BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932070
Length=3496
Score E
Sequences producing significant alignments: (Bits) Value
AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:915200... 2972 0.0
AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:229195... 2809 0.0
> AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:9152006-9156878
FORWARD LENGTH=4190
Length=4190
Score = 2972 bits (1609), Expect = 0.0
Identities = 1960/2126 (92%), Gaps = 37/2126 (2%)
Strand=Plus/Plus
Query 20 TATGTTGACCAAGTTCAAGACCAAGAGTAACAGAGTTAAAGGTCTGAGCTTT-CACCCTA 78
|||| ||||||||||| |||||||||||||| ||||||| |||||||| ||| |||||||
Sbjct 232 TATGCTGACCAAGTTCGAGACCAAGAGTAACCGAGTTAAGGGTCTGAG-TTTCCACCCTA 290
Query 79 AAAGACCATGGATTCTCGCCAGTTTACACAGTGGTGTGATCCAGCTCTGGGATTACCGTG 138
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 291 AACGACCATGGATTCTCGCGAGTTTACACAGTGGTGTGATCCAGCTCTGGGATTATCGTA 350
Query 139 TGGGTACCTTGATCGATAAG-TTTGACGGGCACCAAGGACCTGTTCGTGGTGTTCATTTT 197
||||||| |||||||| || ||||| | |||| |||||||||||||||||||||||||
Sbjct 351 TGGGTACTTTGATCGA-CAGATTTGATGAGCACGAAGGACCTGTTCGTGGTGTTCATTTC 409
Query 198 CAC-ACTTCACAGCCTCTATTCGTCTCTGGAGGGGATGATTGCAAGATAAAAGTTTGGAA 256
||| || ||||||||| |||||||||||||||||||||||| |||||| |||||||||||
Sbjct 410 CACAAC-TCACAGCCTTTATTCGTCTCTGGAGGGGATGATTACAAGATTAAAGTTTGGAA 468
Query 257 CTACAAAACACACTGGTGTCTTTTCACTCTTCTTGGACATCTTGATTATATCCGCACGGT 316
||||||||| ||| ||||||||||||||||||| || |||||||||||||||||||| ||
Sbjct 469 CTACAAAACTCACAGGTGTCTTTTCACTCTTCTCGGGCATCTTGATTATATCCGCACTGT 528
Query 317 TCAGTTTCATCACGAATACCCATGGATTCTGAGTGCCAGTGACGACCAAACTATCCGTAT 376
|| ||||| |||||| ||||||||||| ||||||| |||||||| || |||||||| ||
Sbjct 529 CCAATTTCACCACGAAAACCCATGGATTGTGAGTGCTAGTGACGATCAGACTATCCGCAT 588
Query 377 ATGGAACTGGCAATC-ACGGACTTGTGTCTCTGTCTTGGCTGCTCACAATCATTATGTTA 435
||||||||||| || | |||||||| | || || ||| ||| |||||||||||||||||
Sbjct 589 TTGGAACTGGCAGTCTA-GGACTTGTATTTCCGTGTTGACTGGTCACAATCATTATGTTA 647
Query 436 TGTGTGCTTCTTTCCACCCAAAAGATGACCTTGTTGTATCAGCTTC-CTTAGATCAGACT 494
|||||||||||||||| ||||| || || |||||||||||||| || | | |||||||||
Sbjct 648 TGTGTGCTTCTTTCCATCCAAAGGAAGATCTTGTTGTATCAGCATCAC-TGGATCAGACT 706
Query 495 GTTCGTGTTTGGGAAATTGGTGCTCTTAAGAAGAAGACTGTATCTCCTTCTGATGATATC 554
|| ||||||||||| ||||||||||||||||||||| | | ||||||| ||||||| ||
Sbjct 707 GTCCGTGTTTGGGACATTGGTGCTCTTAAGAAGAAGTCAGCATCTCCTGCTGATGACCTC 766
Query 555 ATGAG-GTTGGCTGAGATAAATAGTGATCTTTTT-GATAGTGTTGATGTC-ACAGTCAAA 611
||| | || | | |||| ||| |||||||||| || | ||||| | | | ||| ||
Sbjct 767 ATGCGATTTAG-TCAGATGAATTCTGATCTTTTTGGA-GGGGTTGACG-CTATAGTTAAG 823
Query 612 TACGTCCTTGAAGGTCATGAAAGAGGTGT-AATTTGGGCTGCTTTTCATCCCAAC-CTGC 669
|||||||||||||||||||| ||||| || || |||||| ||||||||||| || || |
Sbjct 824 TACGTCCTTGAAGGTCATGATAGAGGAGTCAA-CTGGGCTTCTTTTCATCCC-ACACTTC 881
Query 670 CTCTTATCGTCTCGGGTTCAGATGACCGCCAAGTAAAGCTGTGGCGTATGAATGAAACTA 729
|||| || ||||| ||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 882 CTCTCATTGTCTCTGGTGCCGATGACCGCCAAGTAAAGCTGTGGCGTATGAATGAAACTA 941
Query 730 AAGCTTGGGAGGTGGATACATTGCGAGGTCACATGAATAATGTTTCATCCGTTATGTTCC 789
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 942 AAGCTTGGGAGGTGGATACATTGCGAGGTCATATGAATAACGTTTCATCCGTTATGTTCC 1001
