BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg931833
Length=2154
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine dec... 3240 0.0
AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxyl... 1674 0.0
> AT2G16500.1 | Symbols: ADC1, ARGDC1, ARGDC, SPE1 | arginine decarboxylase
1 | chr2:7150622-7153339 REVERSE LENGTH=2718
Length=2718
Score = 3240 bits (1754), Expect = 0.0
Identities = 2018/2141 (94%), Gaps = 36/2141 (2%)
Strand=Plus/Plus
Query 12 GAAGAAGAAGAAGATGCCTGCTCTAGCTTTTGTTGATACTCCCATCGATACTTTTTCCGG 71
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 423 GAAGAAGAAGAAGATGCCTGCTCTAGCTTTTGTTGATACTCCCATCGATACCTTTTCC-- 480
Query 72 TGATTACAGCGTCTTTACACCGTCGTCTG---CCACCGCCGCCATT----G-T--TG--A 119
| | | |||||||||||||||||| ||||||||| || | | || |
Sbjct 481 --AGT--A---TCTTTACACCGTCGTCTGTTTCCACCGCCGTTGTTGACGGTTCCTGCCA 533
Query 120 TTGGTCTCCGTCGCTCTCCTCCTCGT-TGTACCGTATCGACGGATGGGGAGCTCCGTATT 178
|||||||||||| ||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct 534 TTGGTCTCCGTCCCTCTCCTCCTC-TCTTTACCGTATCGACGGATGGGGAGCTCCGTATT 592
Query 179 TCGCCGCGAATACCTCCGGGAACATCTCTGTTCGTCCTCATGGCTCAAACACTTTACCTC 238
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCGCAGCGAATTCCTCCGGGAACATCTCTGTTCGTCCTCATGGCTCAAACACTTTACCTC 652
Query 239 ACCAAGACATCGATCTCATGAAGGTCGTGAAGAAAGTAACAGATCCGAGTGGTTTAGGAT 298
|||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||
Sbjct 653 ACCAAGACATCGATCTGATGAAAGTTGTGAAGAAAGTTACAGATCCGAGTGGTTTAGGAT 712
Query 299 TACAGCTTCCGCTTATCGTTCGTTTTCCTGATGTTCTGAAGAATCGTCTTGAGTGTCTTC 358
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 713 TACAGCTTCCGCTTATTGTTCGTTTCCCTGATGTTCTGAAGAATCGTCTTGAGTGTCTTC 772
Query 359 AATCATCGTTTGATTACGCGATTCAGAGTCAAGGCTATGGTTCACATTACCAAGGTGTGT 418
|||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct 773 AATCCGCGTTTGATTACGCGATTCAGAGTCAAGGATATGATTCTCATTACCAAGGTGTGT 832
Query 419 ACCCTGTGAAATGTAATCAAGATCGGTTTATTATCGAAGATATTGTCGAATTCGGAT-CG 477
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 833 ATCCTGTGAAATGTAATCAAGATCGGTTTATCATCGAAGATATTGTCGAATTCGGATCCG 892
Query 478 AGTTTTCGATTCGGATTAGAAGCTGGTTCGAAGCCTGAGATTCTTCTTGCTATGAGTTGT 537
||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 893 -GTTTTCGATTCGGTTTAGAAGCTGGTTCCAAGCCTGAGATTCTTCTTGCTATGAGTTGT 951
Query 538 TTGTGTAAAGGTAATCCTGAAGCTTTTCTTGTGTGTAATGGTTTTAAAGACTCTGAGTAT 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 952 TTGTGTAAAGGTAATCCTGAAGCTTTTCTTGTGTGTAATGGTTTTAAAGACTCTGAGTAT 1011
