BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932285
Length=1279
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23060.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) sup... 1903 0.0
AT4G37580.1 | Symbols: HLS1, COP3, UNS2 | Acyl-CoA N-acyltransf... 1099 0.0
> AT2G23060.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily
protein | chr2:9812834-9814724 REVERSE LENGTH=1338
Length=1338
Score = 1903 bits (1030), Expect = 0.0
Identities = 1186/1262 (94%), Gaps = 8/1262 (1%)
Strand=Plus/Plus
Query 8 aaaaCCAGAGAATATGACTGTGGTTGTGGAGGTTAGAGAATACGACCCTAGTAGAGACTT 67
|||| ||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||||
Sbjct 80 AAAA-CAGAGAATATGACGGTGCTTGTGGAGGTTAGAGAATACGACCCAAGTAAAGACTT 138
Query 68 AGCCACCGTTGAAGATGTTGAACGGCGGTGCGAAGTTGGCCCAACCGGAAAACTTTCTCT 127
|||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 139 AGCCACTGTAGAAGATGTTGAACGGCGGTGCGAAGTTGGCCCAGCCGGAAAACTTTCTCT 198
Query 128 CTTCACCGATCTCTTAGGTGACCCTATTTGCCGTGTTCGACATTCTCCTTCTTACCTCAT 187
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 199 CTTCACCGATCTCTTAGGTGACCCTATTTGCCGTGTCCGACATTCACCTTCTTACCTCAT 258
Query 188 GCTGGTGGCTGAGATTGGTCCGAAGGAGAATAAAGAGTTAGTTGGCATGATTCGAGGTTG 247
|||||||||||||||||||||||| ||||| |||||||||||||| |||||||| || ||
Sbjct 259 GCTGGTGGCTGAGATTGGTCCGAAAGAGAAGAAAGAGTTAGTTGGAATGATTCGGGGATG 318
Query 248 TATCAAAACCGTTACATGTGG--T-AGTACCAAAAGACTCGATTTAACTCATAGCAAATC 304
||||||||||||||||||||| | | ||||||||||| ||||||||||||| ||||||
Sbjct 319 TATCAAAACCGTTACATGTGGTATCACCACCAAAAGACTTGATTTAACTCATAACAAATC 378
Query 305 CCAAAACGATGTCGTTATTACCAAACCACTTTACACTAAACTCGCTTACATTTTGGGTCT 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 379 CCAAAACGATGTCGTTATTACCAAACCACTTTACACTAAACTCGCTTACATTTTGGGTCT 438
Query 365 CCGCGTTTCTCCTACACACCGGAGACAAGGGATAGGGTTTAAGCTCGTGAAGGCTATGGA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 CCGCGTTTCTCCTACACACCGGAGACAAGGGATAGGGTTTAAGCTCGTGAAGGCTATGGA 498
Query 425 AGATTGGTTTAGTCAAAACGGCGCAGAATATTCTTATTTTGCAACTGAAAACGACAATCA 484
||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 499 AGATTGGTTTAGTCAAAACGGGGCTGAATATTCCTATTTTGCAACTGAAAACGACAATCA 558
Query 485 CGCTTCCGTTAATCTTTTCACCGGAAAATGTGGTTACTCCGAGTTTCGTACACCGTCGAT 544
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 559 CGCTTCCGTCAATCTTTTCACCGGAAAATGTGGTTACGCCGAGTTTCGTACACCGTCTAT 618
Query 545 TTTGGTTAATCCGGTTTACGCACACCGAGTTAACATTTCTCGTCGGGTTACCGTAATCAA 604