Query 790 ATGCAAAACAAGACATAATTGTATCAAACTCTGAGGATAAAAGCATCCGTGTCTGGGATG 849
|||||||||| ||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct 1002 ATGCAAAACAGGACATTATCGTGTCAAACTCTGAGGATAAAAGCATCCGTGTCTGGGATG 1061
Query 850 CTACCAAGCGAACTGGAATCCAAACTTTTCGCCGTGAACATGATCGATTCTGGAGTCTTG 909
||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||
Sbjct 1062 CTACCAAGCGAACTGGAATCCAAACTTTTCGTCGTGAGCATGACCGATTCTGGATTCTTG 1121
Query 910 CAGTTCACCCTGAGATTAATCTACTAGCAGCAGGACATGACAATGGTATGATTGTCTTCA 969
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 1122 CAGTTCACCCTGAGATTAATCTACTTGCAGCAGGACATGACAATGGTATGATTGTTTTCA 1181
Query 970 AACTTGAGAGAGAACGTCCTGCATTTGCTTTGAGTGGTGATTCATTATTCTATGCCAAGG 1029
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1182 AACTTGAGAGAGAACGTCCTGCATTTGCTTTGAGTGGTGATTCGTTATTCTATGCCAAAG 1241
Query 1030 ATAGATTTTTACGGTGCTATGAATATTCAACTCAAAAAGATTCCCAAGTTATTCCTATAC 1089
|||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 ATAGATTTCTGCGGTACTATGAATATTCAACTCAAAAAGATTCCCAAGTTATTCCTATAC 1301
Query 1090 GGAGTCCTGGTACCCCAAGCTTGAATCAAAGTCCTAGGACTTTATCGTACAGTCCAACAG 1149
|| ||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||
Sbjct 1302 GGCGTCCTGGTACCCCAAGCTTGAATCAAAGTCCGAGGACTTTATCCTACAGTCCGACAG 1361
Query 1150 AAAATGCAGTTCTGA-TCTGCTCAGATCTGGATGGTGGTTCTTACGAGTTGTACATCATA 1208
|||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 AAAATGCAGT-CTTAATCTGCTCAGATCTGGATGGTGGTTCTTACGAGTTGTACATCATA 1420
Query 1209 CCAAAAGACAG-------A--AGCGACGTTGTGCAAGATG-AAATGCGGGGGAAAGGTGG 1258
|| ||||| || | || || ||||| ||||||| ||| | |||||| ||| ||
Sbjct 1421 CCGAAAGATAGCGTTGGCAGGAGTGATGTTGTACAAGATGCAAA-GAGGGGGACAGGGGG 1479
Query 1259 TTCTGCGGTGTTCATTGCTCGAAATCGGTTTGCTGTTCTGGAGAAAAGCACCAGCCAGGT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1480 TTCTGCGGTGTTCATTGCTCGAAATCGGTTTGCTGTTCTGGAGAAAAGCACCAGCCAGGT 1539
Query 1319 GCTAGTGAAGAATCTAAAGAATGAGGTGGTTGAAAAGAGTTCTCTGCCTATTCCCGCAGA 1378
| ||||||||||||||||||||||||||||| ||||||||||| | ||||||||| ||||
Sbjct 1540 GTTAGTGAAGAATCTAAAGAATGAGGTGGTTAAAAAGAGTTCTTTACCTATTCCCACAGA 1599
Query 1379 CGCTATCTTTTATGCTGGGACTGGAAATTTGCTTTGTAGGTCTGAGGATAAAGTGGTTAT 1438
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1600 TGCTATCTTTTATGCTGGGACTGGAAATTTGCTTTGTAGATCTGAGGATAAAGTGGTTAT 1659
Query 1439 ATTTGACCTTCAACAAAGGCTTGTTCTTGGTGAGCTTCAGATACCGTTTCTTAGGTACGT 1498
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 1660 ATTTGACCTTCAACAAAGGCTTGTTCTTGGTGAGCTTCAGACACCGTTTGTTAGGTACGT 1719
Query 1499 TGTTTGGTCTAACGATATGGAGAGTGTTGCTTTGCTCGGCAAACATTA-TATCATTATTG 1557
||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||
Sbjct 1720 TGTTTGGTCTAACGATATGGAGAGTGTTGCTTTGCTCAGCAAACAT-ACTATCATTATTG 1778
Query 1558 CGAGCAAAAAACTTG-CTTTCCAGTGCATGCTTCATGAGAGAATACGTGTGAAAAGTGGA 1616
||||||||||||||| | | | |||||| ||||||||||| |||||||||||||||||||
Sbjct 1779 CGAGCAAAAAACTTGTCCTAC-AGTGCACGCTTCATGAGACAATACGTGTGAAAAGTGGA 1837
Query 1617 GCATGGGACGACAATGGTGTCTTCATTTACACTACTCTGAACCACATCAAGTATTGTCTT 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1838 GCATGGGACGACAATGGTGTCTTCATTTACACTACTCTGAACCACATCAAGTACTGTCTG 1897