Query 598 ATCTCATTGGCTTTGTTTGGGAGGAAACTGGAATTGAATACTGTGATTGTTCTTGAGCAA 657
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1012 ATCTCATTGGCTTTGTTTGGGAGGAAACTTGAATTGAATACTGTTATTGTTCTTGAGCAA 1071
Query 658 GAAGAAGAGCTTGATTTGGTTATTGATTTGAGTCAGAAGATGAATGTTAGGCCTGTGATT 717
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1072 GAAGAAGAGCTTGATTTGGTTATTGATTTGAGCCAGAAGATGAATGTTAGGCCTGTTATT 1131
Query 718 GGGTTAAGAGCTAAGCTGAGAACGAAACATTCTGGTCATTTTGGTTCTACTTCTGGTGAG 777
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1132 GGGTTAAGAGCTAAGCTTAGAACTAAACATTCTGGTCATTTTGGTTCTACTTCTGGTGAG 1191
Query 778 AAAGGGAAGTTTGGTTTGACTACGATTCAGATTGTTCGTGTGGTGAGGAAGCTGAGTCAA 837
|| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1192 AAGGGGAAGTTTGGTTTGACTACGGTTCAGATTCTTCGTGTGGTGAGGAAGCTGAGTCAA 1251
Query 838 GTTGGTATGCTTGATTGTCTTCAGCTTCTGCATTTTCACATTGGTTCTCAGATTCCGTCC 897
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1252 GTTGGTATGCTTGATTGTCTCCAGCTTCTGCATTTTCACATTGGTTCACAGATTCCGTCC 1311
Query 898 ACGGCTTTG-TTGTCCGATGGTGTAGCTGAGGCTGCGCAGCTTTACTGTGAGCTTGTCCG 956
||||||||| || ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1312 ACGGCTTTGCTT-TCCGACGGTGTGGCTGAGGCTGCGCAGCTTTACTGTGAGCTTGTCCG 1370
Query 957 TCTTGGTGCTCATATGAAGGTGATTGATATTGGTGGTGGATTGGGGATTGATTACGACGG 1016
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1371 TCTTGGTGCTCATATGAAGGTGATTGATATTGGTGGTGGGTTGGGGATTGATTACGACGG 1430
Query 1017 GTCTAAATCGGGGGAGTCGGATCTCTCTGTTGCTTATAGTCTTGAGGAGTATGCTGCAGC 1076
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1431 GTCTAAATCGGGGGAGTCGGATCTCTCTGTTGCTTATAGTCTCGAGGAGTATGCTGCAGC 1490
Query 1077 TGTTGTGGCATCGGTTAGGTTTGTTTGTGATCAGAAATCTGTGAAGCATCCAGTGATATG 1136
||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| ||
Sbjct 1491 TGTTGTGGCTTCGGTTAGGTTTGTTTGTGATCAGAAGTCTGTGAAGCATCCGGTGATTTG 1550
Query 1137 CAGCGAGAGTGGTCGAGCCATTGTGTCTCATCACTCGGTGTTGATCTTTGAAGCTGTCTC 1196
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 CAGCGAGAGCGGTCGAGCCATTGTGTCTCATCACTCGGTGTTGATCTTTGAAGCTGTCTC 1610
Query 1197 AGCTGGTCAACAACATGAAACCCCAACTGATC-TAAAGTTTATGCTTGAAGGGTACTCGG 1255
|||||||||||||||||| ||||| ||||||| | | ||||||||||||||||||||| |
Sbjct 1611 AGCTGGTCAACAACATGAGACCCCTACTGATCATCA-GTTTATGCTTGAAGGGTACTCTG 1669
Query 1256 AGGAAGT-CAGAAATGATTACGAGAATCTTTATGGTGCTGCGATGCGTGGTGATCGTGAA 1314
||||||| | || ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1670 AGGAAGTTC-GAGGTGATTACGAGAATCTTTATGGTGCTGCTATGCGTGGTGATCGTGAA 1728
