BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932197 Length=838 Score E Sequences producing significant alignments: (Bits) Value AT2G22360.1 | Symbols: | DNAJ heat shock family protein | chr2... 361 7e-99 > AT2G22360.1 | Symbols: | DNAJ heat shock family protein | chr2:9497595-9500615 FORWARD LENGTH=1615 Length=1615 Score = 361 bits (195), Expect = 7e-99 Identities = 385/472 (82%), Gaps = 32/472 (7%) Strand=Plus/Plus Query 4 AGTGTATTCAGCTAAATATGTCTCTAATACAATTTGGAAGTACTTGCATTGCTCAATGGA 63 |||||||| ||||||||||| || |||||||| |||||||||| || |||||||||||| Sbjct 114 AGTGTATTGAGCTAAATATGGCTATAATACAACTTGGAAGTACATGTGTTGCTCAATGGA 173 Query 64 GTA------CT--A-TT-C-GTC----CTCCATT-T-GCACCAG--T-GAGATCAAGTCG 103 ||| || | || | ||| || ||| | || ||| | || ||||| ||| Sbjct 174 GTATTCGTCCTCAATTTGCAGTCAGAGCT-TATTATCCCAGCAGAATCGA-ATCAACTCG 231 Query 104 CCAACTAAATTCCATG-ATCCAAATAAACTGTTTGGGTGCTTCAAAGTCGAGTATGTTCT 162 ||| | |||||||| | | |||| |||| |||||||| |||||||||||||||||||||| Sbjct 232 CCATCAAAATTCCA-GTAGCCAAGTAAATTGTTTGGGAGCTTCAAAGTCGAGTATGTTCT 290 Query 163 CACATGGATCCTTGCCTTTCTTGTCAATGCCGGGAGTGTTAAGAAATAGGCG-CAAT--T 219 ||||||| || ||||| |||||||| ||| ||||| ||| ||||||| || | | | Sbjct 291 CACATGGGTCATTGCCCTTCTTGTCCATGACGGGAATGTCCAGAAATATGCATCC-TCCT 349 Query 220 -GTAGAGGATCTCGCTTCATTGTTAAAGCTGATGCAGTTTACTATTTAGTCCTCGGAGTT 278 | |||||||||||||||| ||||| ||||||||||| |||||||| || ||||||||| Sbjct 350 CGCAGAGGATCTCGCTTCACTGTTAGAGCTGATGCAGATTACTATTCGGTACTCGGAGTT 409 Query 279 TCGAAAAACGCAACCTTATCTGAGATTAAAACCGCTTATCGGAAACTGGCTTTGAGTTAC 338 |||||||| |||||| | |||||||||||| |||||||||||| |||||| || |||| Sbjct 410 TCGAAAAATGCAACCAAAGCTGAGATTAAAAGCGCTTATCGGAAGCTGGCTAGGAATTAC 469 Query 339 CATCCGGATGTGAACAAGAATCCTGATGCAGAAGAGAGATTCATAGAAATAAGTAATGCA 398 |||||||||||||||||| |||||| |||||||||| ||||| |||||||||||| ||| Sbjct 470 CATCCGGATGTGAACAAGGATCCTGGCGCAGAAGAGAAATTCAAAGAAATAAGTAACGCA 529 Query 399 TATGAGGTCTTATCAGAAGA-GAT--GAAATCTCATTACGATAAGTATGGTG 447 |||||||| |||||||| || || |||||||| |||||||| |||||||| Sbjct 530 TATGAGGTTTTATCAGATGATGAAAAGAAATCTCTTTACGATAGGTATGGTG 581 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40840361511 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5