BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931706 Length=337 Score E Sequences producing significant alignments: (Bits) Value AT2G18190.1 | Symbols: | P-loop containing nucleoside triphosp... 396 8e-110 AT2G18193.1 | Symbols: | P-loop containing nucleoside triphosp... 278 3e-74 > AT2G18190.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:7914305-7915872 REVERSE LENGTH=1485 Length=1485 Score = 396 bits (214), Expect = 8e-110 Identities = 268/293 (91%), Gaps = 7/293 (2%) Strand=Plus/Plus Query 24 ATGTTTCCTTC---ATCCAATTTCTCTTTCTCACCATCGTCGCTGTTCT-CAGCGTACGC 79 ||||||||||| ||||||| ||||||| ||||||||||||||||| | |||||||||| Sbjct 1 ATGTTTCCTTCAATATCCAATATCTCTTTATCACCATCGTCGCTGTT-TACAGCGTACGC 59 Query 80 ATCCTTAACCGGATTCTTGATGCTCTTTAGATCGTTGTTCAATGAT-ATCGTACCAGAGA 138 |||||||||||||||||||||||||||||||| ||||||||||| | ||||| |||| Sbjct 60 GTCCTTAACCGGATTCTTGATGCTCTTTAGATCACTGTTCAATGATGA-AGTACCGGAGA 118 Query 139 GGCTCCGATCATACATCACCGACTTACTCAACCGGTTCTTGACTCCGAAATCAAAGAATT 198 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 119 GGCTCCGATCATACATCACCGACTTACTCAACCGGTTTTTCACTCCGAAATCAAAGAATT 178 Query 199 TGACTATGGTTATCGACGAGATGATCGGATATAAGAGGAACCAAGTTTTTGACGCGGCGG 258 |||||||||||||||||||||| ||||||| ||||||||||||||| || |||||||| | Sbjct 179 TGACTATGGTTATCGACGAGATCATCGGATTTAAGAGGAACCAAGTGTTCGACGCGGCAG 238 Query 259 AGATGTACCTCCGGAACAAAATCGGACCAGAGACAGCACGTTTTCGAGTAGGT 311 || ||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct 239 AGGTGTACCTCCGGAACAAAATCGGACCCGAGACAGCCCGTTTACGAGTAGGT 291 > AT2G18193.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:7917505-7919277 REVERSE LENGTH=1697 Length=1697 Score = 278 bits (150), Expect = 3e-74 Identities = 246/292 (84%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 24 ATGTTTCCTTCATCCA-ATTTCTCTTTCTCACCATCGTCGCTGTTCTCAGCGTACGCATC 82 ||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| Sbjct 94 ATGTTTCCTTCAT-CAGATTTCTCTTTCTCACCGTCGTCGCTGTTCTCAGCGTACGCATC 152 Query 83 CTTAACCGGATTCTTGATGCTCTTTAGATCGTTGTTCAATGATATCGTACCAGAGAGGCT 142 |||||||||||||||||||||||||||||| || || ||||| ||||||| |||| ||| Sbjct 153 TTTAACCGGATTCTTGATGCTCTTTAGATCGATGCTCCATGATTTCGTACCGGAGAAGCT 212 Query 143 CCGATCATACATCACC-GACTTACTCAACCGGTTCTTGACTCCGAAATCAAAGAATTTGA 201 ||||| ||| || || | ||||||| ||||||| || ||||||||||||||| || | | Sbjct 213 TCGATCTTACTTCTCCAG-CTTACTCGACCGGTTTTTCACTCCGAAATCAAAGTATCTCA 271 Query 202 CTATGGTTATCGACGAGATGATCGGATAT-AAGAGGAACCAAGTTTTTGACGCGGCGGAG 260 || || | |||||||||| |||||| | || |||| ||||| || |||||||||||| Sbjct 272 CTGTGATCATCGACGAGAACTTCGGAT-TGAACCGGAATCAAGTCTTCGACGCGGCGGAG 330 Query 261 ATGTACCTCCGGAACAAAATCGGACCAGAGACAGCA-CGTTTTCGAGTAGGT 311 ||||| ||| ||| ||| |||||||| || |||| | || || ||||| ||| Sbjct 331 ATGTATCTCAGGAGCAAGATCGGACCGGAAACAG-AGCGGTTGCGAGTTGGT 381 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15733805437 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5