BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg931688

Length=273
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G18080.1 | Symbols: EDA2 | Serine carboxypeptidase S28 famil...   263    7e-70


> AT2G18080.1 | Symbols: EDA2 | Serine carboxypeptidase S28 family 
protein | chr2:7857198-7859715 FORWARD LENGTH=1470
Length=1470

 Score =  263 bits (142),  Expect = 7e-70
 Identities = 169/182 (93%), Gaps = 2/182 (1%)
 Strand=Plus/Plus

Query  21   ATGTCGTTGGAGCTCGGCTTTATTCTGATCACCACTTTCACTGCGATTGTGTCATGTTT-  79
            |||||||| ||| |||||||||||||||||| || |||||||||||||||||||| ||| 
Sbjct  1    ATGTCGTTAGAGTTCGGCTTTATTCTGATCAACATTTTCACTGCGATTGTGTCAT-TTTC  59

Query  80   GACTTTGTCTCATGCCTTATTGCATCCTAGTAGCGTGTCTCATAATGTCTCGAGAAGCAG  139
             ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
Sbjct  60   AACTTTGTCTCATGCCTTATTGCATCCTAGTAGCGTTTCTCATAATGTCTCCAGAAGCCG  119

Query  140  CTATTACTTGACTACCAATGAACTATGGTTTAATCAAACCCTAGATCATGACTCTCCTAA  199
            ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  120  CTATTACATGACGACCAATGAACTATGGTTTAATCAAACCCTAGATCATGAATCTCCTAA  179

Query  200  TG  201
            ||
Sbjct  180  TG  181



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 12516669501


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5