BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932206 Length=1468 Score E Sequences producing significant alignments: (Bits) Value AT2G22450.1 | Symbols: | riboflavin biosynthesis protein, puta... 2407 0.0 AT5G64300.1 | Symbols: ATGCH, GCH, ATRIBA1, RFD1 | GTP cyclohyd... 377 1e-103 > AT2G22450.1 | Symbols: | riboflavin biosynthesis protein, putative | chr2:9530547-9532914 FORWARD LENGTH=1761 Length=1761 Score = 2407 bits (1303), Expect = 0.0 Identities = 1412/1464 (96%), Gaps = 9/1464 (1%) Strand=Plus/Plus Query 2 TCTT-AAAACTCCGGTGAAAATGGCGTCTCTTACTCTCCGGTGCGACTCGACGCATCTTT 60 |||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 88 TCTTCAAAACTCCGGTGAAAATGGCGTCGCTTACTCTCCGGTGCGATTCGACGCATCTTT 147 Query 61 TTCCTTCGCGTGATGTTGTCAAGGGAACAAAACCATTTAGAACGAGCTTGGTGTGTACTA 120 | ||||| |||||||||||||||||||||||||||||| ||||||||||||||| | ||| Sbjct 148 TGCCTTCCCGTGATGTTGTCAAGGGAACAAAACCATTTGGAACGAGCTTGGTGTATCCTA 207 Query 121 GGATTATATCGAAGAGGTTTAATGTTAGAATGAGAGTGATATCTGAGGAAGGAGATGTGT 180 |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct 208 GGATCATATCGAAGAAGTTTAATGTTAGAATGAGAGTGATACCTGAGGAAGGAGATGTGT 267 Query 181 TCTCTTCCTCTAAGAGTAATGGATCATCAATGGGGATTGAGTTGCAACCGGATTTGGTAT 240 ||||||| ||||||||||||||||||||||||||||||||||| || || |||||||| | Sbjct 268 TCTCTTCTTCTAAGAGTAATGGATCATCAATGGGGATTGAGTTACAGCCAGATTTGGTTT 327 Query 241 CGTTTGGAACATTAGCAGCTGAAATGATTCCCACAACAATGGATTCTTCTGATGTTGAGG 300 ||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||| Sbjct 328 CGTTTGGAACATTAGCAGCTGAAATGATTCCTACAACAATGGATTCTCCTGAAGTTGAGG 387 Query 301 ATGAAGAGTTTGATTTAGATCGACCTACTGATGGATTTGCGTCTATTCCTCAAGCTATTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 388 ATGAAGAGTTTGATTTAGATCGACCTACTGATGGATTTGCGTCTATTCCTCAAGCTATTG 447 Query 361 AGGATATTCGAC-TGGGCAAGATGGTAGTTGTTGTAGATGATGAAGATAGAGAAAACGAA 419 | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 AAGATATTCGACAT-GGCAAGATGGTAGTTGTTGTAGATGATGAAGATAGAGAAAACGAA 506 Query 420 GGAGATTTGATAATGGCTGCATCGTTGG-TAACACCTGAAGCTATGGCTTTTGTTGTAAA 478 ||||||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||| Sbjct 507 GGAGATTTGATAATGGCGGCATCTTTGGCT-ACACCTGAAGCTATGGCTTTTGTTGTAAA 565 Query 479 GCATGGGACTGGAATCGTGTGTGTGAGCATGAAAGGCGAAGACTTGGAGAGGTTAGAGCT 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 566 GCATGGGACTGGAATCGTGTGTGTGAGCATGAAAGGCGAAGACTTGGAGAGGTTAGAGCT 625 Query 539 TCCTTTAATGGTGACGCGAAAGGGTAACGAGGAAAAACTCCACACGGCCTTCACGGTTTC 598 |||||||||||| ||||| |||| ||||||||||||||||| |||||||||||||||||| Sbjct 626 TCCTTTAATGGTAACGCGTAAGGATAACGAGGAAAAACTCCGCACGGCCTTCACGGTTTC 685 Query 599 AGTGGACGCGAAAAAGGGAACATCCACAGGTGTCTCAGCTCGTGATAGGGCGCAAACAAT 658 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 686 AGTGGACGCAAAAAAGGGAACATCCACAGGTGTCTCAGCTCGTGATAGGGCGCAAACAAT 745 Query 659 ATTAACCCTTGCATCAAAAGATTCAAAACCTCAAGATTTCAATCGTCCTGGTCATATTTT 718 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 746 