Query 1677 CCTAATGGAGATAGTGGAATCATCAAAACCCTGGATGTCCCAATCTACATCACCAAGGTG 1736
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1898 CCTAATGGAGATAGTGGAATCATCAGAACCCTGGATGTCCCAATCTACATCACCAAGGTG 1957
Query 1737 TCTGGAAATACAATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCTATCACCATTAAT 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1958 TCTGGAAATACAATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCTATCACCATTAAT 2017
Query 1797 GCAACTGAATACATTTTCAAGCTTGCACTGCTGAGAAAGAGATATGATCATGTCATGAGC 1856
||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct 2018 GCAACCGAATACATTTTCAAGCTTGCACTACTGAGAAAGAAATATGATCATGTCATGAGC 2077
Query 1857 ATGATAAAGAACTCCCAGCTATGTGGACAGGCTATGATCGCTTATCTTCAGCAGAAAGGT 1916
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2078 ATGATAAAGAACTCCCAGCTATGTGGACAGGCTATGATCGCTTATCTTCAGCAGAAAGGA 2137
Query 1917 TTTCCTGAAGTTGCCCTCCACTTTGTTGAAGACGAGAGGATCCGATTCAACTTGGCTCTT 1976
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2138 TTTCCTGAAGTTGCCCTACACTTTGTTGAAGACGAGAGGATCCGATTCAACTTGGCTCTT 2197
Query 1977 GAAAGTGGCAACATCAGTGTAGCTGTTGCATCCGCTACAGAGATTAATGAGAAAGACCAC 2036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2198 GAAAGTGGCAACATCAGTGTAGCTGTTGCATCCGCTACAGAGATTAATGAGAAAGACCAC 2257
Query 2037 TGGTATAGACTCGGAGTGGAGGCTCTTCGTCAAGGAAATTCTAGAATTGTTGAGTTTGCG 2096
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2258 TGGTATAGACTCGGAGTGGAAGCTCTTCGTCAAGGAAATTCTAGAATTGTTGAGTTTGCG 2317
Query 2097 TACCAGCAGACAAAGAACTTTGAGAG 2122
||||||||||||||||||||||||||
Sbjct 2318 TACCAGCAGACAAAGAACTTTGAGAG 2343
Score = 1509 bits (817), Expect = 0.0
Identities = 951/1016 (94%), Gaps = 8/1016 (1%)
Strand=Plus/Plus
Query 2460 GACTTGGATCTTCCAACAGAG-TTAGACTCT-CTGAAAGTCTCTGTTAGCGCATGTTCAT 2517
||||||||||||||| ||||| || ||| || || |||| ||||| || |||| ||||||
Sbjct 2873 GACTTGGATCTTCCACCAGAGCTT-GACACTCCT-AAAGCCTCTGCTAACGCACGTTCAT 2930
Query 2518 CGGTTTTTATTACCCCTACACAAGGCATGCCCGTAAGTCAGATTTGGAG-CGAGAAATCT 2576
| |||| | || ||| | ||||| ||||||||||||||||||||||| | ||||||||
Sbjct 2931 CTACTTTTGTGACACCTCCTCAAGGTATGCCCGTAAGTCAGATTTGGAGTC-AGAAATCT 2989
Query 2577 TCCCTTGCTGCTGAGCAAGCTGCAGCGGGAAGCTTTGACACTGCAATGCGTTTGCTCCAC 2636
||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct 2990 TCCCTTGCTGCTGAGCAGGCTGCAGCAGGAAGCTTCGACACTGCAATGCGTTTGCTCCAC 3049
Query 2637 AGACAGCTTGGCATAAAGAACTTTGCGCCTTTAAAATCGAAGTTTCTTGATCTGTTCAGT 2696
|| ||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 3050 AGGCAGCTTGGCATTAAGAACTTTGCGCCTTTGAAATCGATGTTTCTTGATCTGTTCAGT 3109
Query 2697 GGGAGCCATAGCTATCTGCGTGCCTTTTCTTCATCTCCTGTGGTTCCTCTTGCCATTGAG 2756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3110 GGGAGCCATAGCTATCTGCGTGCCTTTTCTTCATCTCCTGTGGTTCCTCTTGCCATTGAG 3169
Query 2757 CGTGGATGGAGTGAGTCTTCCAGTCCTAACGTCCGTGGCCCGCCAGCTCTTGTTTTCGAT 2816
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3170 CGTGGATGGAGTGAGTCTTCCAGTCCTAACGTCCGTGGCCCGCCAGCTCTTGTTTTTGAT 3229
Query 2817 TTCTCTCAGCTAGAAGCGAAGCTCAAATCCGGCTACAAAGCCACAACAGCTGGGAAATTA 2876
||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 3230 TTCTCTCAGCTTGAAGCAAAGCTCAAATCCGGCTACAAAGCTACAACAGCTGGGAAACTA 3289
Query 2877 TCTGAGGCTCTCCGTGTCTTCCTTTCTATTCTCCAAACCATCCCATTGGTGGTAGTTGAG 2936