Query 1315 AGCTGCTTGCTTTATGTTGATCAGCTGAAGCAGAGATGTGTTGAAGGGTTCAAAGAAGGT 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1729 AGCTGCTTGCTTTATGTTGATCAGCTGAAGCAGAGATGTGTTGAAGGGTTCAAAGAAGGT 1788
Query 1375 TCCTTGAGCATTGAACAGTTAGCTGGTGTTGATGGGTTATGCGAGTGGGTGATTAAGGCG 1434
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1789 TCCTTGGGCATTGAACAGTTAGCTGGTGTTGATGGATTATGCGAGTGGGTGATTAAGGCG 1848
Query 1435 ATTGGCGCATCGGATCCGGTTCTTACTTACCATGTCAATCTATCGGTTTTCACTTCGATT 1494
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1849 ATTGGTGCATCGGATCCGGTTCTTACTTACCATGTCAATCTATCGGTTTTCACTTCGATT 1908
Query 1495 CCGGATTTCTGGGGGATTGATCAGCTGTTTCCTATAGTTCCAATCCATAAACTTGACCAA 1554
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1909 CCTGATTTCTGGGGGATTGATCAGCTGTTTCCTATTGTTCCAATCCATAAACTTGACCAA 1968
Query 1555 AGGCCTGTCGCGAGAGGGATCTTATCAGATTTGACTTGCGACAGCGACGGAAAGATCAAC 1614
||||||| |||||||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 1969 AGGCCTGCCGCGAGAGGGATCTTATCGGATTTGACGTGTGACAGCGACGGAAAGATCAAC 2028
Query 1615 AAGTTCATAGGCGGAGAATCGAGCTTGCCATTGCACGAGCTGGACAACAATGGCTGCAGC 1674
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2029 AAGTTCATAGGCGGAGAATCGAGCTTGCCATTGCACGAGATGGACAACAATGGCTGCAGC 2088
Query 1675 GGCGGGAGATACTATTTGGGAATGTTCCTAGGTGGAGCTTATGAAGAGGCTCTCGGTGGA 1734
|| ||| | ||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2089 GGTGGGCGGTACTATTTGGGAATGTTCCTAGGTGGAGCTTATGAGGAAGCTCTCGGTGGA 2148
Query 1735 GTCCACAATCTGTTCGGAGGACCAAGCGTGGTCCGCGTCTTGCAGAGTGATGGACCTCAC 1794
||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||
Sbjct 2149 GTCCACAATCTGTTCGGTGGACCAAGCGTGGTTCGCGTATTGCAGAGCGATGGACCTCAC 2208
Query 1795 GGATTCGCAGTGACCCATGCTGTGATGGGTCAATCCTCTGCGGATGTCCTCAGAGCAATG 1854
|||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 2209 GGATTCGCAGTGACCCGTGCTGTGATGGGCCAATCCTCTGCAGATGTCCTCAGAGCAATG 2268
Query 1855 CAGCATGAGCCTGAGCTCATGTTTCAGACTCTTAAACACCGAGCCGAGGAGCAGAGGAAC 1914
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2269 CAGCATGAGCCTGAGCTCATGTTTCAGACTCTTAAACACCGAGCCGAGGAGCCGAGGAAC 2328
Query 1915 AACAACAACAAAGCTGGTGGTGATAAGGGAAATGACAAACTAGTAGTCGCATCGTGTCTT 1974
||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||
Sbjct 2329 AACAACAACAAAGCTTGTGGTGATAAGGGGAACGACAAACTAGTAGTCGCATCGTGTCTT 2388
Query 1975 GCTC-GTTCATTCAACAACATGCCTTATCTTTCCATGGAAACGTCCACAAACGCTCTCAT 2033
