BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932214 Length=417 Score E Sequences producing significant alignments: (Bits) Value AT2G22510.1 | Symbols: | hydroxyproline-rich glycoprotein fami... 686 0.0 > AT2G22510.1 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr2:9569026-9569758 REVERSE LENGTH=733 Length=733 Score = 686 bits (371), Expect = 0.0 Identities = 400/414 (97%), Gaps = 1/414 (0%) Strand=Plus/Plus Query 1 CTCAAAACCCTAATCTCCAAAAATGGCTCAGTGGTTATCATCCCTTGTCATCGCATTAAC 60 |||||| |||||||| || ||||||||||| ||||| |||||||| ||||| |||||||| Sbjct 37 CTCAAACCCCTAATC-CCCAAAATGGCTCACTGGTTGTCATCCCTAGTCATTGCATTAAC 95 Query 61 ATTCACAAGCTTTTTCACTAGTCTCTCAGCTAGTCGCCACCTTCTTCAATCAACACCAGC 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 96 ATTCACAAGCTTTTTCACTGGTCTCTCAGCTAGTCGCCACCTTCTTCAATCAACACCAGC 155 Query 121 TATTACCCCACCGGTTACAACAACATTTCCACCACTTCCCACAACCACAATGCCACCATT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 156 TATTACCCCACCGGTTACAACAACATTTCCACCACTTCCCACAACCACAATGCCACCATT 215 Query 181 TCCTCCTTCAACTTCTCTTCCTCAGCCAACTGCGTTTCCGCCATTACCGAGCTCACAAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 216 TCCTCCTTCAACTTCTCTTCCTCAGCCAACTGCGTTTCCGCCATTACCAAGCTCACAAAT 275 Query 241 ACCTTCTTTGCCTAACCCAGCACAACCCATTAATATCCCAAACTTCCCACAAATCAATAT 300 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 276 ACCTTCTTTACCTAACCCAGCACAACCCATTAATATCCCAAACTTCCCACAAATCAATAT 335 Query 301 CCCTAACTTCCCAATTTCTATCCCAAACAACTTCCCATTCAATCTTCCCACCAGCATACC 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 336 CCCTAACTTCCCAATTTCTATCCCAAACAACTTCCCATTCAATCTTCCCACCAGCATTCC 395 Query 361 AACCATCCCATTCTTCACTCCACCACCTTCCAAATGAGAAGCGAAATAAGCTCT 414 ||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 396 AACAATCCCATTCTTCACTCCACCACCTTCCAAATGAGAAGCTAATTAAGCTCT 449 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19755225357 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5