BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931792
Length=1090
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16220.1 | Symbols: | F-box and associated interaction doma... 824 0.0
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 647 0.0
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 499 2e-140
AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 431 7e-120
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 398 7e-110
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 346 3e-94
AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 58.4 1e-07
> AT2G16220.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7030155-7031378 REVERSE LENGTH=1224
Length=1224
Score = 824 bits (446), Expect = 0.0
Identities = 803/970 (83%), Gaps = 45/970 (5%)
Strand=Plus/Plus
Query 116 ATTTCATGTGAAGTTCTCACCAGACAATTTACGGATCAATCATTATTATAACCTAAGATA 175
||||||| ||||||| || ||| ||||| |||| ||| ||||| || ||| || ||||||
Sbjct 258 ATTTCATATGAAGTTATCTCCAAACAATCTACGAATCTATCATGATAATACCCCAAGATA 317
Query 176 TTTTTCAATTGGCTACGCCTCTGGCTTGATCTATATCTATGGTGATCGACACCAGGCTAG 235
|||||||||||| ||||||||||||||||||||| | |||||||||||| || ||||||
Sbjct 318 TTTTTCAATTGGTTACGCCTCTGGCTTGATCTATTTATATGGTGATCGATACGAGGCTAC 377
Query 236 ACCTCTGATATGTAACCCCAACACAGGACGGTATGCAATCTTACCTTATAG-G-TATACC 293
|||||||||||||||||||||||||||| ||||| | ||||||||| | || | |||||
Sbjct 378 ACCTCTGATATGTAACCCCAACACAGGAAGGTATACGATCTTACCT-A-AGTGCTATACT 435
Query 294 TACAGAAAGGCGTATAGCTTTTTCGGGTTTGAACCGATTGACAAGCAATACAAGGTATTG 353
|| |||||||||| |||||||||||||||||| || ||||||||||| ||||||| ||||
Sbjct 436 TATAGAAAGGCGTTTAGCTTTTTCGGGTTTGACCCAATTGACAAGCAGTACAAGGCATTG 495
Query 354 TCCATGG-CTTATCCATGTGGTCCTGGTCAT-GATAAAGTTCTTACATTTGGAGCTGGAG 411
|||||| || |||||| |||||||||||| | |||| ||||||| ||||||| ||| |
Sbjct 496 TCCATGATCT-ATCCATCTGGTCCTGGTCACAG-TAAAATTCTTACTTTTGGAGATGGGG 553
Query 412 ATATGACGTGGAGAAGGATAAAATGTTCCT-TGAGG-CATGATGCTTATAGTGAAGGGGT 469
|||||| |||| || |||||||| | | | | | |||||| ||| ||| ||||| |
Sbjct 554 ATATGAATTGGAAAAAGATAAAATAT-CGTGT-ACTACATGATATTTACAGTCAAGGGAT 611
Query 470 ATGCATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGTTATAATGATGGTCA 529
|||||||||||| |||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct 612 ATGCATCAATGGTGTTTTGTATTACTTAGGTGACACGTCAGATTGGGATAATGAT---CA 668
Query 530 TGATGTAACGTCTCGTTATGTGATAGTTTGCTTTGATCTTAGG-TCTGAAAAGTT-CACC 587
||||||||||||| || ||||| |||||||||||||| ||| | || |||| ||| ||||
Sbjct 669 TGATGTAACGTCTGGTAATGTGTTAGTTTGCTTTGAT-TTAAGATCCGAAA-GTTTCACC 726
Query 588 TTTATTGGCGTAGAAAGGTCTTGTGGATTGATAAACTATAAGGGTAAATTAGCTGTGATT 647
||||||||| ||||| | | || |||||||||||||||||| ||||||||||| |||
Sbjct 727 TTTATTGGCTTAGAATG-TG--GTCAATTGATAAACTATAAGGGCAAATTAGCTGTAATT 783
Query 648 TTTTGGGAGGAT-T--ATGACGACTTTTATTCG-GAGGATGGCGAC-GCCGAGTTGCGTG 702