||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2389 GCTAAGT-CATTCAACAACATGCCTTATCTTTCCATGGAAACGTCAACAAACGCTCTCAC 2447
Query 2034 CGCAGCGATCAATAACCTCGGCGTTTACTACCGCGATGAAGCTGCAGCTGGTGGCGGCGG 2093
||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 2448 CGCAGCGGTCAATAACCTTGGCGTTTACTACTGCGATGAAGCTGCAGCTGGTGGCGGCGG 2507
Query 2094 CGGCAGGGGCAAGGATGAGAAATGGTCTTATTTTGGTTGAT 2134
| |||| ||| |||||||| ||||||||||| |||||||
Sbjct 2508 CA--AGGG-CAAAGATGAGAATTGGTCTTATTTCGGTTGAT 2545
> AT4G34710.1 | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxylase
2 | chr4:16560062-16562969 REVERSE LENGTH=2908
Length=2908
Score = 1674 bits (906), Expect = 0.0
Identities = 1529/1824 (84%), Gaps = 66/1824 (4%)
Strand=Plus/Plus
Query 120 TTGGTCTCCGTCGCTCTCCTCCTCGT-TGTACCGTATCGACGGATGGGGAGCTCCGTATT 178
|||||||||||||||||| || || | | || || ||||| ||||||||||| || ||||
Sbjct 642 TTGGTCTCCGTCGCTCTCATCGTC-TCTCTATCGAATCGATGGATGGGGAGCCCCTTATT 700
Query 179 TCGCCGCGAATACCTCCGGGAACATCTCTGTTCGTCCTCATGGCTC-AAACACTTTACCT 237
|| || ||| | || || |||||||||||||||||||||||||| || ||||| |||
Sbjct 701 TCATAGCCAATTCGTCTGGTAACATCTCTGTTCGTCCTCATGGCTCTGAA-ACTTTGCCT 759
Query 238 CACCAAGACATCGATCT-CATGAAGGTCGTGAAGAAAGTAACAGATCCG--A-------G 287
||||||||||||||| | | | || |||| ||||| || || | |||| | |
Sbjct 760 CACCAAGACATCGATTTGC-TCAAAATCGTTAAGAAGGTGACGGGTCCGAAATCTTCCGG 818
Query 288 TGGTTTAGGATTACAGCTTCCGCTT-ATCGTTCGTTTTCCTGATGT-TCTGAAGAATCGT 345
|||||||||||| ||||||||| || ||||||||||| |||||||| | ||||||| |||
Sbjct 819 TGGTTTAGGATTGCAGCTTCCG-TTGATCGTTCGTTTCCCTGATGTGT-TGAAGAACCGT 876
Query 346 CTTGAGTGTCTTCAATCAT-CGTTTGATTACGCGATTCAGAGTCAAGGCTATGGTTCACA 404
|| |||||||||||||| | ||||||||||||||||| | |||||||| |||| ||| ||
Sbjct 877 CTCGAGTGTCTTCAATC-TGCGTTTGATTACGCGATTAAAAGTCAAGGATATGATTCTCA 935
Query 405 TTACCAAGGTGTGTACCCTGTGAAATGTAATCAAGATCGGTTTATTATCGAAGATATTGT 464
|||||||||||| || || ||||||||||| |||||||| || || | |||||||||||
Sbjct 936 TTACCAAGGTGTTTATCCGGTGAAATGTAACCAAGATCGATTCGTTGTTGAAGATATTGT 995
Query 465 CGAA-TTCGGATC-GAGTTTTCGATTCGGATTAGAAGCTGGTTCGAAGCCTGAGATTCTT 522
| || || ||||| | |||||||| ||||||||||||||||| || |||||||| |||
Sbjct 996 C-AAGTTTGGATCTTCG-TTTCGATTTGGATTAGAAGCTGGTTCTAAACCTGAGATCCTT 1053
Query 523 CTTGCTATGAGTTGTTTGTGTAAAGGTAATCCTGAAGCTTTTCTTGTGTGTAATGGTTTT 582
||||||||||| || ||||||||||||| ||||| || ||||||||||| ||||| ||
Sbjct 1054 CTTGCTATGAGCTGCTTGTGTAAAGGTAGCCCTGATGCCTTTCTTGTGTGCAATGGATTC 1113
Query 583 AAAGACT-CTGAGTATATCTCATTGGCTTTGTTTGGGAGGAAACTGGAATTGAATACTGT 641
