BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932060
Length=1293
Score E
Sequences producing significant alignments: (Bits) Value
AT2G21330.1 | Symbols: FBA1 | fructose-bisphosphate aldolase 1 ... 2152 0.0
AT4G38970.1 | Symbols: FBA2 | fructose-bisphosphate aldolase 2 ... 1110 0.0
> AT2G21330.1 | Symbols: FBA1 | fructose-bisphosphate aldolase
1 | chr2:9128151-9130240 REVERSE LENGTH=1553
Length=1553
Score = 2152 bits (1165), Expect = 0.0
Identities = 1243/1281 (97%), Gaps = 3/1281 (0%)
Strand=Plus/Plus
Query 13 TAGCAACAATGGCGTCAAGCACTGCCACTATGCTCAAAGCCTCACCGGTGAAATCTGATT 72
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 81 TAGCAACAATGGCGTCAAGCACTGCGACTATGCTCAAAGCCTCACCGGTGAAATCTGATT 140
Query 73 GGGTTAAGGGACAGAGTCTCCTCCTCCGTCGTCAACCTTCCTCTGTCTCAGCTATTCGCA 132
||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||
Sbjct 141 GGGTTAAGGGACAGAGTCTTCTCCT-C--CGTCAACCTTCCTCTGTCTCAGCTATTCGCA 197
Query 133 GCCACGTGGCACCTTCCTCTCTCACCGTCCGTGCCGCTTCTGCTTACGCCGACGAACTCG 192
||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||
Sbjct 198 GCCACGTGGCACCTTCCGCTCTCACCGTCCGAGCCGCTTCTGCTTACGCCGATGAGCTCG 257
Query 193 TCAAAACAGCTaaaaaaaTCGCGTCTCCGGGACACGGAATTATGGCGATGGATGAGTCAA 252
||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 258 TCAAAACCGCTAAAACAATCGCGTCTCCGGGACACGGAATTATGGCGATGGATGAGTCCA 317
Query 253 ACGCGACTTGTGGAAAGCGTTTGGCGTCCATTGGGCTAGAGAACACGGAGGCTAACCGTC 312
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 318 ACGCGACTTGTGGAAAGCGTTTGGCGTCAATTGGGCTAGAGAACACGGAGGCTAACCGTC 377
Query 313 AAGCTTACCGGACGTTGCTTGTGTCGGCTCCAGGACTGGGACAGTACATCTCCGGAGCTA 372
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 378 AAGCTTACAGGACGTTGCTTGTGTCGGCTCCAGGACTTGGACAGTACATCTCCGGAGCTA 437
Query 373 TCCTGTTCGAGGAGACTTTGTACCAATCCACCACCGACGGCAAGAAAATGGTTGATGTTC 432
||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||||
Sbjct 438 TCCTGTTCGAGGAGACTCTGTACCAATCCACCACTGATGGCAAGAAAATGGTTGATGTTC 497
Query 433 TCGTTGAGCAGAACATCGTCCCTGGCATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTG 492
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 498 TCGTCGAGCAGAACATCGTCCCTGGCATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTG 557
Query 493 GGTCTAACGACGAGTCATGGTGCCAAGGACTTGACGGTTTAGCCTCTCGTACCGCTGCTT 552
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 558 GGTCTTACGACGAGTCATGGTGCCAAGGACTTGACGGTTTAGCCTCTCGCACCGCTGCTT 617
Query 553 ACTACCAACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAATGGAC 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 618 ACTACCAACAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAATGGAC 677
Query 613 CCTCTGCTTTGGCTGTTAAAGAAGCAGCTTGGGGACTTGCTCGCTACGCTGCTATTTCTC 672
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 678 CCTCTGCTTTGGCTGTTAAAGAAGCAGCTTGGGGACTTGCTCGCTACGCAGCTATTTCTC 737
Query 673 AGGACAGCGGTCTGGTGCCGATTGTGGAGCCAGAGATTCTGTTGGACGGAGAACACGGCA 732
| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 738 AAGACAGCGGTCTGGTGCCGATTGTGGAGCCAGAGATTATGTTGGACGGAGAACACGGCA 797
Query 733 TTGACAGGACATACGAGGTTGCAGAGAAGGTTTGGGCTGAGGTCTTCTTCTACCTCGCTC 792