|||||||| ||| | |||| || | | | || |||| | | | ||| ||| ||
Sbjct 784 TTTTGGGATGATGTGGATGATGA-TGATGTGAAAGATGATGCC-ATTGATGAGATGCATG 841
Query 703 TGTGGGTTTTAGAGGACGTTGAGAAACATGAATGGTCGAAATATGCCTACACTTGGACCG 762
|||||||| ||||||| || |||||| | |||||||||||||||||||||||||||||||
Sbjct 842 TGTGGGTTCTAGAGGATGTCGAGAAAAAGGAATGGTCGAAATATGCCTACACTTGGACCG 901
Query 763 ATGG-TAAATTCTTCCGT-CGTCAGGTTTCCATGGTTGGAGTGACCACTTCGGGTGATAT 820
| || |||||| | |||| | |||||||||| |||||||| |||| |||||||||| ||
Sbjct 902 A-GGATAAATTATACCGTTC-TCAGGTTTCCGTGGTTGGAATGACTGCTTCGGGTGAAAT 959
Query 821 AGTGTTTTCGATGTGCAAGTATACATTTGAAGAACCGTTTTATGTTTTTTACTTGAATCC 880
||||||||||||| |||||||||||| |||| ||||||||||||||| ||||| |||||
Sbjct 960 AGTGTTTTCGATGCGCAAGTATACATCTGAACAACCGTTTTATGTTTACTACTTCAATCC 1019
Query 881 CGAAAGGAAGACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGTGTTTAAGGAAAC 940
||||||||| | ||||| ||||||||||||||||||||||| ||| ||||| |||
Sbjct 1020 CGAAAGGAACAATCTCCGACGTGTTGAAATCCAAGGTTTTG---AAGCGTTTACT-AAAT 1075
Query 941 TTG-TAGC-GTTTGCACCTTTGTAAACCACGTACAGAATAGTAATGTTAACCATTTAAAG 998
||| || | |||| |||||||||| | |||||| || || ||||||| || |||||||
Sbjct 1076 TTGGTA-CAGTTTACACCTTTGTAGATCACGTAGAGGATCTTAATGTTTACAATTTAAAA 1134
Query 999 CTACTCCA-GTCAGAGCATCCTCCATTGGTGGAGCCAGAATATTATGGACAATCAGAGTC 1057
| | | || ||||| |||||||||| |||| ||||||||||| ||| | | ||||| ||
Sbjct 1135 C-ATTTCAAGTCAGTCCATCCTCCATCGGTGCAGCCAGAATATGATG-A-A-TCAGATTC 1190
Query 1058 AGATTCAGAA 1067
||| ||||||
Sbjct 1191 AGAATCAGAA 1200
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 647 bits (350), Expect = 0.0
Identities = 493/561 (88%), Gaps = 13/561 (2%)
Strand=Plus/Plus
Query 116 ATTTCATGTGAAG-TTCTCACCAGACAATTTACGGATCAATCATTATTATAACCTAAGAT 174
|||||||||| || ||||| ||||||||| ||| |||| |||||||||| |||||| ||
Sbjct 288 ATTTCATGTG-AGATTCTCTCCAGACAATCTACTGATCTGTCATTATTATGACCTAAAAT 346
Query 175 ATTTTTCAATTGGCTACGCCTCTGGCTTGATCTATATCTATGGTGATCGACACCAGGCTA 234
||||||||||||| || |||| |||||||||||||||||||||| ||||| || |||||
Sbjct 347 ATTTTTCAATTGGTTATGCCTTTGGCTTGATCTATATCTATGGTAATCGAGGCCGGGCTA 406
Query 235 GACCTCTGATATGTAACCCCAAC-ACAGGACGGTATGCAATCTTACCTTATAGGTATACC 293
||||||| |||||||||||| || |||||||||||||| ||||||||| || |||||||
Sbjct 407 GACCTCTAATATGTAACCCC-ACTACAGGACGGTATGCCATCTTACCTAATCGGTATACT 465
Query 294 TACAGAAAGGCGTATAGCTTTTTCGGGTTTGAACCGATTGACAAGCAATACAAGGTATTG 353
||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||
Sbjct 466 TACAGAAAGGCGTTTAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGCATTG 525
Query 354 TCCATGGCTTATCCATGTGGTCCTGGTCATGA-TAAAGTTCTTACATTTGGAGCTGGAGA 412
||||||| |||||||| ||||||||||||| | || |||| |||||||||||||||||||
Sbjct 526 TCCATGGTTTATCCATCTGGTCCTGGTCAT-AGTAGAGTTATTACATTTGGAGCTGGAGA 584
Query 413 TATGACGTGGAGAAGGATAAAATGTTCCTTGAGGCATGATGCTT-ATAGTGAAGGGGTAT 471
