BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931672 Length=379 Score E Sequences producing significant alignments: (Bits) Value AT2G18010.1 | Symbols: | SAUR-like auxin-responsive protein fa... 527 3e-149 > AT2G18010.1 | Symbols: | SAUR-like auxin-responsive protein family | chr2:7833902-7834240 FORWARD LENGTH=339 Length=339 Score = 527 bits (285), Expect = 3e-149 Identities = 322/340 (95%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 21 ATGGCAATAAAGAGATCGAGCAAAGCAACGTCGTCTCAAGCAGCATCTATTAAGCAAATG 80 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 1 ATGGCAATAAAGAGATCGAGCAAAGCGACGTCGTCTCAAGCAGCATCTATCAAGCAAATA 60 Query 81 GTAAAAAGATGCTCGAGTCTAAGAAAGATGAAGAACGTGAATGGTTGCTATTATAACCAA 140 ||||| |||||||||||||||||||||||||||||||| |||||||| || ||||||||| Sbjct 61 GTAAAGAGATGCTCGAGTCTAAGAAAGATGAAGAACGTAAATGGTTGTTACTATAACCAA 120 Query 141 GAAGATGATCTTCCTCAAGACGTGCCAAAAGGTCATTTTCCCGTTTACGTGGGACCGAAC 200 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 121 GAAGATGATCTTCCTCAAGACGTGCCAAAAGGTCATTTTCCGGTTTACGTGGGACCGAAC 180 Query 201 CGAAGTCGGTACATCGTTCCCATCTCGTGGCTCGACCACTCTGAGTTTCAAACGTTGCTC 260 |||||||||||||||||||| ||||| |||||| | ||||| ||||| ||||| |||||| Sbjct 181 CGAAGTCGGTACATCGTTCCTATCTCATGGCTCCATCACTCCGAGTTCCAAACATTGCTC 240 Query 261 CGACTAGCTGAGGAAGAGTTTGGGTTTGACCATGATATGGGTCTAACCATTCCTTGTGAT 320 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGACTAGCTGAGGAAGAATTTGGGTTTGACCATGATATGGGTCTAACCATTCCTTGTGAT 300 Query 321 GAAGTCTTCTTCAGGTCTCTTATCTCCGA-GTTTAGATAA 359 ||||||||||||||||||||||||||| | |||||||||| Sbjct 301 GAAGTCTTCTTCAGGTCTCTTATCTCC-ATGTTTAGATAA 339 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17845050895 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5