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 798 TTGACAGGACATACGACGTTGCAGAGAAGGTTTGGGCTGAGGTCTTCTTCTACCTCGCTC 857
Query 793 AGAACAACGTCCTGTTCGAAGGTATTCTCCTGAAGCCGAGCATGGTTACTCCAGGAGCTG 852
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 858 AGAACAACGTCATGTTCGAAGGTATTCTCCTGAAGCCAAGCATGGTTACTCCAGGAGCTG 917
Query 853 AGGCTACAGACAGAGCTACTCCCGAGCAGGTTGCTTCCTACACTCTCAAGCTCCTTCGCA 912
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 918 AGGCCACAGACAGAGCTACTCCTGAGCAGGTTGCTTCCTACACTCTCAAGCTCCTTCGCA 977
Query 913 ACAGAATCCCTCCCGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGGCAGTCCGAGTTGG 972
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 978 ACAGAATCCCTCCTGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGACAGTCCGAGTTGG 1037
Query 973 AGGCGACCTTGAACTTAAACGCAATGAACCAGGCACCGAACCCATGGCACGTGTCCTTCT 1032
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1038 AGGCGACCTTGAACTTGAACGCAATGAACCAGGCACCGAACCCATGGCACGTGTCCTTCT 1097
Query 1033 CCTATGCACGTGCCTTGCAGAACACTTGCTTGAAGACATGGGGAGGCAGGGAAGAGAACG 1092
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1098 CCTACGCACGTGCCTTGCAGAACACTTGCTTGAAGACATGGGGAGGCAAGGAAGAGAACG 1157
Query 1093 TGAAGGCGGCTCAGGACATTCTCTTGGCCAGAGCCAAAGCCAATTCGCTGGCTCAGCTCG 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1158 TGAAGGCGGCTCAGGACATTCTCTTGGCCAGAGCCAAAGCCAATTCGCTGGCTCAGCTCG 1217
Query 1153 GGAAATACACAGGAGAAGGCGAGTCCGAGGAAGCCAAGGAGGGTATGTTTGTAAAAGGCT 1212
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1218 GGAAATACACTGGAGAAGGCGAGTCTGAGGAAGCCAAGGAGGGTATGTTTGTAAAAGGCT 1277
Query 1213 ACACCTACTAAGCTATTTGTAATAATGGTTCCATAGATCAAAACTCAAAAACTTGAGCTT 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1278 ACACCTACTAAGCTATTTGTAATAATGGTTCCATAGATCAAAACTCAAAAACTTGAGCTT 1337
Query 1273 GATTCTGGTGTTTTGAGTTAT 1293
||||||||| ||||||||||
Sbjct 1338 GATTCTGGTCATTTGAGTTAT 1358
> AT4G38970.1 | Symbols: FBA2 | fructose-bisphosphate aldolase
2 | chr4:18163496-18165762 REVERSE LENGTH=1518
Length=1518
Score = 1110 bits (601), Expect = 0.0
Identities = 922/1079 (85%), Gaps = 14/1079 (1%)
Strand=Plus/Plus
Query 148 CCTCTCTCACCGTCCGTGCCGCTT-CTGCTTACGCCGACGAACTCGTCAAAACAGCTaaa 206
|||| ||||||||||||||||||| || | |||||||| || || || || ||||| |||
Sbjct 225 CCTCCCTCACCGTCCGTGCCGCTTCCT-CCTACGCCGATGAGCTTGTTAAGACAGCGAAA 283
Query 207 aaaaTCGCGTCTCCGGGACACGGAAT-TATGGCGATGGATGAGTCAAACGCGACTTG-TG 264
| || |||||||| |||| ||||| | |||||||||| ||||||||||||||||| |
Sbjct 284 ACTATTGCGTCTCCCGGACGTGGAATCT-TGGCGATGGACGAGTCAAACGCGACTTGCGG 342
Query 265 GAAAGCGTTTGGCGTCCATTGGGCTAGAGAACACGGAGGCTAACCGTCAAGCTTACCGGA 324
|||| ||||||| || || |||||||||||||| ||||| || |||||||||| |||||
Sbjct 343 GAAA-CGTTTGGATTCGATAGGGCTAGAGAACACTGAGGCAAATCGTCAAGCTTTCCGGA 401
Query 325 CGTTGCTTGTGTCGGCTCCAGGACTGGGACAGTACATCTCCGGAGCTATCCTGTTCGAGG 384
| ||||| || || || || ||||| ||||||||| ||||||| || || || || ||||
Sbjct 402 CTTTGCTGGTCTCTGCACCGGGACTCGGACAGTACGTCTCCGGCGCAATTCTATTTGAGG 461
Query 385 AGACTTTGTACCAATCCACCACCGACGGCAAGAAAATGGTTGATGTTCTCGTTGAGCAGA 444