| ||| ||||||||||||||||||||| ||| | |||||| || | |||||||||||||
Sbjct 585 TCTGAAGTGGAGAAGGATAAAATGTTCATTGCGACATGAT-ATTAAGAGTGAAGGGGTAT 643
Query 472 GCATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGTTA-TAATG--A-TGGT 527
| ||||||||||||||||||||||||||||||||||||||||| | | | | ||||
Sbjct 644 GTATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGG-AGTCGCGTTAATGGT 702
Query 528 CATGATGTAACGTCTCGTTATGTGATAGTTTGCTTTGATCTTAGGTCTGAAAAGTTCACC 587
|| | ||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||||
Sbjct 703 AATCACGTAACGTCTGGTTATATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCACC 762
Query 588 TTTATTGGCGTAGAAAGGTCTTGTGGATTGATAAACTATAAGGGTAAATTAGCTGTGATT 647
||||||| |||| |||||| |||| ||||||||||||| ||||| |||||||||||||||
Sbjct 763 TTTATTGACGTAAAAAGGTTTTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATT 822
Query 648 TTTTGGGAGGATTATGACGAC 668
| |||||||||| ||| ||||
Sbjct 823 TATTGGGAGGATGATGTCGAC 843
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 499 bits (270), Expect = 2e-140
Identities = 485/582 (83%), Gaps = 41/582 (7%)
Strand=Plus/Plus
Query 106 CAGCCGCAT-CATTTCATGTGAAGTTCTCACCAGACAA-TT--TACGGATCAATCATTAT 161
||||||| | |||||||||||||||||| |||||||| || ||| |||||||||| |
Sbjct 233 CAGCCGC-TGAATTTCATGTGAAGTTCTCTCCAGACAAGTTAATACCAATCAATCATTCT 291
Query 162 TATAACCTAAGATATTTTTCAATTGGCTACGCCTCTGGCTTGATCTATATCTATGGTGAT 221
|| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 292 TACGACCCAAGATATTTTTCAATTGGCTACGCCTCTGGCTTGATATATATCTATGGTGAT 351
Query 222 CGACACCAGGCTAGACCTCTGATATGTAACCCCAACACAGGACGGTATGCAATCTTACCT 281
||| || |||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 352 CGATACGTGGCTAGACCTCTAATATGTAACCCCAACACAGGACGGTATGTGATCTTACCT 411
Query 282 TATAGGTATACCTACAGAAAGGCGTATAGCTTTTTCGGGTTTGAACCGATTGACAAGCAA 341
|| ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 412 AATCGGTATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGATTGGCAAGCAA 471
Query 342 TACAAGGTATTGTCCATGGCTTATCCATGTGGTCCTGGTCATGATAAAGTTCTTACATTT 401
||||||| ||||||||| |||||||||| || |||||||| | ||||| | ||||||||
Sbjct 472 TACAAGGCATTGTCCATTGCTTATCCATCTGATCCTGGTCGTCATAAAATACTTACATTA 531
Query 402 GGAGCTGGAGATATGACGTGGAGAAGGATAAAATGTTCCTTGAGGCATGA--TGCTTAT- 458
|||| ||||||| |||| ||||||| ||| |||||| || | | || || || | ||
Sbjct 532 GGAGATGGAGATCTGACATGGAGAAAGATCAAATGTCCCGT-AC-CACGACCTGGT-ATT 588
Query 459 A-G--TGAAGGGGTATGCATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGT 515
| | ||| ||| |||||||||||||||||||||||| ||||| ||| | | |
Sbjct 589 AAGGGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTAGCTGA---G----A--G- 638
Query 516 TATAATGATGGTCATGATGTAACGTCTCG-TTATGTGATAGTTTGCTTTGATCTTAGGTC 574
| ||||| | | | | | | |||| | |||||||||||||||||||||| |||||||
Sbjct 639 -A-AATGA-G--C-T-A-G-A--GTCT-GATTATGTGATAGTTTGCTTTGATGTTAGGTC 686
