BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931623
Length=1305
Score E
Sequences producing significant alignments: (Bits) Value
AT2G17630.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent t... 2052 0.0
AT4G35630.1 | Symbols: PSAT | phosphoserine aminotransferase | ... 1269 0.0
> AT2G17630.1 | Symbols: | Pyridoxal phosphate (PLP)-dependent
transferases superfamily protein | chr2:7666585-7668065 FORWARD
LENGTH=1481
Length=1481
Score = 2052 bits (1111), Expect = 0.0
Identities = 1246/1311 (95%), Gaps = 9/1311 (1%)
Strand=Plus/Plus
Query 3 TTCCTCAAGATCAACGATAATGGCGGCGTCAACGAACTCATTCCTCATCGGAAACCAAAC 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34 TTCCTCAAGATCAACGATAATGGCGGCGTCAACGAACTCATTCCTCATCGGAAACCAAAC 93
Query 63 CCAAATCCCTTCCCTGAAACCCAAATCAATTTCCCAATCCTTTATCCACTTCACCAAACC 122
|||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 94 CCAAATCCCTTCTTTGAAACCCAAATCAATATCCCAATCCTTTATCCACTTCACTAAACC 153
Query 123 TAACACCATCAACCTCACCACCAGAACCACATCCATTTCAATTCGAT--G----CGCTTC 176
||||||||||||||||||||| |||||| |||| ||||||| |||| | ||||||
Sbjct 154 CAACACCATCAACCTCACCACCCGAACCAAATCCGTTTCAATCCGATGCGCTTCCGCTTC 213
Query 177 AACCACCGTAGAATCCGAGCAACGAGTCTTCAATTTCGCCGCCGGTCCAGCCGCATTACC 236
||||||||| | ||||||||| |||||| ||||||||||||| |||||||||||||||||
Sbjct 214 AACCACCGTCGGATCCGAGCAGCGAGTCATCAATTTCGCCGCAGGTCCAGCCGCATTACC 273
Query 237 GGAAAACGTCCTCCTCAAAGCTCAATCAGATCTCTATAACTGGCGTGGATCTGGTATGAG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 274 GGAAAACGTCCTCCTCAAAGCTCAATCAGATCTCTATAACTGGCGTGGATCTGGTATGAG 333
Query 297 TGTCATGGAGATGAGTCACCGTGGTAAAGAGTTTCTCTCAATCATACAAAAAGCTGAATC 356
||| |||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct 334 TGTTATGGAGATGAGTCATCGCGGTAAAGAGTTTCTCTCAATCATTCAAAAAGCTGAATC 393
Query 357 TGATCTCCGTCAGCTTCTCGAGATTCCATCGGAATATTCCGTTTTGTTCTTACAAGGCGG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 394 TGATCTCCGTCAGCTTCTCGAGATTCCATCGGAATATTCCGTTTTGTTCTTACAAGGTGG 453
Query 417 TGCCACTACTCAATTCGCTGCTTTACCTCTCAATCTCTGCAAATCTGATGATTCTGTTGA 476
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 454 TGCCACTACTCAATTCGCTGCTTTACCTCTCAATCTCTGTAAATCTGATGATTCCGTTGA 513
Query 477 TTACGTTGTTACTGGATCTTGGGGAGATAAAGCTTTTAAGGAAGCGAAGAAATATTGTAA 536
|||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 514 TTACATTGTTACTGGATCTTGGGGAGATAAAGCTTTTAAGGAAGCTAAGAAATATTGTAA 573
Query 537 CCCTAAAGTGATTTGGTCTGGTAAATCTGAGAAATATACTAAAGTTCCATCCTTTGATGG 596
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 574 CCCTAAAGTGATTTGGTCTGGTAAATCTGAGAAATATACTAAAGTTCCAACCTTTGATGG 633
Query 597 ATTGGAGCAGACTTCGCACGCCAAGTATTTGCATATATGCGCCAATGAGACTATTCATGG 656
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 634 ATTGGAGCAGAGTTCGGACGCCAAGTATTTGCATATATGCGCCAATGAGACTATTCATGG 693
Query 657 TGTTGAATTCAAAGATTATCCTGTTGTTAAAAACCCTGATGGTATTCTTATTGCTGATAT 716
||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||
Sbjct 694 TGTTGAATTTAAAGATTATCCTCTTGTTGAAAACCCTGATGGTGTTCTTATTGCTGATAT 753
Query 717 GTCTTCCAATTTCTGTTCGAAGCCGGTGGATGTATCGAAATTCGGTGTGATTTACGCTGG 776
