATAATTTTGGGTATTTTGCCGTTTGCAAGAGAGCTGCTCCGTCGAGGAACTCAGGT 733
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 711 AGACATAATTTTGGGTATTTTGCCGTTTGCAAGAGAGTTGCTCCGTCGAGGAGCTCAGGT 770
Query 734 GGTGCTGGCTGCTAACGAGCTGCCAGCTATCAACGATGTAACATATACCGAGCTTACAGA 793
||||||||||||||| ||||||||| ||||||| || |||||| |||||||||||||||
Sbjct 771 GGTGCTGGCTGCTAATGAGCTGCCATCTATCAATGACATAACATGTACCGAGCTTACAGA 830
Query 794 TAT-TGTGTCGCAGTTGAAGGATGGAAATGGCCAATTGATAGGTGTTGATACTTCAAAGC 852
|| | |||| ||||||||||||| ||||||||||||| |||||||||||||||| ||||
Sbjct 831 AATCT-TGTCACAGTTGAAGGATGAAAATGGCCAATTGCTAGGTGTTGATACTTCGAAGC 889
Query 853 TTCTGATTGCAAATTCAGGGAATGATTTAGCGGTTATCGATCTCTCAAGAGTATCACATG 912
|||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||| |
Sbjct 890 TTCTGATTGCAAATTCGGGGAATGACTTACCAGTTATCGATCTCTCAAGAGTATCACAGG 949
Query 913 AGCTTGCTTACCTTTCATCTGATGCAGACTTAGTCATCCTAGAAGGCATGGGTCGTGGGA 972
||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |
Sbjct 950 AGCTTGCTTACCTTTCATCTGATGCCGACTTAGTCATCGTAGAAGGCATGGGTCGTGGAA 1009
Query 973 TCGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTCAAGATCGGAATGGTGAAGC 1032
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1010 TTGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTCAAGATTGGAATGGTGAAGC 1069
Query 1033 ATGTTGAAGTAGCACAGTTTCTCGGAGGACGACTTTACGACTGTGTCTTTAAATACAATG 1092
|| ||||||||||| |||||||||||||||| || || ||||||||||| |||| |||||
Sbjct 1070 ATCTTGAAGTAGCAGAGTTTCTCGGAGGACGGCTCTATGACTGTGTCTTCAAATTCAATG 1129
Query 1093 AAGTTCAGAGTTAAT-AC-ATTTCAGTA 1118
|||||||||| |||| | |||||||||
Sbjct 1130 AAGTTCAGAGCTAATTAGTATTTCAGTA 1157
> AT4G35360.1 | Symbols: | Uncharacterised conserved protein (UCP030210)
| chr4:16812116-16814745 REVERSE LENGTH=1380
Length=1380
Score = 1164 bits (630), Expect = 0.0
Identities = 959/1115 (86%), Gaps = 33/1115 (3%)
Strand=Plus/Plus
Query 18 GAGATGATTCCGTTTCCTCTGTTACCGACGCCGATTGAAACCAACTACAGAGCCTGCACC 77
|||||| | |||| |||||||||||||| ||||| ||| | |||||||| || ||||||
Sbjct 105 GAGATGGTAGCGTTGCCTCTGTTACCGACTCCGATAGAATCGAACTACAGGGCTTGCACC 164
Query 78 ATTCCTTATAGATTCCCTTGTGATAAT-CTGAAGAAA-GCCACTCCTACTGAAATCTCGT 135
||||||||| ||||||||| ||||||| || ||||| || ||||| ||||| ||||| |
Sbjct 165 ATTCCTTATCGATTCCCTTCTGATAATCCT--AGAAAGGCTACTCCCACTGAGATCTCCT 222
Query 136 GGATC-AACGTCTTCGCTAATTCCATCCCTTCGTTCAAGAAACGAGCAGAGAGCGATATC 194
||||| | | ||||| | |||||||||||||| |||||| |||| ||||||||||||| |
Sbjct 223 GGATCGATC-TCTTCTCCAATTCCATCCCTTCTTTCAAGGAACGTGCAGAGAGCGATA-C 280
Query 195 -ACTGTTCCAGATGCTCCTGCGAGAGCT-AAAATATTTG-CAGAAAGATATGCGGGA-AT 250
|| |||||||||||||||| ||||| |||| |||| || |||| ||||| ||| ||
Sbjct 281 AACCGTTCCAGATGCTCCTGTTCGAGCTGAAAA-GTTTGCCA-AAAGGTATGC-GGAGAT 337
Query 251 TCTTGAAGA-TTGGAAGAAAGATCCAGAGAGCAATGGCGGGCCACCAGATGGCATTATTC 309
|||||| || | |||||||||||| |||||| |||| || ||||| ||| ||||| |||
Sbjct 338 TCTTGAGGACCT-GAAGAAAGATCCGGAGAGCCATGGTGGTCCACCGGATTGCATTCTTC 396
Query 310 TCGGCCGAGTTCGTGAGCAT-TTACTCAGAGAGTTAGGATTTAAGGACATATTCAAGAAA 368