Query 575 TGA-AAAGTTCACCTTTATTGGCGTAGAAAGG-TCTTGTGGATTGATAAACTATAAGGGT 632
||| ||| ||||| | ||||| |||||| ||| | |||| ||||||||||||| |||||
Sbjct 687 TGAGAAA-TTCACATATATTGACGTAGAGAGGAT-TTGTCGATTGATAAACTACAAGGGC 744
Query 633 AAATTAGCTGTGATTTTTTGGGAGGATTATGACGACTTTTAT 674
||||||||| |||||| |||||||||| ||| |||| |||||
Sbjct 745 AAATTAGCTATGATTTATTGGGAGGATGATGTCGACATTTAT 786
> AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744
FORWARD LENGTH=1275
Length=1275
Score = 431 bits (233), Expect = 7e-120
Identities = 453/558 (81%), Gaps = 20/558 (4%)
Strand=Plus/Plus
Query 116 ATTTCATGTGAAGTTCTCACCAGACAATTTACGGATCAATCATTATTA-TAACCTAAGAT 174
|||||||||||||||| | ||| ||||| | || ||| ||| || || | | | | |||
Sbjct 270 ATTTCATGTGAAGTTCCCTCCAAACAATATGCGCATCGGTCA-TAATAGTGATCGACGAT 328
Query 175 ATTTTTCAAT-TGGCTACGCCTCTGGCTTGATCTATATCTATGGTGA-TCGACACCAGGC 232
||||||| || ||| ||| ||||||| ||||||||| | |||||||| ||| | | | |
Sbjct 329 ATTTTTC-ATATGGTTACACCTCTGGTTTGATCTATTTATATGGTGATTCGTC-CGACGA 386
Query 233 TAGACCTCTGATATGTAACCCCAACACAGGACG-GTATGCAATCTTACCTTATAGGTATA 291
|||| || |||||||||||||| |||||||| | ||||||||||||||||||| | | |
Sbjct 387 TAGATCTGTGATATGTAACCCCTACACAGGA-GAGTATGCAATCTTACCTTATTTGCA-A 444
Query 292 C-CTACAGAAAGGCGTATAGCTTTTTCGG-GTTTGAACCGATTGACAAGCAATACAAGGT 349
| ||||||||| ||||||||||||| || ||||||||||||||| ||||||| |||| |
Sbjct 445 CGTTACAGAAAGACGTATAGCTTTTT-GGTGTTTGAACCGATTGAGAAGCAATTCAAGAT 503
Query 350 ATTGTCCATGGCTTATCCATGTGGTCCTGGTCATGATAAAGTTCTTACATTTGGAGCTGG 409
||||| ||||||||||| || |||| | || || ||||| | |||||| | ||| ||||
Sbjct 504 ATTGTTCATGGCTTATCTATCTGGTGATCGTGATCATAAAATCCTTACAGTAGGAACTGG 563
Query 410 AGATATGACGTGGAGAAGGATAAAATGTTCCTTGAGGCATGATGCTTAT-AGTGAAGGGG 468
| |||||| |||||||| |||| |||||||||||| |||| || | ||||||||||
Sbjct 564 AAATATGAAGTGGAGAACCATAAGATGTTCCTTGAGATATGA-AATTGTGAGTGAAGGGG 622
Query 469 TATGCATCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGTTATAATGATGGTC 528
||| ||| |||||||| |||||||||||||| || ||||| | ||| ||||| | | |
Sbjct 623 TATCCATTAATGGGGTATTGTATTACTTAGGCGAAACGTCCGCTTGGGATAATAAAGATT 682
Query 529 ATGATGTAACGTCTCG-TTATGTGATAGTTTGCTTTGATCTTAGGTCTGAAAAGTTCACC 587
||||| ||| || | | ||||| |||||||||||||||| ||||||||||||| ||||
Sbjct 683 ATGATTTAAAGTAT-GATTATGCGATAGTTTGCTTTGATATTAGGTCTGAAAAATTCA-T 740
Query 588 TTTATTGGCG-TAGAAAGGTCTTGTGGATTGATAAACTATAAGGGTAAATTAGCTGTGAT 646
||| || | | ||||||||| |||| |||||||||||||||||||||||||||| || ||
Sbjct 741 TTTTTTTGAGATAGAAAGGTTTTGTAGATTGATAAACTATAAGGGTAAATTAGCGGTAAT 800
Query 647 TT-TTTGGGAGGATTATG 663
|| ||| | ||||| |||
Sbjct 801 TTATTTCG-AGGATGATG 817
Score = 224 bits (121), Expect = 1e-57
Identities = 283/358 (79%), Gaps = 23/358 (6%)
Strand=Plus/Plus
Query 694 AGTTGCGTGTGTGGGTTTTAGAGGACGTTGAGAAACATGAATGGTCGAAATATGCCTACA 753
||||| |||||||||| ||||||| || |||||||| ||||||| ||||||||||||||