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3290 TCTGAGGCTCTTCGTGTCTTCCTCTCTATTCTCCAAACCATCCCATTGGTGGTAGTTGAG 3349
Query 2937 TCAAGAAGAGAAGTCGATGATGTTAAGGAACTGGTCATCATAGTCAAAGAATATGTCCTC 2996
|||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||||
Sbjct 3350 TCAAGAAGAGAAGTAGATGAGGTTAAGGAACTGGTCATCATTGTTAAAGAATATGTCCTC 3409
Query 2997 GGTCTTCAAATGGAGCTCAAGAGGAGAGAGATGAAAGATGATCCGGTGAGGCAGCAAGAG 3056
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3410 GGTCTTCAATTGGAGCTCAAGAGGAGAGAGATGAAAGATGATCCGGTGAGGCAGCAAGAG 3469
Query 3057 CTTGCTGCTTACTTCACTCACTGTAAACTCCAAACACCTCACCTACGGCTCGCGTACTTT 3116
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3470 CTCGCTGCTTACTTCACTCACTGTAAACTTCAAACACCTCACCTACGGCTCGCGTACTTC 3529
Query 3117 AGTGCAATGACCGTCTGCTACAAGGCAAAGAACATGGCTACTGCTGCCCACTTCGCCAGA 3176
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 3530 AGTGCAATGACCGTCTGCTACAAGTCAAAGAACATGGCTACTGCTGCTCACTTCGCCAGA 3589
Query 3177 AGTTTGTTGGATACAAACCCTACTATTGAGAGCCAGGCCAGGACGGCTAGACAAGTTATG 3236
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3590 AGTTTGTTGGATACAAACCCAACTATTGAGAGCCAGGCCAGGACGGCTAGACAAGTTATG 3649
Query 3237 CAAGCTGCTGACCGCAACATGACAGATGCAACCGCGCTCAACTACGACTTTAGAAACCCG 3296
||||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 3650 CAAGCAGCTGAACGCAACATGACAGATGCAACAACACTCAACTACGACTTTAGAAACCCG 3709
Query 3297 TTTGTGATATGCGGGTCCACTTACGTGCCAATCTACAAAGGACAGAAAGATGTGGCATGT 3356
||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||
Sbjct 3710 TTTGTGATATGCGGGTCCACTTATGTGCCAATCTACAAAGGACAGAAAGACGTTGCATGT 3769
Query 3357 CCTTATTGCACTGCCCGGTTTGTACCAAGCCAGGAAGGAAACATTTGCACAGTCTGCGAT 3416
||||| |||||||||||||||||||||||||||||||| ||||||||| | ||||| |||
Sbjct 3770 CCTTACTGCACTGCCCGGTTTGTACCAAGCCAGGAAGGTAACATTTGCTCGGTCTGTGAT 3829
Query 3417 CTTGCAGTCATTGGTGCAGATGCTTCTGGTTTGCTATGCTCT-CCGTCTCAAGTCC 3471
|||||||||||||| ||||| || ||||| |||||||||||| || ||||||||||
Sbjct 3830 CTTGCAGTCATTGGCGCAGACGCATCTGGCTTGCTATGCTCTGCC-TCTCAAGTCC 3884
Score = 363 bits (196), Expect = 9e-99
Identities = 228/244 (93%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 2140 GTGTTAAGATACTAGATAATGCTGGTCATTTGCCTCTAGCTTATATCACAGCTTCGGTTC 2199
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2472 GTGTTAAGATACTAGAGAATGCTGGTCATTTGCCTCTAGCTTATATCACAGCTTCGGTTC 2531
Query 2200 ATGGTTTAAATGACGTCGCTGAGCGACTGGCCATTGAGTTAGGAGACAACGTGCCCTCAT 2259
||||||||| |||| | ||||||||||| || |||||| |||||||||| ||||| ||||
Sbjct 2532 ATGGTTTAACTGACATTGCTGAGCGACTAGCAATTGAGCTAGGAGACAATGTGCCTTCAT 2591
Query 2260 TGCCTGAAGGGAAAACTCCATCGCTTCTAATGCCACCGCCTCCCATCATGTGTGGTGGCG 2319
||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |
Sbjct 2592 TGCCTGAAGGGAAGACTCCATCGCTTTTAATGCCACCGTCTCCCATCATGTGTGGTGGTG 2651
Query 2320 ATTGGCCTCTTCTGAGAGTGATGAAAGGAATATTTGAAGGAGGGCTTGAGAGTGCAAACC 2379
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2652 ATTGGCCTCTACTGAGAGTGATGAAAGGAATATTTGAAGGAGGACTTGAGAGTGCAAACA 2711
Query 2380 GAGG 2383
||||
Sbjct 2712 GAGG 2715
> AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:22919534-22924024
FORWARD LENGTH=4098
Length=4098
Score = 2809 bits (1521), Expect = 0.0
Identities = 1928/2125 (91%), Gaps = 25/2125 (1%)