|| || || ||||||||| | |||| ||||| || ||||||| ||||||||| ||||||
Sbjct 397 TCTGCAGAATTCGTGAGC-TGATACTAAGAGAATTGGGATTTAGGGACATATTTAAGAAA 455
Query 369 GTCAAGGATGAAGAGAATGCAAAGGCTATATCACTATTTCCTGAAGTTGTCAGTCTGAGT 428
|| |||||||| |||||||||||||| |||||||||||||||||||||||| || |||||
Sbjct 456 GTTAAGGATGAGGAGAATGCAAAGGCAATATCACTATTTCCTGAAGTTGTCCGTTTGAGT 515
Query 429 GATGCTATTGAA-GATGACGGAAAACGGTTAGAGAATTTGGTGAGAGGGATATTTGCTGG 487
||||||||| || ||||| || || || |||||||| |||| |||||||||||||||||
Sbjct 516 GATGCTATT-AACGATGAAGGCAAGCGCATAGAGAATCTGGTCAGAGGGATATTTGCTGG 574
Query 488 AAACATCTTTGATCTAGGTTCTGCACAGCTTGCTGAGGTTTTCTCAAGGGATGGCATAT- 546
||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| |
Sbjct 575 AAACATCTTTGATCTGGGTTCTGCACAGCTTGCTGAGGTTTTCTCAAAAGACGGCATGTC 634
Query 547 CTTTCTTGGCTACCTGTCAAAACTTGGTACCACGACCTTGGGTCATTGATGACTTGGACA 606
|||| ||||||| |||||| |||||||| ||||||| |||||||||||||||||||| |
Sbjct 635 CTTT-TTGGCTAGCTGTCAGAACTTGGTTTCACGACCATGGGTCATTGATGACTTGGATA 693
Query 607 ACTTCCAAGCCAAATGGATCAAGAAGCCTTGGAAGAAGGCAGTGATATTTGTTGATAATT 666
|||| ||||| | |||| |||||||||||||||||||||| ||||||||||| |||||||
Sbjct 694 ACTTTCAAGCTAGATGGCTCAAGAAGCCTTGGAAGAAGGCTGTGATATTTGTCGATAATT 753
Query 667 CTGGTGCAGACATAATTTTGGGTATTTTGCCGTTTGCAAGAGAGCTGCTCCGTCGAGGAA 726
||||||||||||||||||||||||| ||||| ||||| ||||| |||| |||| |||||
Sbjct 754 CTGGTGCAGACATAATTTTGGGTATCTTGCCCTTTGCTAGAGAAATGCTACGTCTAGGAA 813
Query 727 CT-CAGGTGGTGCTGGCTGCTAACGAGCTGCCAG-CTATCAACGATGTAACATATACCGA 784
| ||||| || ||||||||||| ||||| || | |||||||||||||||| |||| |||
Sbjct 814 -TGCAGGTTGTACTGGCTGCTAATGAGCTTCC-GTCTATCAACGATGTAACTTATATCGA 871
Query 785 GCTTACAGATAT-TGTGTCGCAGTTGAAGGATGGAAATGGCCAATTGATAGGTGTTGATA 843
|||| |||| || | |||| || |||| |||| |||||| |||||||| ||||||||||
Sbjct 872 GCTTGCAGAGATCT-TGTCTAAGCTGAATGATGAAAATGGACAATTGATGGGTGTTGATA 930
Query 844 CTTCAAAGCTTCTGATTGCAAATTCAGGGAATGATTTAGCGGTTATCGATCTCT-CAAGA 902
| ||||| ||||| |||||||||||||||||||| ||| ||||||| ||||| | |||||
Sbjct 931 CCTCAAATCTTCTTATTGCAAATTCAGGGAATGACTTACCGGTTATTGATCT-TGCAAGA 989
Query 903 GTATCACATGAGCTTGCTTACCTTTC-ATCTGATGCAGACTTAGTCATCCTAGAAGGCAT 961
|||||||| ||| |||| ||||| || | | ||||||||||| |||||| ||||||||||
Sbjct 990 GTATCACAGGAGGTTGCGTACCTCTCAAGC-GATGCAGACTTGGTCATCTTAGAAGGCAT 1048
Query 962 GGGTCGTGGGATCGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCTCTCAAGATCGG 1021
||| ||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1049 GGGCCGTGGAATAGAGACAAACCTTTATGCTCAGTTCAAGTGTGATTCCCTCAAGATCGG 1108
Query 1022 AATGGTGAAGCATGTTGAAGTAGCACAGTTTCTCGGAGGACGACTTTACGACTGTGTCTT 1081
||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |
Sbjct 1109 AATGGTGAAGCATCCAGAAGTAGCACAGTTTCTCGGAGGACGGCTTTATGACTGTGTCAT 1168
Query 1082 TAAATACAATGAAGTTCAGAGTTAAT-ACATTTCA 1115
||||||||||||||||||| ||||| | ||||||
Sbjct 1169 CAAATACAATGAAGTTCAGATTTAATTATATTTCA 1203
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55220599500
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5