Sbjct 878 AGTTGAATGTGTGGGTTCTAGAGGATGTAGAGAAACAGGAATGGTAGAAATATGCCTACA 937
Query 754 CTTGGACCGATGGTAAATTC-TTC--CGTCGTCAGGTTTCCATGGTTGGAGTGAC--C-A 807
|||||||||||| || |||| ||| |||||| |||||||| | | | | ||| |
Sbjct 938 CTTGGACCGATGATATATTCTTTCGTCGTCGTGAGGTTTCCGTTGCTCCAACGACTGCTG 997
Query 808 CTTCGGGTGATATAGTGTTTTCGATGTGCAAGTATACAT-TTGAAGAACCGTTTTATGTT 866
||| |||||| ||||| ||||||||||| ||||||| | || | |||| |||||||||
Sbjct 998 CTTGGGGTGACATAGTCTTTTCGATGTGTGAGTATAC-TCCTGGACAACCATTTTATGTT 1056
Query 867 TTTTACTTGAATCCCGAAAGGAAG-ACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGA 925
|| ||||| |||||||||| | || |||||||||||||||||||||||||||||||||||
Sbjct 1057 TTCTACTTCAATCCCGAAAAG-AGCACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGA 1115
Query 926 AGTGTTTAAGGAAACTTGTAGCGTTTGCACCTTTGTAAACCACGTACA-GAATAGTAATG 984
|| | | ||||||||||| |||||||||| || ||||| | || | |||||
Sbjct 1116 AG-GCGT--------TTGTAGCGTTTACACCTTTGTAGACGACGTAGAAGA-TCTTAATG 1165
Query 985 TTAACCATTTAAAGCTACTCCAGTCAGAGCA-TCCTCCATTGGTGGAGCCAGAATATT 1041
|||| ||||||| ||||| || || || | ||||||| | | || ||||| |||
Sbjct 1166 TTAAGGATTTAAAAATACTCAAGCCATC-CAATGCTCCATTTGAGAAGACAGAAGATT 1222
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 398 bits (215), Expect = 7e-110
Identities = 302/343 (88%), Gaps = 10/343 (3%)
Strand=Plus/Plus
Query 693 GAGTTGCGTGTGTGGGTTTTAGAGGACGTTGAGAAACATG-AATGGTCGAAATATGCCTA 751
|||||||||||||||||| ||||||| ||| ||||||| | |||||||||||||||||||
Sbjct 1052 GAGTTGCGTGTGTGGGTTCTAGAGGATGTTAAGAAACA-GCAATGGTCGAAATATGCCTA 1110
Query 752 CACTTGGACCGATGGTAAATTCTTCCGTCGTCAG-GTTTCCATGGTTGGAGTGACCACTT 810
|||||||||||||| || |||||||||||||| | |||||||| | ||||| ||| |||
Sbjct 1111 CACTTGGACCGATGATAGATTCTTCCGTCGTC-GTGTTTCCATCGCTGGAGGGACTGCTT 1169
Query 811 CGGGTGATATAGTGTTTTCGATG-TGCAAGTATACATTTGAAG-AACCGTTTTATGTTTT 868
||||||| ||||||||||||||| | ||| |||||| | ||| ||||||||||||||||
Sbjct 1170 CGGGTGAAATAGTGTTTTCGATGCT-CAAATATACACCT-AAGCAACCGTTTTATGTTTT 1227
Query 869 TTACTTGAATCCCGAAAGGAAGACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGT 928
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1228 CTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGT 1287
Query 929 GTTTAAGGAAACTTGTAGCGTTTGCACCTTTGTAAACCACGTACAGAATAGTAATGTTAA 988
||| ||| |||||||||| |||||||||||||||||||||||| || || ||||||| |
Sbjct 1288 GTTAAAGAAAACTTGTAGAGTTTGCACCTTTGTAAACCACGTAGAGGATCTTAATGTTCA 1347
Query 989 CCA-TTTAAAGCTACTCCAGTCAGAGCATCCTCCATTGGTGGA 1030
| | |||||| | |||| |||||| ||||| |||||||||||
Sbjct 1348 CGACTTTAAA-CAACTCAAGTCAGTCCATCCCCCATTGGTGGA 1389
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 346 bits (187), Expect = 3e-94
Identities = 266/305 (87%), Gaps = 2/305 (1%)
Strand=Plus/Plus
Query 692 CGAGTTGCGTGTGTGGGTTTTAGAGGACGTTGAGAAACATGAATGGTCGAAATATGCCTA 751
|||||||| |||||||||| |||| || ||||||||||| |||||||| |||||||||||
