BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931796 Length=236 Score E Sequences producing significant alignments: (Bits) Value AT2G16225.1 | Symbols: | Maternally expressed gene (MEG) famil... 220 3e-57 > AT2G16225.1 | Symbols: | Maternally expressed gene (MEG) family protein | chr2:7033940-7034317 REVERSE LENGTH=267 Length=267 Score = 220 bits (119), Expect = 3e-57 Identities = 169/193 (88%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 27 GGGTGGCGAGATACATAGATCAATGCTCAATATTACAATACCACCGTGTATCAAAACCTT 86 |||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 75 GGGTGGAGCTATACATAGATCGATGCTCAATATTACAATACCACCGTGTATCAAAACCTT 134 Query 87 TTGCAAGATA-T--CATTCAAAAAGGATCGTTGGTGTTGTTTCGGACCAAGAGCTAAGAA 143 ||||||| || | |||| ||||| || ||||||||||||||||||| ||||||||||| Sbjct 135 TTGCAAGGTACTAACATTTGAAAAGCATTGTTGGTGTTGTTTCGGACCGAGAGCTAAGAA 194 Query 144 GGAACGTTGTTGGAAAGAAGAAGATTATCCTAATGCCAAAGAGCTATGCTACGCCAGATG 203 ||| ||||||||| ||| || | |||||||| |||||||||||||||||||| | || Sbjct 195 AAAACTTTGTTGGAATGAACAAAAATATCCTAACGCCAAAGAGCTATGCTACGCTGGGTG 254 Query 204 TATAATAGAATAA 216 ||||||||||||| Sbjct 255 TATAATAGAATAA 267 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10656762788 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5