ATTAACCCTTGCATCAAAAGATTCAAAACCTGAAGATTTCAATCGTCCTGGTCATATTTT 805 Query 719 TCCTTTGAGATACAGAGAAGGTGGTGTTCTTAAAAGAGCAGGGCATACAGAAGCCTCTGT 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 TCCTTTGAGATACAGAGAAGGTGGTGTTCTTAAAAGAGCAGGGCATACAGAAGCCTCTGT 865 Query 779 TGACTTGACTGTGTTGGCCGGTTTAGAACCAGTATCGGTTTTATGTGAGATTGTAGATGA 838 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 866 TGACTTGACTGTGTTGGCCGGTTTAGAACCAGTATCTGTTTTATGTGAGATTGTAGATGA 925 Query 839 TGATGGTTCCATGGCTAGATTACCAAGACTTCGCCAATTCGCTAAAGAGAACGACTTGAA 898 |||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| Sbjct 926 TGATGGTTCCATGGCTAGATTACCAAGACTCCGCCAATTCGCTCAAGAGAACAACTTGAA 985 Query 899 AATAATTTCAATCGCTGATTTAATCAGATACCGAAGGAAAAGAGAGAGACTGGTTGAGTT 958 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 ATTAATTTCAATCGCTGATTTAATCAGATACCGAAGGAAAAGAGAGAGACTGGTTGAGTT 1045 Query 959 TACTGCGGTTGCGCCTATACCGACAATGTGGGGACCATTCAAAGCACATTGCTTTAAGTC 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1046 TACTGCGGTTGCGCCTATACCGACAATGTGGGGACCATTCAAAGCACATTGCTTTAAGTC 1105 Query 1019 ATTACTTGATGGAGTTGAGCACATTGCAATGGTCAAGGGGGAAATCGGAGATGGGAAGGA 1078 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1106 ATTACTTGATGGAGTTGAGCACATTGCAATGGTCAAGGGAGAAATCGGAGATGGGAAGGA 1165 Query 1079 TATTCTCGTGAGAGTACACGCAGAGTGTATCACGGATGATATATTCGGAAATAGCTCGGG 1138 ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || Sbjct 1166 TATTCTCGTGAGAGTACACGCGGAGTGTATCACAGATGATATATTCGGAAATAGCTCTGG 1225 Query 1139 TGGAAAACAGTTAGCGATTGCAATGAGACTGATTGAAGAAACTGGGAGAGGTGTTTTTGT 1198 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1226 TGGAAAACAGTTAGCGATTGCAATGAGACTGATTGAAGAAAATGGGAGAGGTGTTTTTGT 1285 Query 1199 CTACTTACGTGGTCCTGAAAGTAAAGGCATTGACCTAAGCCATAAGCCTCGTACTTACAA 1258 ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 1286 CTACTTACGTGGTCCTGAAAGTAAAGGCATTGATCTAAGCCACAAGCCTCGTACTTACAA 1345 Query 1259 CACCAATTCAGATCAAGCCGAAGGTGTTTCATTTCCCGTTGCTTCACGGGAATACGGCAT 1318 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1346 CACCAATTCAGATCAAGCCGAGGGTGTTTCATTTCCCGTTGCTTCACGGGAATACGGCAT 1405 Query 1319 TGGAGCACAAATTCTGAGGGATCTTGGAGTTAGAGAGATGAAAGTGATGACGAATAATCC 1378 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1406 TGGAGCACAAATTCTAAGGGATCTTGGAGTTAGAGAGATGAAGGTGATGACGAATAATCC 1465 Query 1379 AGCACATTACGTTGGTCTTAAAGGCTATGGTTTATCAATTTCTGGTAAGGTTCCACTCAT 1438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1466 AGCACATTACGTTGGTCTTAAAGGCTATGGTTTATCAATTTCTGGTAAGGTTCCACTCAT 1525 Query 1439 TAGT-C-C-TTAAGTGTTGGTTTT 1459 || | | | |||||||||| |||| Sbjct 1526 TACTACTCCTTAAGTGTTG-TTTT 1548 > AT5G64300.1 | Symbols: ATGCH, GCH, ATRIBA1, RFD1 | GTP cyclohydrolase II | chr5:25718404-25721162 FORWARD LENGTH=2059 Length=2059 Score = 377 bits (204), Expect = 1e-103 Identities = 620/817 (76%), Gaps = 44/817 (5%) Strand=Plus/Plus Query 296 TGAGGATGAAGAGTTTGATTTAGATCGACCTACTGATGGATTT-GCGTCTATTCCTCAAG 354 ||| ||||| || ||||| || ||| ||| ||| ||| ||| | ||||| ||| | | Sbjct 397 TGAAGATGATGACTTTGAGTTGGATTTACCAACTCCTGG-TTTCTCTTCTATCCCTGAGG 455 Query 355 CTATTGAGGATATTCGACTGGGCAAGATGGTAGTTGTTGTAGATGATGAAGATAGAGAAA 414 | ||||| ||||| || | || ||| | || || ||||| |||||||||||||| |||| Sbjct 456 CCATTGAAGATATACGCCAAGGAAAGCTTGTGGTGGTTGTGGATGATGAAGATAGGGAAA 515 Query 415 ACGAAGGAGATTTGATAATGGCTGCATC-GTTGGTAACACCTGAAGCTATGGCTTTTGTT 473 | ||||| |||||| | |||||||| || ||| | |||||||||||||||||||||| || Sbjct 516 ATGAAGGGGATTTGGTGATGGCTGC-TCAGTTAGCAACACCTGAAGCTATGGCTTTTATT 574 Query 474 GTAAAG-CATGGGACTGGAATCGTGTGTGTGAGCATGAAAGGCGAAGACT-TGGAGAGGT 531 || || ||||| ||||| || || |||||||||||||||| || || | | ||||||| Sbjct 575 GT-GAGACATGGAACTGGGATAGTTTGTGTGAGCATGAAAGAAGATGA-TCTCGAGAGGT 632 Query 532 TAG-AGCTTCCTTTAATGGTGACGCGA-AAGGGTAACGAGGAAAAACTCCAC-ACGGCCT 588 | | | |||||| ||||||||| | | |||| ||||| ||||| || | | || || | Sbjct 633 T-GCACCTTCCTCTAATGGTGAATC-AGAAGGAAAACGAAGAAAAGCT-CTCTACTGCAT 689 Query 589 TCACGGTTTCAGTGGACGCGAAAA-AGGGAACATCCACAGGTGTCTCAGCTCGTGATAGG 647 | || || | ||||| || |||| | || ||| | || || || ||||||||||| ||| Sbjct 690 TTACAGTGACTGTGGATGC-AAAACATGGTACAACAACGGGAGTATCAGCTCGTGACAGG 748 Query 648 GCGCA-AACAATATTAACCCTTGCATCAAAAGATTCAAAACCTCAAGATTTCAATCGTCC 706 || | ||| ||||| | |||||||||| ||||||||| ||| | |||||||||||||| Sbjct 749 GC-AACAACCATATTGTCTCTTGCATCAAGAGATTCAAAGCCTGAGGATTTCAATCGTCC 807 Query 707 TGGTCATATTTTTCCTTTG-AGATA-CAGAGAAGGTGGTGTTCTTAAAAGAGCAGGGCAT 764 |||||||| || || || || || | | |||||||| ||||| ||||| || || || Sbjct 808 AGGTCATATCTTCCCACTGAAG-TATC-GGGAAGGTGGGGTTCTGAAAAGGGCTGGACAC 865 Query 765 ACAGAAGCCTCTGTTGACT-TGACTGTGTTGGCCGGTTTAGAACCAGTATCG-GT-TTTA 821 || ||||| |||||||| | | ||||| || || || | || || || | | || || Sbjct 866 ACTGAAGCATCTGTTGA-TCTCACTGTTTTAGCTGGACTGGATCCTGT-TGGAGTACTT- 922 Query 822 TGTGAGATTGTAGATGATGATGGTTCCATGGCTAGATTACCAAGACTTCGCCAATTCGCT 881 ||||| ||||| ||||||||||||||||||||||||||||||| |||||| |||| || Sbjct 923 TGTGAAATTGTTGATGATGATGGTTCCATGGCTAGATTACCAAAACTTCGTGAATTTGCC 982 Query 882 AAAGAGAACGACTTGAAAATAATTTCAATCGCTGATTTAATCAGATACCGAAGGAAA-AG 940 |||||| || ||||| | |||| ||||| ||||| ||||| || |||| ||| || Sbjct 983 GCCGAGAACAACCTGAAAGTTGTTTCCATCGCAGATTTGATCAGGTATAGAAG-AAAGAG 1041 Query 941 AGAGAGACTGGTTGA--GT--TTACTGCGGTTGCGCCTATACCGACAATGTGGGGACCAT 996 ||| | | | || || || || |||||| | || || || |||||||||||||| | Sbjct 1042 AGATAAATTAGTGGAACGTGCTT-CTGCGGCT-CGG--ATCCCAACAATGTGGGGACCTT 1097 Query 997 TCAAAGCACATTGCTTTAAGTC-ATTACTT-GATGGAGTTGAGCACATTGCAATGGTCAA 1054 ||| || | |||| || ||| || | || || ||| | |||||||| |||||||| || Sbjct 1098 TCACTGCTTACTGCTATAGGTCCAT-A-TTAGACGGAATAGAGCACATAGCAATGGTTAA 1155 Query 1055 GGGGGAAATCGGAGATGGG-AAGGATATTCTCGTGAG 1090 ||| || || || || || ||| | ||||||||||| Sbjct 1156 GGGTGAGATTGGTGACGGTCAAG-ACATTCTCGTGAG 1191 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72389185890 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5