||||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 619 TTTGGTTAACCCGGTTTACGCACACCGGGTCAACATTTCTCGTCGGGTTACCGTAATTAA 678
Query 605 GCTTGAAGCGTCTGATGCTGAGTTACTATACCGGCTCCGGTTTAGCACAACCGAGTTTTT 664
||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 679 GCTTGAACCGTCTGATGCTGAGTTACTATACCGGCTTCGGTTTAGCACAACCGAGTTTTT 738
Query 665 TCCTCGTGACATTGACTCGGTTTTGAATAACAAACTCTCGTTAGGAACATTCGTTGCGGT 724
||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 739 CCCTCGCGACATTGACTCTGTTTTGAATAACAAACTCTCGTTAGGAACATTCGTCGCGGT 798
Query 725 TCCACGTGGCAGTTGTTATGGATCCGGGT-TCGGGTCATGGCCCGGTTCGGCTAAATTCC 783
|||||||||||||||||| |||||||||| | || |||||||||||||||||||| |||
Sbjct 799 TCCACGTGGCAGTTGTTACGGATCCGGGTCTAGG-TCATGGCCCGGTTCGGCTAAGTTCT 857
Query 784 TGGAGTATCCACCCGATTCGTGGGCGGTTTTAAGCGTTTGGAATTGTAAAGACTCGTTTC 843
||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||
Sbjct 858 TGGAGTATCCACCGGACTCGTGGGCGGTTTTAAGCGTGTGGAATTGTAAAGACTCGTTTA 917
Query 844 GGTTAGAAGTTCGTGGCGCGTCGAGATTGAGGCGCGTGGTTTCAAAAGCGACGCGCGTGG 903
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 918 GATTAGAAGTTCGCGGCGCGTCGAGATTGAGGCGCGTGGTTTCAAAAGCGACGCGCATGG 977
Query 904 TTGATAAAACGT-TACCGTTTTTGAAAATTCCGTCGATTCCGGCAGTTTTCCGGTCGTTT 962
|||||||||| | |||||||||||||||| |||||||| ||||| ||||||||| |||||
Sbjct 978 TTGATAAAAC-TCTACCGTTTTTGAAAATACCGTCGATCCCGGCGGTTTTCCGGCCGTTT 1036
Query 963 GGACTGCATTTTATGTACGGCATCGGCGGAGAAGGACCACGCGCGGAGAAAATGGTGAAG 1022
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGGCTGCATTTTATGTACGGAATCGGCGGAGAAGGACCACGCGCGGAGAAAATGGTGAAG 1096
Query 1023 GCGTTGTGTGGTCATGCGCATAATTTGGCAAAGGAAGGAGGATGCGGCGTCGTGGCGGCG 1082
|| ||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||
Sbjct 1097 GCATTGTGTGACCATGCACATAATTTGGCAAAGGAAGGAGGATGCGGCGTGGTGGCGGCA 1156
Query 1083 GAAGTAGCCGGAGGAGAGCCGCTCCGGCGAGGAATACCACATTGGAAAGTGCTATCGTGC 1142
||||| ||||| | |||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1157 GAAGTCGCCGGCGAAGAGCCGCTCCGGCGAGGGATACCGCATTGGAAAGTGCTATCGTGC 1216
Query 1143 GCCGAGGATTTGTGGTGTATTAAACGGCTTGGAGAGGATTATAGTGACGGTTCTGTTGGT 1202
|| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1217 GCTGAGGATTTGTGGTGTATTAAACGGCTTGGAGAAGATTATAGTGATGGTTCTGTTGGT 1276
Query 1203 GATTGGACTAAATCGCCACCTGGCGAATCCATTTTTGTTGACCCTAGAGAATTTTAATTT 1262
|||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||
Sbjct 1277 GATTGGACTAAATCGCCACCTGGCGATTCTATTTTTGTTGACCCTAGAGAATTTTAGTTT 1336