||||| ||||||| || |||||||| |||||||||||||| || || ||||| |||||||
Sbjct 462 AGACTCTGTACCAGTCTACCACCGAAGGCAAGAAAATGGTCGACGTCCTCGTCGAGCAGA 521
Query 445 ACATCGTCCCTGGCATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTGGGTCTAACGACG 504
|||| |||||||| ||||||||||||||||||||||||||||||||||| || ||| | |
Sbjct 522 ACATTGTCCCTGGTATCAAAGTCGACAAGGGTTTGGTGCCACTTGTTGGATCCAACAATG 581
Query 505 AGTCATGGTGCCAAGGACTTGACGGTTTAGCCTCTCGTACCGCTGCTTACTACCAACAAG 564
||||||||||||||||||| || ||| || | ||||| || ||||||||||| ||||| |
Sbjct 582 AGTCATGGTGCCAAGGACTAGATGGTCTATCATCTCGAACTGCTGCTTACTATCAACAGG 641
Query 565 GTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATTCCAAATGGACCCTCTGCTTTGG 624
|||| ||||||||||||||||||||||| ||||||||||| || || || ||||| | |
Sbjct 642 GTGCGCGTTTCGCCAAATGGCGTACTGTCGTGAGCATTCCTAACGGTCCGTCTGCCCTCG 701
Query 625 CTGTTAAAGAAGCAGCTTGGGGACTTGCTCGCTACGCTGCTATTTCTCAGGACAGCGGTC 684
| || |||||||| |||||||| |||||||| |||||||| ||||| ||||||||||||
Sbjct 702 CCGTCAAAGAAGCTGCTTGGGGTCTTGCTCGATACGCTGCCATTTCACAGGACAGCGGTT 761
Query 685 TGGTGCCGATTGTGGAGCCAGAGATTCT-GTTGGACGGAGAACACGGCATTGACAGGACA 743
|||| |||||||| ||||||||||| || |||||| |||||||||| ||||||||| |||
Sbjct 762 TGGTTCCGATTGTTGAGCCAGAGAT-CTTGTTGGATGGAGAACACGACATTGACAGAACA 820
Query 744 TACGAGGTTGCAGAGAAGGTTTGGGCTGAGGTCTTCTTCTACCTCGCTCAGAACAACGTC 803
||||| || ||||||||||||||||||||||| ||||| ||||| ||||||||||| |||
Sbjct 821 TACGACGTAGCAGAGAAGGTTTGGGCTGAGGTTTTCTTTTACCTTGCTCAGAACAATGTC 880
Query 804 CTGTTCGAAGGTATTCTCCTGAAGCCGAGCATGGTTACTCCAGGAGCTGAGGCTACAGAC 863
|||| |||||||| ||||| || ||||||||||| ||||| ||||||||| ||| ||||
Sbjct 881 ATGTTTGAAGGTATCCTCCTAAAACCGAGCATGGTGACTCCCGGAGCTGAGTCTAAAGAC 940
Query 864 AGAGCTACTCCCGAGCAGGTTGCTTCCTACACTCTCAAGCTCCTTCGCAACAGAATCCCT 923
||||||||||| || || ||||| ||||||| ||||||||||| ||||||||| |||||
Sbjct 941 AGAGCTACTCCTGAACAAGTTGCCGCCTACACCCTCAAGCTCCTCCGCAACAGAGTCCCT 1000
Query 924 CCCGCTGTCCCCGGAATCATGTTCTTGTCTGGTGGGCAGTCCGAGTTGGAGGCGAC-CTT 982
||||| ||||||||||||||||| ||||| || || ||||| ||| ||||||| || ||
Sbjct 1001 CCCGCAGTCCCCGGAATCATGTTTTTGTCCGGAGGACAGTCGGAGGTGGAGGCAACACTC 1060
Query 983 GAACTTAAACGCAATGAACCAGGCACCGAACCCATGGCACGTGTCCTTCTCCTATGCACG 1042
||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1061 -AACTTGAACGCAATGAACCAGGCACCAAACCCATGGCACGTGTCCTTCTCCTACGCACG 1119
Query 1043 TGCCTTGCAGAACACTTG-CTTGAAGACATGGGGAGGCAGGGAAGAGAACGTGAAGGCGG 1101
||| |||||||||||||| || ||| |||||||| ||||| ||||||||||| || |
Sbjct 1120 TGCGTTGCAGAACACTTGTCT-GAAAACATGGGGCGGCAGACCCGAGAACGTGAACGCAG 1178
Query 1102 CTCAGGAC-ATTCTCTTGGCCAGAGCCAAAGCCAATTCGCTGGCTCAGCTCGGGAAATAC 1160
||||| || | |||||||||| | ||||| ||||||||| ||||||||||||| ||||||
Sbjct 1179 CTCAG-ACCACTCTCTTGGCCCGTGCCAAGGCCAATTCGTTGGCTCAGCTCGGAAAATAC 1237
Query 1161 ACAGGAGAAGGCGAGTCCGAGGAAGCCAAGGAGGGTATGTTTGTAAAAGGCTACACCTA 1219
|| || || || |||||||| || || |||||||| ||||| || ||||| ||||||||
Sbjct 1238 ACCGGTGAGGGTGAGTCCGAAGAGGCTAAGGAGGGCATGTTCGTCAAAGGGTACACCTA 1296
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63604090515
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5