BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932184 Length=994 Score E Sequences producing significant alignments: (Bits) Value AT2G22200.1 | Symbols: | Integrase-type DNA-binding superfamil... 826 0.0 AT3G52930.1 | Symbols: | Aldolase superfamily protein | chr3:1... 313 3e-84 > AT2G22200.1 | Symbols: | Integrase-type DNA-binding superfamily protein | chr2:9443128-9444423 REVERSE LENGTH=1296 Length=1296 Score = 826 bits (447), Expect = 0.0 Identities = 689/796 (87%), Gaps = 56/796 (7%) Strand=Plus/Plus Query 4 TCTATTTCAATCCTCTCATGGAAACTGCTTCTCTTCCTTTCCCTGTCCCAAACACGAGCT 63 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 200 TCTATTTCAATCCTCTCATGGAAACTGCTTCTCTTTCTTTCCCTGTCCCAAACACGAGCT 259 Query 64 TCGGTTTAAACCAACCTAAACCTCTTGGTCTAAACCAGCTCACACCATACCAAATTCATC 123 ||||| ||||| || ||| ||||| |||||||||||||||||||||||||||||||||| Sbjct 260 TCGGTGTAAACAAATCTATGCCTCTCGGTCTAAACCAGCTCACACCATACCAAATTCATC 319 Query 124 AGATTCAGAACCAGCTTAACCATAGACGTAGCACAACCTCAAACCTCTCTCCAAAACCA- 182 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct 320 AGATTCAGAACCAGCTTAACCATAGACGTAGCACAATCTCAAACCTCTCTCCAAA-CCGT 378 Query 183 ATCCGAATGAAGAACTTCTCACCTTCTTCCTCCAAAACCAAGAATCTCTACAGAGGCGTA 242 ||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 379 ATCAGAATGAAGAACTTAACACCTTCTACCTCCAAAACCAAGAATCTCTACAGAGGCGTA 438 Query 243 AGACAAAGGCACTGGGGAAAATGGGTCGCTGAGATCCGCTTGCCCAAGAACCGGACCCGT 302 || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 439 AGGCAAAGGCACTGGGGGAAATGGGTCGCTGAGATCCGTTTGCCCAAGAACCGGACCCGT 498 Query 303 CTCTGGCTCGGAACATTCGAAACTGCTGAAGAAGCCGCCTTGGCTTACGACCAAGCTGCT 362 ||||||||||| ||||||||||| || ||| |||||||||| |||||||||||||||||| Sbjct 499 CTCTGGCTCGGGACATTCGAAACCGCCGAAAAAGCCGCCTTAGCTTACGACCAAGCTGCT 558 Query 363 TTTCAGCTCCGTGGAGATATCACGAAGCTCAACTTCCCAAACCTCAGACACGAAGACATT 422 ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||| Sbjct 559 TTTCAGCTCCGTGGAGATATCGCGAAGCTTAACTTCCCAAACCTCATACACGAAGACATG 618 Query 423 AATCCTCTCCCTTCCTCTGTCGATGCAAAACTTCAAGCTATTTGCAAGAGTTTGAGAAAA 482 |||||||||||||||||||| ||| | || ||||||||||| ||||| |||||||||||| Sbjct 619 AATCCTCTCCCTTCCTCTGTTGATACCAAGCTTCAAGCTATCTGCAAAAGTTTGAGAAAA 678 Query 483 ACAGAGGAGAAGTA-CTCTGTTTCAGGTAAAACA--G-AGCA-T--GTT--CT--GC--C 529 |||||||| || | ||||||||| | | ||||| | || | | ||| || | | Sbjct 679 ACAGAGGA-AATTTGCTCTGTTTCTGATCAAACAAAGGAGTACTCTGTTTACTCTGTTTC 737 Query 530 A-A-AAA-CAGAGCTTTTCCTGCCAAAAACAGAGC-----------AA---------TT- 565 | | ||| |||||||||||||||||||| |||||| || || Sbjct 738 AGATAAAACAGAGCTTTTCCTGCCAAAAGCAGAGCTTTTCTTGCCTAAAAGAGAGCATTT 797 Query 566 GGAGACAAAGGAGTTCTTCGA-TGAGTCACCGAAAAGCGATGAGAACTCGT--------- 615 ||||||||| ||| ||| | | ||||||||||| ||||||||||| ||||| Sbjct 798 GGAGACAAATGAGCTCT-CTAATGAGTCACCGAGAAGCGATGAGACCTCGTTGTTGGATG 856 Query 616 ---CGCAGGCGGGATATTCATCGTCGGATATAACATTGCTGGATTTCTCGGATTCAGAGT 672 ||||||||| ||||||||||||||||| |||||| ||||||||||||||| | |||| Sbjct 857 AGTCGCAGGCGGAATATTCATCGTCGGATAAAACATTCCTGGATTTCTCGGATACTGAGT 916 Query 673 TTGAAGAGATTGGGAGTTTCGGGCTT-GTGAAGTTTCCTTCGGTGGAGATTGATTGGGAT 731 ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 917 TTGAAGAGATTGGAAGTTTCGGGCTTCG-GAAGTTTCCTTCGGTGGAGATTGATTGGGAT 975 Query 732 GCAATTAGCAAACTGG 747 |||||||| ||||||| Sbjct 976 GCAATTAGTAAACTGG 991 > AT3G52930.1 | Symbols: | Aldolase superfamily protein | chr3:19626748-19629073 REVERSE LENGTH=1911 Length=1911 Score = 313 bits (169), Expect = 3e-84 Identities = 189/199 (95%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 770 GCCAAGGTCATTGTCTTTCTTGTTCCGACGTGCGTTGCAGCAGAGTACCTTGAAGACATG 829 |||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||| Sbjct 1063 GCCATGGTCATTGTCTTTCTCATTCGGACGTGCGTTGCAGCAGTCTACCTTGAAGACATG 1122 Query 830 GGCAGGCATAGAGGAGAATGTGAAGGCAGCTCAAGAGGCGTTGTATGTGAGGTGCAAGGC 889 |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1123 GGCAGGTAAAGAGGAGAATGTCAAGGCAGCTCAAGAGGCGTTGTATGTGAGGTGCAAGGC 1182 Query 890 CAACTCTGAAGCCACACTCGGAACCTACAAGGGTGACGCTAAGCTTGGTGATGGAGCAGC 949 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1183 TAACTCTGAAGCCACACTCGGAACCTACAAGGGTGACGCTAAGCTTGGTGATGGAGCAGC 1242 Query 950 TGAGAGCCTTCACGTGAAG 968 ||||||||||||||||||| Sbjct 1243 TGAGAGCCTTCACGTGAAG 1261 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48676888443 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5