BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931733 Length=599 Score E Sequences producing significant alignments: (Bits) Value AT2G18390.1 | Symbols: TTN5, HAL, ARL2, ATARLC1 | ADP-ribosylat... 963 0.0 > AT2G18390.1 | Symbols: TTN5, HAL, ARL2, ATARLC1 | ADP-ribosylation factor family protein | chr2:7988165-7989525 FORWARD LENGTH=879 Length=879 Score = 963 bits (521), Expect = 0.0 Identities = 570/594 (96%), Gaps = 1/594 (0%) Strand=Plus/Plus Query 1 GAAGCTCTGTTGTGTG-GAAAATGGGACTGTTAAGCATAATCCGGAAGATCAAGAAGAAA 59 |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 150 GAAGCTCTCTTGTATGAAAAAATGGGACTGTTAAGCATAATCCGGAAGATCAAGAAGAAA 209 Query 60 GAGAAGGAGATGCGAATTCTTATGGTTGGACTTGATAATTCTGGGAAGACGACGATTGTT 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 210 GAGAAGGAGATGCGTATTCTTATGGTTGGACTTGATAATTCTGGGAAGACGACGATTGTT 269 Query 120 CTGAAGATAAACGGAGAAGACACAAGTGTGATTAGTCCAACACTTGGATTCAACATCAAA 179 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 270 CTGAAAATAAACGGAGAAGACACAAGTGTGATTAGTCCAACTCTTGGATTCAACATCAAA 329 Query 180 ACCATTGTTTACCAAAAGTATACGCTAAATATATGGGATGTTGGTGGGCAAAAGACTATA 239 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 330 ACCATTATCTACCAAAAGTATACGCTAAATATATGGGATGTTGGTGGGCAAAAGACTATA 389 Query 240 AGATCGTATTGGAGGAATTACTTTGAGCAGACTGATGGTTTGGTTTGGGTGGTTGATAGT 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 390 AGATCGTATTGGAGGAATTACTTTGAGCAGACTGATGGTTTGGTTTGGGTGGTTGATAGT 449 Query 300 TCTGATCTTAGGAGGTTAGATGACTGTAAGATGGAACTTGACAATCTCTTGAAGGAAGAG 359 ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct 450 TCTGATCTTAGGAGGTTAGATGATTGCAAGATGGAACTTGACAATCTCTTGAAAGAAGAG 509 Query 360 AGGCTAGCTGGGTCATCTTTGCTGATACTAGCAAATAAACAGGATATTCAAGGTGCACTT 419 ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 510 AGGCTAGCTGGTTCATCTTTGCTGATACTAGCAAATAAGCAGGATATTCAAGGTGCACTA 569 Query 420 ACTCCTGAAGAAATTGGCAAAGTGTTAAACTTAGAGTCCATGGATAAAAGCCGGCACTGG 479 || ||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 570 ACACCTGATGAAATTGGCAAGGTGCTAAACTTAGAGTCCATGGATAAAAGCCGGCACTGG 629 Query 480 AAAATCGTGGGTTGCAGCGCATACACAGGTCAAGGTTTGTTGGAAGGATTCGATTGGTTG 539 || || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 630 AAGATAGTGGGTTGCAGCGCATACACGGGTGAAGGTTTGTTGGAAGGATTCGATTGGTTG 689 Query 540 GTTCAAGACATTGCCTCCAGGATTTACATGCTTGACTAATCAACTACTGCATTG 593 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 690 GTTCAAGACATTGCCTCCAGGATTTACATGCTTGACTAATCGACTACTGCATTG 743 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28834400378 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5