Query 1263 TA 1264
||
Sbjct 1337 TA 1338
> AT4G37580.1 | Symbols: HLS1, COP3, UNS2 | Acyl-CoA N-acyltransferases
(NAT) superfamily protein | chr4:17658612-17660878
FORWARD LENGTH=1846
Length=1846
Score = 1099 bits (595), Expect = 0.0
Identities = 1031/1237 (83%), Gaps = 48/1237 (4%)
Strand=Plus/Plus
Query 38 GGTTAGAGAATACGACCCTAGTAGAGACTTAGCCACCGTTGAAGATGTTGAACGGCGGTG 97
||||||||| |||||||| | ||||||||| | ||| || || || ||||| |||||
Sbjct 329 GGTTAGAGAGTACGACCCGACCCGAGACTTAGTCGGCGTGGAGGACGTGGAACGACGGTG 388
Query 98 CGAAGTTGGCCCAACCGGAAAACTTTCTCTCTTCACCGATCTCTTAGGTGACCCTATTTG 157
||||| || |||| ||| || |||||||| |||||||| || || |||||||| |||||
Sbjct 389 TGAAGTCGGACCAAGCGGCAAGCTTTCTCTTTTCACCGACCTTTTGGGTGACCCGATTTG 448
Query 158 CCGTGTTCGACATTCTCCTTCTTACCTCATGCTGGTGGCTGAGATTGGTCCGAAGGAGAA 217
| | |||||||| ||||| || |||||||||||||||||||| ||| | ||||||
Sbjct 449 TAGAATCCGACATTCACCTTCCTATCTCATGCTGGTGGCTGAGATGGGT---ACGGAGAA 505
Query 218 TAAAGAGTTAGTTGGCATGATTCGAGGTTGTATCAAAACCGTTACATGTGGTAGTACCAA 277
|| ||| |||| ||||||||| |||| ||||||||||||||||||||| | | ||||
Sbjct 506 GAAGGAGATAGTGGGCATGATTAGAGGATGTATCAAAACCGTTACATGT-G--G--CCAA 560
Query 278 AAGACTCGATTTAACTCATAGCAAATCCCAAAACGATGTCGTTATTACCAAACCACTTTA 337
|| ||||||||||| || | |||||| ||||||||||||| || || || |||||
Sbjct 561 AA-ACTCGATTTAAATC--A-CAAATCTCAAAACGATGTCG---TT---AAGCCTCTTTA 610
Query 338 CACTAAACTCGCTTACATTTTGGGTCTCCGCGTTTCTCCTACACACCGGAGACAAGGGAT 397
|||||||||||||||| | ||||| || ||||| |||||| ||| |||||||||||||
Sbjct 611 CACTAAACTCGCTTACGTCTTGGGCCTTCGCGTCTCTCCTTTTCACAGGAGACAAGGGAT 670
Query 398 AGGGTTTAAGCTCGTGAAGGCT-ATGGAAGATTGGTTTAGTCAAAACGGCGCAGAATATT 456
||||||||||||||||| | | ||||| || |||||||| |||||||| || || ||||
Sbjct 671 TGGGTTTAAGCTCGTGAA-GATGATGGAGGAATGGTTTAGACAAAACGGAGCTGAGTATT 729
Query 457 CTTATTTTGCAACTGAAAACGACAATCACGCTTCCGTTAATCTT-TTCACCGGAAAATGT 515
| ||| |||||||||| ||||| ||||| ||||| || ||| || |||||||| ||||||
Sbjct 730 CGTATATTGCAACTGAGAACGATAATCAAGCTTCTGTGAAT-TTGTTCACCGGGAAATGT 788
Query 516 GGTTACTCCGAGTTTCGTACACCGTCGATTTTGGTTAATCCGGTTTACGCACACCGAGTT 575
||||| || ||||||||||||||||||||||||||||| ||||||||||| || ||||||
Sbjct 789 GGTTATTCGGAGTTTCGTACACCGTCGATTTTGGTTAACCCGGTTTACGCTCATCGAGTT 848
Query 576 AACATTTCTCGTCGGGTTACCGTAATCAAGCTTGA-AG-C-GTCTGATGCTGAGTTAC-- 630
|| |||| || || || || || |||||| || | || | || |||||||||| ||
Sbjct 849 AATGTTTCGCGGCGAGTCACGGTTATCAAG-TT-AGAGCCGGT-TGATGCTGAG--ACGT 903