Strand=Plus/Plus
Query 15 GAGATTATGTTGACCAAGTTC-AAGACCAAGAGTAACAGAGTTAAAGGTCTGAGCTTTCA 73
|||||||||||||| |||||| || ||||| |||||||||||||| || ||||| |||||
Sbjct 146 GAGATTATGTTGACAAAGTTCGAA-ACCAAAAGTAACAGAGTTAAGGGACTGAGTTTTCA 204
Query 74 CCCTAAAAGACCATGGATTCTCGCCAGTTTACACAGTGGTGTGATCCAGCTCTGGGATTA 133
||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 205 CCCTAAACGACCATGGATTCTCGCGAGTTTGCACAGTGGCGTGATCCAGCTCTGGGATTA 264
Query 134 CCGTGTGGGTACCTTGATCGATAAG-TTTGACGGGCACCAAGGACCTGTTCGTGGTGTTC 192
||| ||||||| ||||||||| || || |||| ||| |||||||||||||||||||||
Sbjct 265 TCGTATGGGTACTTTGATCGAT-AGATTCGACGAACACGAAGGACCTGTTCGTGGTGTTC 323
Query 193 ATTTTCACACTTCACAGCCTCTATTCGTCTCTGGAGGGGATGATTGCAAGATAAAAGTTT 252
|||| |||| ||| |||||||| |||||||| ||||||||||||| |||||| ||||| |
Sbjct 324 ATTTCCACAATTCTCAGCCTCTCTTCGTCTCCGGAGGGGATGATTACAAGATTAAAGTGT 383
Query 253 GGAACTAC-AAAACACACTGGTGTCTTTTCACTCTTCTTGGACATCTTGATTATATCCGC 311
|||||||| ||||| ||| |||| |||||||||||||| || ||||||||||||||||||
Sbjct 384 GGAACTACAAAAAC-CACAGGTGCCTTTTCACTCTTCTAGGGCATCTTGATTATATCCGC 442
Query 312 ACGGTTCAGTTTCATCACGAATACCCATGGATTCTGAGTGCCAGTGACGACCAAACTATC 371
||||||||||| ||||| || |||||||||||| ||||||| ||||| || |||||||||
Sbjct 443 ACGGTTCAGTTCCATCATGAGTACCCATGGATTGTGAGTGCAAGTGATGATCAAACTATC 502
Query 372 CGTATATGGAACTGGCAATCACGGACTTGTGTCTCTGTCTTGGCTGCTCACAATCATTAT 431
|||||||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||
Sbjct 503 CGTATATGGAACTGGCAATCACGGACTTGTGTTTCTGTATTGACTGGTCACAATCATTAT 562
Query 432 GTTATGTGTGCTTCTTTCCACCCAAAAGATGACCTTGTTGTATCAGCTTCCTTAGATCAG 491
|||||||||||||||||||| || ||||| ||||| || ||||||||||| |||||||||
Sbjct 563 GTTATGTGTGCTTCTTTCCATCCGAAAGAAGACCTCGTCGTATCAGCTTCGTTAGATCAG 622
Query 492 ACTGTTCGTGTTTGGGAAATTGGTGCTCTTAAGAAGAAGACTGTATCTCCTTCTGATGAT 551
||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 623 ACTGTTCGTGTTTGGGATATTGGTGCTCTTAGGAAGAAGACTGTATCTCCTGCTGATGAT 682
Query 552 ATCATGAGGTTGGCTGAGATAAATAGTGATCTTTTTGATAGTGTTGATGTCACAGTCAAA 611
|||||||||||| || |||| |||||||||||||||| | | ||||||| || |||||
Sbjct 683 ATCATGAGGTTGACTCAGATGAATAGTGATCTTTTTGGTGGAGTTGATGCCATTGTCAAG 742
Query 612 TACGTCCTTGAAGGTCATGAAAGAGGTGTAATTTGGGCTGCTTTTCATCCCAACCTGCCT 671
||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||
Sbjct 743 TACGTTCTTGAAGGTCATGATAGAGGTGTAAACTGGGCTGCTTTTCATCCCACCCTGCCT 802
Query 672 CTTATCGTCTCGGGTTCAGATGACCGCCAAGTAAAGCTGTGGCGTATGAATGAAACTAAA 731
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 803 CTTATTGTCTCGGGTGCAGATGACCGCCAAGTAAAGCTGTGGCGTATGAATGAAACTAAA 862
Query 732 GCTTGGGAGGTGGATACATTGCGAGGTCACATGAATAATGTTTCATCCGTTATGTTCCAT 791
|||||||||||||||||||||||||| || |||||||| |||||||| ||||||||||||
Sbjct 863 GCTTGGGAGGTGGATACATTGCGAGGCCATATGAATAACGTTTCATCTGTTATGTTCCAT 922
Query 792 GCAAAACAAGACATAATTGTATCAAACTCTGAGGATAAAAGCATCCGTGTCTGGGATGCT 851
|||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 923 GCAAAACAGGACATAATTGTATCAAACTCTGAAGATAAGAGCATCCGTGTCTGGGATGCT 982
Query 852 ACCAAGCGAACTGGAATCCAAACTTTTCGCCGTGAACATGATCGATTCTGGAGTCTTGCA 911
||||||||||||||| | || ||||| || |||||||||||| ||||||||| |||||||
Sbjct 983 ACCAAGCGAACTGGACTTCAGACTTTCCGTCGTGAACATGATAGATTCTGGATTCTTGCA 1042