|||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 754 GTCTTCGAATTTCTGTTCTAAGCCGGTGGATGTATCGAAGTTCGGTGTGATTTACGCTGG 813
Query 777 TGCGCAGAAGAATGTTGGTCCTTCTGGTGTCACCATTGTGATAATTCGAAAGGATTTGAT 836
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 814 TGCTCAGAAGAATGTTGGTCCTTCTGGTGTCACCATTGTGATCATTCGAAAGGATTTGAT 873
Query 837 TGGGAACGCTAGAGATATTACTCCGGTGATGCTTGATTACAAGATTCATGATGAGAACAG 896
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 874 TGGGAATGCTAGAGATATAACTCCGGTGATGCTTGATTACAAGATTCATGATGAGAACAG 933
Query 897 TTCGTTGTATAACACGCCACCGTGTTTCGGGATTTACATGTGTGGTCTTGTGTTTGATGA 956
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 934 CTCGTTGTATAACACGCCACCGTGTTTCGGGATTTATATGTGTGGTCTTGTGTTTGATGA 993
Query 957 TTTGTTGGAGCAAGGTGGGTTGAAGGAAGTGGAGAAGAAGAATCAGAGGAAAGCT-ATGT 1015
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||| | ||
Sbjct 994 TTTGTTGGAGCAAGGTGGTTTGAAGGAAGTGGAGAAGAAGAACCAGAGGAAAGCTGA-GT 1052
Query 1016 TGTTGTACAATGCAATTGATGAGAGTAGAGGTTTTTTCAGGTGTCCTGTTGAGAAATCTG 1075
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1053 TGTTGTACAATGCGATTGATGAGAGTAGAGGGTTTTTCAGGTGTCCTGTTGAGAAGTCTG 1112
Query 1076 TGAGGTCTTTGATGAATGTTCCTTTTACGTTGGAGAAATCGGAATTGGAAGCTGAGTTTA 1135
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1113 TGAGGTCTTTGATGAATGTTCCTTTTACGTTGGAGAAATCGGAGTTGGAAGCTGAGTTTA 1172
Query 1136 TTAAAGAAGCTGCTAAGGAGAAGATGGTGCAGCTCAAGGGACATAGATCAGTGGGAGGTA 1195
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1173 TTAAAGAAGCTGCTAAGGAGAAGATGGTGCAGCTTAAGGGACATAGATCAGTGGGAGGTA 1232
Query 1196 TGAGAGCTTCTATTTACAATGCAATGCCGTTGGCCGGCGTTGAGAAGCTAGTTGCTTTCA 1255
|||||||||||||||||||||| ||||| ||||| || || || ||||| ||||||||||
Sbjct 1233 TGAGAGCTTCTATTTACAATGCGATGCCATTGGCTGGTGTCGAAAAGCTTGTTGCTTTCA 1292
Query 1256 TGAAAGATTTTCAGGCACGGCATGCTTGATTCTTTTT-GCTTTCTGGTCAT 1305
||||||||||||||||| ||||||||||||||||||| | ||||| |||||
Sbjct 1293 TGAAAGATTTTCAGGCAAGGCATGCTTGATTCTTTTTTGTTTTCTAGTCAT 1343
> AT4G35630.1 | Symbols: PSAT | phosphoserine aminotransferase
| chr4:16904059-16905722 FORWARD LENGTH=1664
Length=1664
Score = 1269 bits (687), Expect = 0.0
Identities = 965/1097 (88%), Gaps = 28/1097 (3%)
Strand=Plus/Plus
Query 197 AACGAGTCTTCAATTTCGCCGCCGGTCCAGCCGCATTACCGGAAAACGTCCTCCTCAAAG 256
|||| |||||||| ||||| || ||||||||| | || || || ||||| ||||| ||||
Sbjct 358 AACGTGTCTTCAACTTCGCGGCGGGTCCAGCCACTTTGCCTGAGAACGTTCTCCTAAAAG 417
Query 257 CTCAATCAGATCTCTATAACTGGCGTGGATCTGGTATGAGTGTCATGGAGATGAGTCACC 316
|||| | ||||| || ||||||||||||||||| |||||||| |||||||||||||||
Sbjct 418 CTCAGGCGGATCTATACAACTGGCGTGGATCTGGCATGAGTGTGATGGAGATGAGTCACA 477
Query 317 GTGGTAAAGAGTTTCTCTCAATCATACAAAAAGCTGAATCTGATCTCCGTCAGCTTCTCG 376
| || |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||
Sbjct 478 GAGGCAAAGAGTTTCTCTCGATTATACAAAAAGCTGAATCGGATCTTCGTCAGCTTCTCG 537
Query 377 AGATTCCATC-GGAATATTCCGTTTTGTTCTTACAAGGCGGTGCCACTACTCAATTCGCT 435
||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 538 AGATTCC-TCAGGAATATTCCGTTTTGTTCTTACAAGGTGGTGCCACTACTCAATTCGCT 596
Query 436 GCTTTACCTCTCAATCTCTGCAAATCTGATGATTCTGTTGATTACGTTGTTACTGGATCT 495
