BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932171 Length=550 Score E Sequences producing significant alignments: (Bits) Value AT2G33793.1 | Symbols: | unknown protein; Has 35333 Blast hits... 289 2e-77 > AT2G33793.1 | Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr2:14296994-14300506 FORWARD LENGTH=1401 Length=1401 Score = 289 bits (156), Expect = 2e-77 Identities = 197/216 (91%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 75 CTCCAGGACG-ATTCCGATGTCAATGTTTTTAGCGATCTCAAAGAAATCATGTCGGCGTT 133 |||| ||||| ||| |||||| |||||| ||||||| |||||| ||||||||||||||| Sbjct 195 CTCCCGGACGAATT-GGATGTCGATGTTTCTAGCGATTTCAAAGGAATCATGTCGGCGTT 253 Query 134 GCAGCAAATCAGAGAGAAAGCGCACGAAGATGCCCGGAAGCAGAAGGAAGAGAGCATCTC 193 ||||||| |||||||||||||||||||||||| ||| ||| |||||||||| ||||| || Sbjct 254 GCAGCAATTCAGAGAGAAAGCGCACGAAGATGGCCGTAAGAAGAAGGAAGAAAGCATTTC 313 Query 194 CAGTGTCTCCACTGAGGTGAAGTCAAAGATTGACGAGCTGAAGTCAAAACTTGAGAAAGA 253 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 314 CAGTGTGTCCACTGAGGTGAAGTCAAAGATTGACGAGCTGAAGTCAAAACTTGAGAAAGA 373 Query 254 AAGACAAAA-TTTCGCCAAAGCACTTTCAAATGAGT 288 ||||||||| ||| |||||||||||||||| |||| Sbjct 374 AAGACAAAACTTTT-CCAAAGCACTTTCAAA-GAGT 407 Score = 274 bits (148), Expect = 6e-73 Identities = 183/199 (92%), Gaps = 5/199 (3%) Strand=Plus/Plus Query 349 GGAAGAAGGAGGAGACAATGATAACGGAACACGAGAAGTTCTGCACTGAAAAGCTTGCTC 408 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 571 GGAAGAAGGAGAAGACAATGATAACGGAACAGGAGAAGTTCTGCACTGAAAAGCTTGCTC 630 Query 409 AATTGGAAGAGTCCCTGAAGAAAAAGAAACTGGATGACGAAAA-TTTCACCATACTGAGG 467 ||||||||||||| |||||||||||||||| || |||| |||| ||||| |||||||||| Sbjct 631 AATTGGAAGAGTCACTGAAGAAAAAGAAACGGGGTGAC-AAAACTTTCAGCATACTGAGG 689 Query 468 AAAACTCTCGGCTCTTTTCTGGAGAACGAAGCCTCTGATGAAGAATACCCACCTGATGAG 527 ||||||||||||||||||||||| ||||| || |||||||| |||| ||||||||||||| Sbjct 690 AAAACTCTCGGCTCTTTTCTGGAAAACGAGGCTTCTGATGAGGAATTCCCACCTGATGAG 749 Query 528 TGAAAGATCGTTAACGTCT 546 |||||||| | ||||||| Sbjct 750 TGAAAGAT--T-AACGTCT 765 Score = 132 bits (71), Expect = 4e-30 Identities = 75/77 (97%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1 CTCTCTAAGTTTCGTCTGCAATGTCGTCTACCAGAAGAGGCAGTAAGAGAACTCGGCCAG 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 94 CTCTCTAAGTTTCGTCTGCAATGTCGTCTACCAGAAGAGGCACTAAGAGAACTCGGCCAG 153 Query 61 ATCCGCCGCAATCGCTC 77 | ||||||||||||||| Sbjct 154 AGCCGCCGCAATCGCTC 170 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26372927175 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5