Sbjct 1260 CGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAGAAACAGGAATGGTCTAAATATGCCTA 1319
Query 752 CACTTGGACCGATGGTAAATTCTTCCGTCGTCAGGTTTCCATGGTTGGAGTGACCACTTC 811
|||||||||||||| || |||||||| |||||| ||||||| | ||||| || ||||
Sbjct 1320 CACTTGGACCGATGATACATTCTTCCATCGTCACCTTTCCATTGCTGGAGCCACTGCTTC 1379
Query 812 GGGTGATATAGTGTTTTCGATGTGCAAGTATACATTTGAAGAACCGTTTTATGTTTTTTA 871
|||||| ||||||||||||||| ||||||| |||| | || |||| ||||||||||| ||
Sbjct 1380 GGGTGAAATAGTGTTTTCGATGCGCAAGTACACATCTAAACAACCATTTTATGTTTTCTA 1439
Query 872 CTTGAATCCCGAAAGGAAGACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGTGTT 931
||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1440 CTTCAATCCCGAAAGGAATACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGCGTT 1499
Query 932 TAAGGA-AACTTGTAGCGTTTGCACCTTTGTAAACCACGTACAGAATAGTAATGTTAACC 990
|| ||| ||||||||| ||| ||||||||||||||||| || || || | ||||||||
Sbjct 1500 TA-GGACAACTTGTAGTGTTCGCACCTTTGTAAACCACATAGAGGATCTTGATGTTAACG 1558
Query 991 ATTTA 995
|||||
Sbjct 1559 ATTTA 1563
Score = 329 bits (178), Expect = 3e-89
Identities = 281/329 (85%), Gaps = 13/329 (4%)
Strand=Plus/Plus
Query 106 CAGCCGCAT-CATTTCATGTGAAGTTCTCACCAGACAA-T--TTACGGATCAATCAT-TA 160
||||||| | |||||||||||||||||| |||||||| | ||| |||| ||| | |
Sbjct 695 CAGCCGC-TGAATTTCATGTGAAGTTCTCTCCAGACAAGTCAATACCGATCTATC-TGTC 752
Query 161 TTATA-ACCTAAGATATTTTTCAATTGGCTACGCCTCTGGCTTGATCTATATCTATGGTG 219
| | | ||| ||||||| ||||||||||||||||||||||||||||||||| |||| |||
Sbjct 753 TGA-AGACCCAAGATATGTTTCAATTGGCTACGCCTCTGGCTTGATCTATAACTATTGTG 811
Query 220 ATCGACACCAGGCTAGACCTCTGATATGTAACCCCAACACAGGACGGTATGCAATCTTAC 279
|||| || || ||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 812 GTCGATACGTGGGTAGACCTCTAATATGTAACCCCAACACAGGACGGTATGCGATCTTAC 871
Query 280 CTTATAGGTATACCTACAGAAAGGCGTATAGCTTTTTCGGGTTTGAACCGATTGACAAGC 339
| ||| | ||||| || |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 872 CATATCGTTATACTTATAGAAAGGCGTATAGTTTTTTCGGGTTTGACCCGATTGACAAGC 931
Query 340 AATACAAGGTATTGTCCATGGCTTATCCATG-TGGTCCTGGTCAT-GATAAAGTTCTTAC 397
||||||||| |||||| | ||||| | | ||||||||||| | | ||||||||||||
Sbjct 932 AATACAAGGCCTTGTCCCTTCCTTATGTA-GATGGTCCTGGTCGTAG-TAAAGTTCTTAC 989
Query 398 ATTTGGAGCTGGAGATATGACGTGGAGAA 426
|||||||||||||||| |||| |||||||
Sbjct 990 ATTTGGAGCTGGAGATCTGACATGGAGAA 1018
> AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972
REVERSE LENGTH=921
Length=921
Score = 58.4 bits (31), Expect = 1e-07
Identities = 40/44 (91%), Gaps = 1/44 (2%)
Strand=Plus/Plus
Query 887 GAAGACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGTGT 930
||| ||| |||||||||||||||||||||||||||| ||| |||
Sbjct 585 GAACACTATCCAACGTGTTGAAATCCAAGGTTTTGGAGAA-TGT 627
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53413379880
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5