||||| | |||||||||| ||||||||| || ||||||| ||||||| |||||||||||
Sbjct 1114 AAAGA-TGCTGAGTATATATCATTGGCTCTGCTTGGGAGAAAACTGGCGTTGAATACTGT 1172
Query 642 GATTGTTCTTGAGCAAGAAGAAGAGCTTGATTTGGTTATTGATTTGAGTCAGAAGATGAA 701
|||||| |||||||||||||||||||||||| |||||||||| |||| |||||||||||
Sbjct 1173 GATTGTGCTTGAGCAAGAAGAAGAGCTTGATCTGGTTATTGAGCTGAGCCAGAAGATGAA 1232
Query 702 TGTTAGGCCTGTGATTGGGTTAAGAGCTAAGCTGAGAACGAAACATTCTGGTCATTTTGG 761
||| |||||||| ||||||||||| ||||||||||| || || ||||| |||||||| ||
Sbjct 1233 TGTGAGGCCTGTCATTGGGTTAAGGGCTAAGCTGAGGACTAAGCATTCGGGTCATTTCGG 1292
Query 762 TTCTACTTCTGGTGAGAAAGGG-AAGTTTGGTTTGACTACGATTCAGATTGTTCGTGTGG 820
|| ||||||||||| |||||| || ||||| |||||||| | |||||||||||||||||
Sbjct 1293 ATCAACTTCTGGTGA-AAAGGGTAAATTTGGATTGACTACTACTCAGATTGTTCGTGTGG 1351
Query 821 TGAGGAAGCTGAGTCAAGT-TGGTATGCTTGATTGTCTTCAGCTTCTGCATTTTCACATT 879
||||||||||| ||||| | |||||||||||||||||| ||||||||||||||||| |||
Sbjct 1352 TGAGGAAGCTGCGTCAA-TCTGGTATGCTTGATTGTCTCCAGCTTCTGCATTTTCATATT 1410
Query 880 GGTTCTCAGATTCCGTCCACGGCTTTGTTGTCCGATGGTGTAGCTGAGGCTGCGCAGCTT 939
||||| ||||||||||| || | ||| | || |||||||| || |||||||| ||||||
Sbjct 1411 GGTTCACAGATTCCGTCGACTTCGTTGCTCTCTGATGGTGTCGCCGAGGCTGCTCAGCTT 1470
Query 940 TACTGTGAGCTTGTCCGTCTTGGTGCTCATATGAAGGTGATTGATATTGGTGGTGGATTG 999
|||||||| ||||| ||||||||||| |||||||| || |||||||| |||||||| |||
Sbjct 1471 TACTGTGAACTTGTGCGTCTTGGTGCACATATGAAAGTTATTGATATCGGTGGTGGTTTG 1530
Query 1000 GGGATTGATTACGACGGGTCTAAATCGGGGGAGTCGGATCTCTCTGTTGCTTATAGTCTT 1059
|||||||| ||||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 1531 GGGATTGACTACGACGGGTCTAAATCTGGAGAATCGGATCTCTCTGTTGCTTATAGTCTC 1590
Query 1060 GAGGAGTATGCTGCAGCTGTTGTGGCATCGGTTAGGTTTGTTTGTGATCAGAAATCTGTG 1119
||||||||||||| ||||||||| || || ||| || |||| ||||| | || || |||
Sbjct 1591 GAGGAGTATGCTGAAGCTGTTGTAGCTTCTGTTCGGGTTGTGTGTGACCGGAGCTCAGTG 1650
Query 1120 AAGCATCCAGTGATATGCAGCGAGAGTGGTCGAGCCATTGTGTCTCATCACTCGGTGTTG 1179
|| ||||| |||||||||||||| || ||| |||| || || |||||||| || ||| ||
Sbjct 1651 AAACATCCGGTGATATGCAGCGAAAGCGGTAGAGCGATAGTCTCTCATCATTCTGTGCTG 1710
Query 1180 ATCTTTGAAGCTGTCTCAGCTGGTCAAC-AA-----CATGAA--A-C-CCCAACTGATCT 1229
|||||||||||||| ||||| | | ||| || ||| || | | ||| | ||| |
Sbjct 1711 ATCTTTGAAGCTGTTTCAGCAGATAAACCAATGGTTCATCAAGCAACTCCCGGC-GATAT 1769
Query 1230 AAAGTTTATGCTTGAAGGGTACTCGGAGGAAG-TC-AGAAATGATTACGAGAATCTTTAT 1287
|||| |||||||||| || | | |||||| || || | |||| ||| ||||||||
