BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg931980 Length=359 Score E Sequences producing significant alignments: (Bits) Value AT2G20875.1 | Symbols: EPF1 | epidermal patterning factor 1 | c... 516 6e-146 > AT2G20875.1 | Symbols: EPF1 | epidermal patterning factor 1 | chr2:8983074-8983612 REVERSE LENGTH=453 Length=453 Score = 516 bits (279), Expect = 6e-146 Identities = 335/361 (93%), Gaps = 7/361 (2%) Strand=Plus/Plus Query 1 ACCACTTACGATAATATATCATGAAGtctcttcttctccttgcctttttcctctctttct 60 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14 ACCACTTGCGATAATATATCATGAAGTCTCTTCTTCTCCTTGCCTTTTTCCTCTCTTTCT 73 Query 61 tcttcggctctctcttGGCAAGGCATTTACCAACACCCTCCCATCCAAGTCATCATCATG 120 |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 74 TCTTTGGCTCTCTCTTGGCTAGGCATTTACCAACATCCTCCCATCCAAGTCATCATCATG 133 Query 121 TGGGAATGACCGGGACATTAATGAAGCGTCAGAGGAGGAGGCCGGACACGGTGCAAGTGG 180 | |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct 134 TAGGAATGACCGGGGCATT---GAAGCGTCAGAGGAGGAGGCCGGACACGGTGCAGGTGG 190 Query 181 CTGGGTCTAGGTTGCCAGACTGCTCACACGCGTGTGGCTCATGCTCCCCATGCAGACTTG 240 ||||||||||||||||||| |||||||||||||||||||| || || |||||| | |||| Sbjct 191 CTGGGTCTAGGTTGCCAGATTGCTCACACGCGTGTGGCTCGTGTTCTCCATGCCGTCTTG 250 Query 241 TGATGGTTAGCTTTGTGTGTGCATC-GCTCCAAGAGGCTGAGACTTGTCCAATGGCTTAC 299 ||||||||||||||||||||||||| | || |||||||||||||||||||||||||||| Sbjct 251 TGATGGTTAGCTTTGTGTGTGCATCCG-TCGAAGAGGCTGAGACTTGTCCAATGGCTTAT 309 Query 300 AAGTGCATGTGCAACAACAAGTCCTACCCCGTCCCATGATCAGCCT-TTCCTACACTTAT 358 || |||||||||||||| ||||||||||| ||||| |||||||||| ||| ||||||||| Sbjct 310 AAATGCATGTGCAACAATAAGTCCTACCCTGTCCCTTGATCAGCCTCTTC-TACACTTAT 368 Query 359 T 359 | Sbjct 369 T 369 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16839695915 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5