Query 631 TATACCGGCTCCGGTTTAGCACAACCGAGTTTTTTCCTCGTGACATTGACTCGGT-TTTG 689
| ||||| |||||||||||||||| |||||||| || || || ||||| ||||| ||
Sbjct 904 TGTACCGAATCCGGTTTAGCACAACAGAGTTTTTCCCGCGGGATATTGATTCGGTACTT- 962
Query 690 AATAACAAACTCTCG-TTAGGAACATTCGTTGCGGTTCCACGTGGCAGTTGTTATGGATC 748
||||||||||||||| || || || ||||| ||||| |||||||| || |||||||||||
Sbjct 963 AATAACAAACTCTCGCTT-GGGACTTTCGTCGCGGTGCCACGTGGAAGCTGTTATGGATC 1021
Query 749 CGGGTTC-GGGTCATGGCCCGGTTCGGCTAAATTCCTGGAGTATCCACCCGATTCGTGGG 807
|||| || || |||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct 1022 CGGG-TCTGGATCATGGCCCGGTTCGGCTAAATTCCTCGAATATCCACCCGAGTCATGGG 1080
Query 808 CGGTTTTAAGCGTTTGGAATTGTAAAGACTCGTTTCGGTTAGAAGTTCGTGGCGCGTCGA 867
| || |||||||| |||||||||||||||||||||| ||||||||| ||||| |||||||
Sbjct 1081 CCGTATTAAGCGTGTGGAATTGTAAAGACTCGTTTCTGTTAGAAGTACGTGGAGCGTCGA 1140
Query 868 GATTGAGGCGCGTGGTTTC-AAAAGCGACGCGCGTGGTTGATAAAACGTTACCGTTTTTG 926
||||||| || ||||| | |||| ||||||| || |||||||||||||| |||||| ||
Sbjct 1141 GATTGAGACGTGTGGTGGCTAAAA-CGACGCGAGTAGTTGATAAAACGTTGCCGTTTCTG 1199
Query 927 AAAATTCCGTCGATTCCGGCAGTTTTCCG-GTCGTTTGGACTGCATTTTATGTACGGCAT 985
||| | || ||||| ||| | ||||| || | |||||||| ||||||||||| || ||
Sbjct 1200 AAACTACCTTCGATACCGTCCGTTTT-CGAACCTTTTGGACTTCATTTTATGTATGGAAT 1258
Query 986 CGGCGGAGAAGGACCACGCGCGGAGAAAATGGTGAAGGCGTTGTGTGGTCATGCGCATAA 1045
||| |||||||| |||||||||| ||| |||||||| | ||||||| ||| ||||||||
Sbjct 1259 CGGAGGAGAAGGTCCACGCGCGGTGAAGATGGTGAAATCCTTGTGTGCTCACGCGCATAA 1318
Query 1046 TTTGGCAAAGGAAGGAGGATGCGGCGTCGTGGCGGCGGAAGTAGCCGGAGGAGAGCCGCT 1105
||||| |||| ||| || || || ||||||||||||||||| ||||||| ||| ||| |
Sbjct 1319 CTTGGCTAAGGCAGGTGGTTGTGGTGTCGTGGCGGCGGAAGTTGCCGGAGAAGACCCGTT 1378
Query 1106 CCGGCGAGGAATACCACATTGGAAAGTGCTATCGTGCGCCGAGGAT-TTGTGGTGTATTA 1164
||||||||||||||||||||||||||||||||||| | ||||||| || |||||||| |
Sbjct 1379 GCGGCGAGGAATACCACATTGGAAAGTGCTATCGTGTGACGAGGATCTT-TGGTGTAT-A 1436
Query 1165 AA-CGGCTTGGAGAGGATTATAGTGACGGT-TCTGTTGGTGATTGGACTAAATCGCCACC 1222
|| ||||||||||| || |||||||| ||| | |||||||||||||||||||||||||||
Sbjct 1437 AAGCGGCTTGGAGATGACTATAGTGATGGTGT-TGTTGGTGATTGGACTAAATCGCCACC 1495
Query 1223 TGGCGAATCCATTTTTGTTGACCCTAGAGAATTTTAA 1259
||||| ||||||||||| ||||||||||||||||||
Sbjct 1496 TGGCGTTTCCATTTTTGTAGACCCTAGAGAATTTTAA 1532
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62901282885
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5