Sbjct 1770 TCAGTTCCTGCTTGAAGG-TAAT-G-AGGAAGCTCGAGCCA--ATTATGAGGATCTTTAT 1824
Query 1288 GGTGCTGCGATGCGTGGTGATCGTGAAAGCTGC-TTGCTTTATGTTGATCAGCTGAAGCA 1346
| ||||| ||||||||| || | ||||||||| || |||||||| ||||||||||||||
Sbjct 1825 GCTGCTGTGATGCGTGGAGACCACGAAAGCTGCCTT-CTTTATGTCGATCAGCTGAAGCA 1883
Query 1347 GAGATGTGTTGAAGGGTTCAAAGAAGGT-TCCTTGAGCATTGAACAGTTAGCTGGTGTTG 1405
||| ||||||||||| |||||||||||| | |||||||| || ||||||||| |||||
Sbjct 1884 GAGGTGTGTTGAAGGTTTCAAAGAAGGTGTT-TTGAGCATCGAGCAGTTAGCTTCTGTTG 1942
Query 1406 ATGGGTTATGCGAGTGGGTGATT-AAGGCGATTGGCGCATCGGATCCGGTTCTTACTTAC 1464
|||| ||||||||||||||| || ||||| || ||||||||||||||||||| |||||||
Sbjct 1943 ATGGTTTATGCGAGTGGGTG-TTGAAGGCTATAGGCGCATCGGATCCGGTTCATACTTAC 2001
Query 1465 CATGTCAATCTATCGGTTTTCACTTCGATTCCGGATTTCTGGGGGATTGATCAGCTGTTT 1524
|| |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 2002 AATATCAATCTATCAGTTTTCACTTCGATTCCTGATCTCTGGGGGATTGATCAGCTGTTC 2061
Query 1525 CCTATAGTTCCAATCCATAAACTTGACCAAAGGCCTGTCGCGAGAGGGATC-TTATCAGA 1583
||||||||||| |||||||| || || |||||||| | || | || ||| || |||||
Sbjct 2062 CCTATAGTTCCTATCCATAAGCTCGATCAAAGGCCCGGGGCTCGCGGAATCCTT-TCAGA 2120
Query 1584 TTTGACTTGCGACAGCGACGGAAAGATCAACAAGTTCATAGGCGGAGAATCGAGCTTGCC 1643
||| || || || || ||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct 2121 TTTAACGTGTGATAGTGACGGGAAGATCAACAAGTTCATAGGCGGTGAATCCAGCTTGCC 2180
Query 1644 ATTGCACGAGCTGGACAACAATGGCTGCAGCGGCGGGAGATACTATTTGGGAATGTTCCT 1703
||||||||||||||||| |||||| || || || || |||| |||||| ||||||||
Sbjct 2181 GTTGCACGAGCTGGACAAGAATGGC---AGTGGAGGAAGGTACTTTTTGGGTATGTTCCT 2237
Query 1704 AGGTGGAGCTTATGAAGAGGCTCTCGGTGGAGTCCACAATCTGTTCGGAGGACCAAGCGT 1763
|| || ||||| || ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2238 TGGAGGGGCTTACGAGGAGGCTCTCGGTGGAGTCCACAATCTGTTTGGTGGACCAAGCGT 2297
Query 1764 GGTCCGCGTCTTGCAGAGTGATGGACCTCACGGATTCGCAGTGACCC-ATGCTGTGA-TG 1821
||||| |||| ||||| |||||||| ||| | || |||||||||| | || ||| ||
Sbjct 2298 TGTCCGGGTCTCCCAGAGCGATGGACCACACAGCTTTGCAGTGACCCGA-GCGGTGCCTG 2356
Query 1822 GGTCAATCCTCTGCGGATGTCCTCAGAGCAATGCAGCATGAGCCTGAGCTCATGTTTCAG 1881
| ||| ||||| |||||||| ||| ||||||||||||||||||| ||||| |||||||||
Sbjct 2357 G-TCAGTCCTCAGCGGATGTTCTCCGAGCAATGCAGCATGAGCCGGAGCTAATGTTTCAG 2415
Query 1882 ACTCTTAAA-CACCGAGCCGAGGA 1904
|| || ||| |||||||| |||||
Sbjct 2416 ACCCT-AAAGCACCGAGCAGAGGA 2438
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106826759760
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5