|||||||||||||||||||||||||| |||||| | || |||| |||||||||||| ||
Sbjct 597 GCTTTACCTCTCAATCTCTGCAAATCGGATGATACAGTCGATTTCGTTGTTACTGGTTCG 656
Query 496 TGGGGAGATAAAGCTTTTAAGGAAGCGAAGAAATATTGTAACCCTAAAGTGATTTGGTCT 555
||||| ||||||||| | |||||||||||||| ||||| || |||| ||||||||||||
Sbjct 657 TGGGGTGATAAAGCTGTCAAGGAAGCGAAGAAGTATTGCAAGACTAATGTGATTTGGTCT 716
Query 556 GGTAAATCTGAGAAATATACTAAA-GTTCCATCCTTTGATGGA-TTGGAGCAGACTTCGC 613
|| |||||||||||||| || ||| |||||||| ||||| ||| |||||||| ||| ||
Sbjct 717 GGGAAATCTGAGAAATACAC-AAAGGTTCCATCTTTTGA-GGAGTTGGAGCAAACTCCGG 774
Query 614 ACGCCAAGTATTTGCATATATGCGCCAATGAGACTATTCATGGTGTTGAATTCAAAGATT 673
|||| |||||||||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 775 ACGCTAAGTATTTGCATATATGCGCCAATGAGACTATTCATGGAGTTGAGTTTAAAGATT 834
Query 674 ATCCTGTTGTTAAAAACCCTGATGGTATTCTT-ATTGCTGATATGTCTTCCAATTTCTGT 732
| |||||| |||||| || || ||||| |||||||||||||||| || ||||||
Sbjct 835 ACCCTGTTCCTAAAAA---TG--GG--TTCTTGGTTGCTGATATGTCTTCTAACTTCTGT 887
Query 733 TCGAAGCCGGTGGATGTATCGAAATTCGGTGTGATTTACGCTGGTGCGCAGAAGAATGTT 792
||||| || || |||||||| || || ||||||||||||| |||||| |||||||| |||
Sbjct 888 TCGAAACCTGTTGATGTATCTAAGTTTGGTGTGATTTACGGTGGTGCACAGAAGAACGTT 947
Query 793 GGTCCTTCTGGTGTCACCATTGTGATAATTCG-AAAGGATTTGATTGGGAACGCT-AGAG 850
||||| ||||||||||| |||||||| ||||| ||| |||||||||||||| ||| | ||
Sbjct 948 GGTCCATCTGGTGTCACAATTGTGATCATTCGTAAA-GATTTGATTGGGAATGCTCA-AG 1005
Query 851 ATATTACTCCGGTGATGCTTGATTACAAGATTCATGATGAGAACAGTTCGTTGTATAACA 910
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1006 ATATTACTCCTGTGATGCTTGATTACAAGATTCATGATGAGAATAGTTCGTTGTACAACA 1065
Query 911 CGCCACCGTG-TTTCGGGATTTACATGTGTGGTCTTGTGTTTGATGATTTGTTGGAGCAA 969
|||| || || ||| ||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 1066 CGCCTCCTTGCTTT-GGGATTTACATGTGTGGTCTTGTGTTTGAAGATCTGTTGGAGCAA 1124
Query 970 GGTGGGTTGAAGGAAGTGGAGAAGAAGAATCAGAGGAAAGCT-ATGTTG-TTGTACAATG 1027
||||| ||||| ||||||||||||||||| |||||||||||| || ||| || |||||||
Sbjct 1125 GGTGGATTGAAAGAAGTGGAGAAGAAGAACCAGAGGAAAGCTGAT-TTGCTT-TACAATG 1182
Query 1028 CAATTGATGAGAGTAGA-GGTTTTTTCAGGTGTCCTGTTGAGAAATCTGTGAGGTCTTTG 1086
| ||||| || || | | || |||||||| ||||||||||||||||| |||||||| |||
Sbjct 1183 CTATTGAAGAAAGCA-ATGGCTTTTTCAGATGTCCTGTTGAGAAATCAGTGAGGTCGTTG 1241
Query 1087 ATGAATGTTCCTTTTACGTTGGAGAAATCGGAATTGGAAGCTGAGTTTATTAAAGAAGCT 1146
|||||||| ||||| || |||||||| || |||||||||||||||||||| || ||||||
Sbjct 1242 ATGAATGTGCCTTTCACATTGGAGAAGTCTGAATTGGAAGCTGAGTTTATCAAGGAAGCT 1301
Query 1147 GCTAAGGAGAAGATGGTGCAGCTCAAGGGACATAGATCAGTGGGAGGTATGAGAGCTTCT 1206
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1302 GCTAAAGAGAAGATGGTGCAGCTCAAAGGACATAGATCAGTGGGAGGTATGAGAGCTTCT 1361
Query 1207 ATTTACAATGCAATGCCGTTGGCCGGCGTTGAGAAGCTAGTTGCTTTCATGAAAGATTTT 1266
||||||||||||||||| ||||| || ||||| ||||| ||||||||||||||||||||
Sbjct 1362 ATTTACAATGCAATGCCTTTGGCTGGTGTTGAAAAGCTTGTTGCTTTCATGAAAGATTTC 1421
Query 1267 CAGGC-ACGGCATGCTT 1282
||||| | | |||||||
Sbjct 1422 CAGGCTAAG-CATGCTT 1437
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64206497055
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5