Query 912 GTTCACCCTGAGATTAATCTACTAGCAGCAGGACATGACAATGGTATGATTGTCTTCAAA 971
|||||||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||
Sbjct 1043 GTTCACCCTGAGATGAATCTACTAGCAGCAGGACATGACAGTGGCATGATTGTGTTCAAG 1102
Query 972 CTTGAGAGAGAACGTCCTGCATTTGCTTTGAGTGGTGATTCATTATTCTATGCCAAGGAT 1031
||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||
Sbjct 1103 CTTGAGAGAGAACGTCCTGCATTTGCTTTGAGTGGGGATTCTTTGTTCTATGCCAAGGAT 1162
Query 1032 AGATTTTTACGGTGCTATGAATATTCAACTCAAAAAGATTCCCAAGTTATTCCTATACGG 1091
||||| || |||| |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1163 AGATTCTTGCGGTACTATGAATATTCAACTCAAAGGGATTCCCAAGTTATCCCTATACGG 1222
Query 1092 AGTCCTGGTACCCCAAGCTTGAATCAAAGTCCTAGGACTTTATCGTACAGTCCAACAGAA 1151
|||| ||||| ||||||||||||||||||||||||||| |||| |||||||| || |||
Sbjct 1223 CGTCCGGGTACTCCAAGCTTGAATCAAAGTCCTAGGACTCTATCATACAGTCCCACTGAA 1282
Query 1152 AATGCAGTTCTGATCTGCTCAGATCTGGATGGTGGTTCTTACGAGTTGTACATCATACCA 1211
||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1283 AATGCAGTTTTGATCTGCTCAGATCTGGATGGTGGTTCGTATGAGTTGTACATCATACCG 1342
Query 1212 AAAGACAG-------A--AGCGACGTTGTGCAAGATG-AAATGCGGGGGAAAGGTGGTTC 1261
||||| || | || |||||||||||||||| ||| | | |||| |||||| ||
Sbjct 1343 AAAGATAGTGTTGGCAGGAGTGACGTTGTGCAAGATGCAAA-GAGAGGGACAGGTGGCTC 1401
Query 1262 TGCGGTGTTCATTGCTCGAAATCGGTTTGCTGTTCTGGAGAAAAGCACCAGCCAGGTGCT 1321
||| || |||||||| || || || ||||||||||| ||||||||||||||||| |||||
Sbjct 1402 TGCAGTATTCATTGCCCGTAACCGATTTGCTGTTCTCGAGAAAAGCACCAGCCAAGTGCT 1461
Query 1322 AGTGAAGAATCTAAAGAATGAGGTGGTTGAAAAGAGTTCTCTGCCTATTCCCGCAGACGC 1381
||| |||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||
Sbjct 1462 AGTCAAGAATCTAAAGAATGAGGTGGTTAAAAAGAGTCCTCTGCCTATTCCCACAGATGC 1521
Query 1382 TATCTTTTATGCTGGGACTGGAAATTTGCTTTGTAGGTCTGAGGATAAAGTGGTTATATT 1441
||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| ||
Sbjct 1522 TATCTTTTATGCTGGGACTGGGAATTTGCTTTGTAGATCTGAGGATAAAGTAGTTATCTT 1581
Query 1442 TGACCTTCAACAAAGGCTTGTTCTTGGTGAGCTTCAGATACCGTTTCTTAGGTACGTTGT 1501
|||||| || |||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct 1582 TGACCTCCAGCAAAGGCTTGTTCTTGGTGAGCTTCAGACACCATTTGTTAGGTACGTTGT 1641
Query 1502 TTGGTCTAACGATATGGAGAGTGTTGCTTTGCTCGGCAAACATTA-TATCATTATTGCGA 1560
|||||| | |||||||||||||||||||||||| |||||||| | ||||||||| ||||
Sbjct 1642 TTGGTCCAGTGATATGGAGAGTGTTGCTTTGCTCAGCAAACAT-ACTATCATTATCGCGA 1700
Query 1561 GCAAAAAACTTGCTT-TCCAGTGCATGCTTCATGAGA-GAATACGTGTGAAAAGTGGAGC 1618
|||||||||||| || ||||||||| ||||||||||| || |||||||||||||||||||
Sbjct 1701 GCAAAAAACTTG-TTCTCCAGTGCACGCTTCATGAGACGA-TACGTGTGAAAAGTGGAGC 1758
Query 1619 ATGGGACGACAATGGTGTCTTCATTTACACTACTCTGAACCACATCAAGTATTGTCTTCC 1678
|||||||| |||||||||||||||||||| ||| |||| || |||||||| ||||||||
Sbjct 1759 TTGGGACGATAATGGTGTCTTCATTTACACAACTTTGAATCATATCAAGTACTGTCTTCC 1818
Query 1679 TAATGGAGATAGTGGAATCATCAAAACCCTGGATGTCCCAATCTACATCACCAAGGTGTC 1738
|||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1819 TAATGGAGATAGTGGAATCATCCGAACCCTGGATGTCCCAATCTATATCACCAAGGTGTC 1878
Query 1739 TGGAAATACAATCTTTTGCTTGGACCGGGATGGGAAAAACAGGGCTATCACCATTAATGC 1798
||| |||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||
Sbjct 1879 TGGTAATACAATCTTTTGCTTGGATCGGGATGGCAAAAACAAGGCTATCACCATTAATGC 1938
Query 1799 AACTGAATACATTTTCAAGCTTGCACTGCTGAGAAAGAGATATGATCATGTCATGAGCAT 1858
||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1939 AACCGAGTACATTTTCAAGCTTTCACTGCTGAGGAAGAGATATGATCATGTCATGAGCAT 1998
Query 1859 GATAAAGAACTCCCAGCTATGTGGACAGGCTATGATCGCTTATCTTCAGCAGAAAGGTTT 1918
|||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||| ||
Sbjct 1999 GATAAAGAACTCTCAGCTATGTGGACAGGCTATGATTGCTTACCTGCAGCAGAAAGGATT 2058
Query 1919 TCCTGAAGTTGCCCTCCACTTTGTTGAAGACGAGAGGATCCGATTCAA-CTTGGCTCTTG 1977
||||||||||||||||| ||||||||||| ||||||||||||||||| || ||||||||
Sbjct 2059 CCCTGAAGTTGCCCTCCATTTTGTTGAAGATGAGAGGATCCGATTCAATCT-GGCTCTTG 2117
Query 1978 AAAGTGGCAACATCAGTGTAGCTGTTGCATCCGCTACAGAGATTAATGAGAAAGACCACT 2037
||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||
Sbjct 2118 AAAGTGGCAACATCAGTGTGGCTGTTGCATCCGCTACACAGATTAACGAGAAAGACCACT 2177
Query 2038 GGTATAGACTCGGAGTGGAGGCTCTTCGTCAAGGAAATTCTAGAATTGTTGAGTTTGCGT 2097
|||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||| |
Sbjct 2178 GGTATAGACTTGGAGTGGAGGCTCTTCGCCAAGGTAATTCTGGAATTGTTGAGTTTGCAT 2237
Query 2098 ACCAGCAGACAAAGAACTTTGAGAG 2122
|||||||||||||||||||||||||
Sbjct 2238 ACCAGCAGACAAAGAACTTTGAGAG 2262
Score = 1103 bits (597), Expect = 0.0
Identities = 926/1085 (85%), Gaps = 21/1085 (2%)
Strand=Plus/Plus
Query 2417 TGAAGAAGATAACGACGGGGTTTGTGAATGGGGAGGAATCGGAGACTTGGAT-CTTCCAA 2475
||||||||| ||||| | || ||| || || ||| | | |||||||| | || |||
Sbjct 2749 TGAAGAAGAAAACGATGAGGAAGGTGGAT--GG-GGACTTGAAGACTTGG-TGCTCCCAC 2804
Query 2476 CAGAG-TTAGACTCT-CTGAAAGTCTCTGTTAGCGCATGTTCATCGGTTTTTATTACCCC 2533
||||| || ||| || || |||| ||||| || ||| ||||||| |||||| | || ||
Sbjct 2805 CAGAGCTT-GACACTCCT-AAAGCCTCTGCTAATGCACGTTCATCTGTTTTTGTGACACC 2862
Query 2534 TACACAAGGCATGCCCGTAAGTCAGATTTGGAGCGAGAAATCTTCCCTTGCTGCTGAGCA 2593
| | ||||| |||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct 2863 TCCCCAAGGTATGCCCGTAAGTCAGAGCTGGAGCCAGAAATCTTCTCTTGCTGCTGAGCA 2922
Query 2594 AGCTGCAGCGGGAAGCTTTGACACTGCAATGCGTTTGCTCCACAGACAGCTTGGCATAAA 2653
||| |||||||||||||| ||||||||||||||| ||||||||||||||||||| || ||
Sbjct 2923 AGCCGCAGCGGGAAGCTTCGACACTGCAATGCGTCTGCTCCACAGACAGCTTGGTATCAA 2982
Query 2654 GAACTTTGCGCCTTTAAAATCGAAGTTTCTTGATCTGTTCAGTGGGAGCCATAGCTATCT 2713
||||||| | ||||| ||||||| |||||| |||||||||| ||| ||||||||||||||
Sbjct 2983 GAACTTTACACCTTTGAAATCGATGTTTCTAGATCTGTTCAATGGCAGCCATAGCTATCT 3042
Query 2714 GCGTGCCTTTTCTTCATCTCCTGTGGTTCCTCTTGCCATTGAGCGTGGATGGAGTGAGTC 2773
|||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct 3043 GCGTGCTTTTTCTTCATGTCCTGTGGTTCCACTTGCCATTGAGCGTGGATGGAGCGAGTC 3102
Query 2774 TTCCAGTCCTAACGTCCGTGGCCCGCCAGCTCTTGTTT-TCGATTTCTCTCAGCTAGAAG 2832
||||||||| ||||||||| |||| ||||||||||||| | ||||||||||||||||| |
Sbjct 3103 TTCCAGTCCCAACGTCCGTAGCCCACCAGCTCTTGTTTAT-GATTTCTCTCAGCTAGACG 3161
Query 2833 CGAAGCTCAAATCCGGCTACAAAGCCACAACAGCTGGGAAATT-ATCTGAGGCTCTCCGT 2891
|||||||||||||||||||||||| |||||| |||||||||| | ||||||||||||||
Sbjct 3162 AGAAGCTCAAATCCGGCTACAAAGCTACAACAACTGGGAAATTCA-CTGAGGCTCTCCGT 3220
Query 2892 GTCTTCCTTTCTATTCTCCAAACCATCCCAT-TGGTGGTAGTTGAGTCAAGAAGAGAAGT 2950
||||||||||||| || || |||||||| | | |||||||| ||| |||||||||||||
Sbjct 3221 CTCTTCCTTTCTATCCTGCACACCATCCC-TCTAGTGGTAGTCGAGACAAGAAGAGAAGT 3279
Query 2951 CGATGATGTTAAGGAACTGGTCATCATAGTCAAAGAATATGTCCTCGGTCTTCAAATGGA 3010
||||| || |||||| | || | || || |||||||||||||| ||||||||||||||
Sbjct 3280 GGATGAGGTCAAGGAATTAATCGTTATCGTTAAAGAATATGTCCTTGGTCTTCAAATGGA 3339
Query 3011 GCTCAAGAGGAGAGAGATGAAAGATGATCCGGTGAGGCAGCAAGAGCTTGCTGCTTACTT 3070
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3340 GCTCAAGAGGAGAGAGATGAAAGATGATCCGGTGAGGCAGCAAGAGCTCGCTGCTTACTT 3399
Query 3071 CACTCACTGTAAACTCCAAACACCTCACCTACGGCTCGCG-TACTTTAGTGCAATGACCG 3129
||||||||| || ||||||||||||||| ||||||| ||| | ||| ||||||||| |
Sbjct 3400 CACTCACTGCAACCTCCAAACACCTCACTTACGGCTTGCGCTGCTT-AGTGCAATGGGTG 3458
Query 3130 TCTGCTACAAGGCAAAGAACATGGCTACTGCTGCCCACTTCGCCAGAAGTTTGTTGGATA 3189
|||||||||||||||||||| | || |||||| | | ||||||||||| ||||||| |
Sbjct 3459 TCTGCTACAAGGCAAAGAACCTCGCCACTGCTTCTAATTTCGCCAGAAGACTGTTGGAAA 3518
Query 3190 CAAACCCTACTATTGAGAGCCAGGCCAGGACGGCTAGACAAGTTATGCAAGCTGCTGACC 3249
||| ||| | | | || ||||| |||| || ||||||||||||| ||||||| ||||| |
Sbjct 3519 CAAGCCC-AGT-T-GATAGCCAAGCCAAGATGGCTAGACAAGTTGTGCAAGCCGCTGAAC 3575
Query 3250 GCAACATGACAGATGCAACCGCGCTCAACTACGACTTTAGAAACCCGTTTGTGATATGCG 3309
| |||||||| |||| ||| ||| ||||||||||| || ||||| |||||| |||| |
Sbjct 3576 GTAACATGACCGATGAAACAAAGCTTAACTACGACTTCAGGAACCCTTTTGTGGTATGTG 3635
Query 3310 GGTCCACTTACGTGCCAATCTACAAAGGACAGAAAGATGTGGCATGTCCTTATTGCACTG 3369
| ||||| || || || ||||||| |||||||||||| || |||||||||| ||||| |
Sbjct 3636 GTTCCACATATGTCCCGATCTACAGAGGACAGAAAGACGTCTCATGTCCTTACTGCACCG 3695
Query 3370 CCCGGTTTGTACCAAGCCAGGAAGGAAACATTTGCACAGTCTGCGATCTTGCAGTCATTG 3429
||||||||||||||| ||||||||||||||| ||||| ||||| ||||| ||||| ||||
Sbjct 3696 CCCGGTTTGTACCAAACCAGGAAGGAAACATCTGCACGGTCTGTGATCTAGCAGTGATTG 3755
Query 3430 GTGCAGATGCTTCTGGTTTGCTATGCTCTCCGTCTCAAGTCCTATGAAGAAATTAAGATT 3489
| ||||| || ||||||||| |||||||||| |||||||||| ||| || || |||||
Sbjct 3756 GCGCAGACGCATCTGGTTTGTTATGCTCTCCATCTCAAGTCCGGTGATCAATTTCAGATT 3815
Query 3490 -CATA 3493
||||
Sbjct 3816 TCATA 3820
Score = 379 bits (205), Expect = 9e-104
Identities = 233/247 (94%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 2140 GTGTTAAGATACTAGATAATGCTGGTCATTTGCCTCTAGCTTATATCACAGCTTCGGTTC 2199
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2391 GTGTTAAGATACTGGAGAATGCTGGTCATTTGCCTCTAGCTTATATCACAGCTTCGGTTC 2450
Query 2200 ATGGTTTAAATGACGTCGCTGAGCGACTGGCCATTGAGTTAGGAGACAACGTGCCCTCAT 2259
|||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||
Sbjct 2451 ATGGTTTAAATGACATTGCTGAGCGACTGGCAACTGAGTTAGGAGACAACGTGCCCTCAT 2510
Query 2260 TGCCTGAAGGGAAAACTCCATCGCTTCTAATGCCACCGCCTCCCATCATGTGTGGTGGCG 2319
|||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||| |
Sbjct 2511 TGCCTGAAGGAAAAACTCCATCGCTTCTAATGCCACCGACACCCATCATGTGTGGTGGTG 2570
Query 2320 ATTGGCCTCTTCTGAGAGTGATGAAAGGAATATTTGAAGGAGGGCTTGAGAGTGCAAACC 2379
||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 2571 ATTGGCCTCTTCTTAGAGTGATGAAAGGAATATTTGAAGGAGGACTTGAGAGTGCAGACA 2630
Query 2380 GAGGAGG 2386
|||||||
Sbjct 2631 GAGGAGG 2637
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 174029125267
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5