BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932374
Length=1922
Score E
Sequences producing significant alignments: (Bits) Value
AT2G23760.1 | Symbols: BLH4, SAW2 | BEL1-like homeodomain 4 | c... 3049 0.0
AT4G36870.1 | Symbols: BLH2, SAW1 | BEL1-like homeodomain 2 | c... 725 0.0
AT2G27220.2 | Symbols: BLH5 | BEL1-like homeodomain 5 | chr2:11... 69.4 1e-10
> AT2G23760.1 | Symbols: BLH4, SAW2 | BEL1-like homeodomain 4 |
chr2:10107709-10112823 REVERSE LENGTH=2213
Length=2213
Score = 3049 bits (1651), Expect = 0.0
Identities = 1842/1929 (95%), Gaps = 34/1929 (2%)
Strand=Plus/Plus
Query 17 TTCTATGTCACAAGATTATCATCATCACCAAGGAATCTTTTCCTTCTCCAATGGATTCCA 76
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 111 TTCTATGTCACAAGATTATCATCATCACCAAGGAATCTTTTCCTTCTCTAATGGATTCCA 170
Query 77 TCGATCATCATCAACCACTCATCAAGAGGAAGTAGATGAATCAG-C--CGTCTCCGGTGC 133
||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct 171 CCGATCATCATCAACCACTCATCAAGAGGAAGTAGATGAATCCGCCGTCGTCTCCGGTGC 230
Query 134 TCAAATTCCGGTTTATGAAACCGCCGGAATGTTGTCTGAAATGTTTGCTTACCCTGGAGG 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 231 TCAAATTCCGGTTTATGAAACCGCCGGAATGTTGTCTGAAATGTTTGCTTACCCTGGCGG 290
Query 194 CGGTGGTGGCGGCTCCGGTGGAGAGATTCTTGATCAGTCTACTAAACAACTACTAGAGCA 253
||||| ||||| ||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 291 AGGTGGCGGCGGTTCCGGTGGAGAGATTCTTGATCAGTCTACTAAACAGTTGCTAGAGCA 350
Query 254 ACAAAACCGT--C-ACAACAAC--T--CT--ACTCTTCATATGTTACTACCAAACCATCA 304
|||||||||| | |||||||| | || ||||||||||||||| |||| || ||||
Sbjct 351 ACAAAACCGTCACAACAACAACAATAACTCAACTCTTCATATGTTATTACC-AA--ATCA 407
Query 305 TCATCAACAAGGTTTTGCTTTCACCGACGAAAACACTATGCAGCCGCAGCAACAACAACA 364
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 408 TCAT---CAAGGTTTTGCTTTCACCGACGAAAACACTATGCAGCCGCAGCAACAAC-A-A 462
Query 365 TCACTTCT-CATGGCCATC-T--TCCTCCGATCATCATCACAACCGAGATATGATCGGGA 420
||||| | |||||||||| | ||||||||||||||||| ||||||||||||||||| |
Sbjct 463 -CACTT-TACATGGCCATCTTCCTCCTCCGATCATCATCAAAACCGAGATATGATCGGAA 520
Query 421 CCGTCCACGTGGAAGGAGGAAAGGGTTTGTCTTTATCTCTCTCATCTTCATTAGCCGCAG 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 521 CCGTCCACGTGGAAGGAGGAAAGGGTTTGTCTTTATCTCTCTCATCTTCATTAGCCGCAG 580
Query 481 CTAAAGCCGAGGAATATAGAAGCATTTATTGTGCAGCCGTTGATGGAACTTCTTCTTCTT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 581 CTAAAGCCGAGGAATATAGAAGCATTTATTGTGCAGCCGTTGATGGAACTTCTTCTTCTT 640
Query 541 CTAACGCATCGGCTCATCATCACCAATTCAATCAGTTCAAGAATCTTCTTCTTGAGAATA 600
|||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 641 CTAACGCATCCGCTCATCATCATCAATTCAATCAGTTCAAGAATCTTCTTCTTGAGAATT 700
Query 601 CTTCTTCt---catcatcatcatcaagttgtgggacatttcgggtcatcatcatcatcTC 657
|||||||| |||||||| ||||||||||| |||||||| || ||||||||||||||||
Sbjct 701 CTTCTTCTCAACATCATCACCATCAAGTTGTTGGACATTTTGGTTCATCATCATCATCTC 760
Query 658 CCATGGCGGCTTCTTCATCCATTGGAGGGATCTATACGTTGAGGAATTCAAAATATACGA 717
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 761 CCATGGCGGCTTCTTCATCCATTGGAGGGATCTACACGTTGAGGAATTCGAAATATACGA 820
Query 718 AACCGGCACAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGACATTTCAAGAAGA 777
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 821 AACCGGCTCAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGACATTTCAAGAAGA 880
Query 778 ACAAACTTAGTAGGAACAACTCAAACCCTAATACTACCGGTGGAGGAGGAGGCGGCGGAT 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 881 ACAAACTTAGTAGGAACAACTCAAACCCTAATACTACCGGTGGAGGAGGAGGCGGAGGGT 940
Query 838 CGTCGTCTTCAGCCGGAACAACCAATGATAATCCTCCTTTGTCTCCGGCTGATCGGATAG 897
| ||||| || ||||||||| | ||||||| ||||||||||||||||||||||||||| |
Sbjct 941 CCTCGTCATCGGCCGGAACAGCTAATGATAGTCCTCCTTTGTCTCCGGCTGATCGGATTG 1000
Query 898 AACATCAAAGAAGAAAGGTCAAGCTACTCTCTATGCTTGAAGAGGTGGACCGACGGTACA 957
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1001 AACATCAAAGAAGAAAAGTCAAGCTACTATCTATGCTTGAAGAGGTGGACCGACGGTACA 1060
Query 958 ACCACTACTGCGAACAAATGCAAATGGTAGTGAATTCATTCGACCAAGTAATGGGTTACG 1017
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1061 ACCACTACTGCGAACAAATGCAAATGGTAGTGAACTCATTCGACCAAGTAATGGGTTACG 1120
Query 1018 GCGCGGCGGTTCCGTACACGACATTAGCTCAAAAGGCAATGTCTAGGCACTTCCGGTGTT 1077
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1121 GCGCGGCGGTTCCGTACACGACATTAGCTCAAAAGGCAATGTCTAGGCATTTCCGGTGTT 1180
Query 1078 TGAAAGACGCGGTAGCGGTTCAGCTTAAACGCAGTTGTGAGCTTCTAGGGGATAAAGAGG 1137
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1181 TGAAAGACGCGGTAGCGGTTCAGCTTAAACGCAGCTGTGAGCTTCTAGGGGATAAAGAGG 1240
Query 1138 CGGCAGGGGCTGGGTCCACGGGATTAACCAAAGGCGAAACGCCGCGATTGCGTTTGCTAG 1197
|||||||||||| ||| |||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1241 CGGCAGGGGCTGCATCCTCGGGGTTAACCAAAGGGGAAACGCCGCGATTGCGTTTGCTAG 1300
Query 1198 AGCAGAGTTTGCGTCAGCAACGAGCGTTTCATCATATGGGTATGATGGAGCAAGAGGCAT 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1301 AGCAGAGTTTGCGTCAGCAACGAGCGTTTCATCATATGGGTATGATGGAGCAAGAGGCAT 1360
Query 1258 GGAGACCGCAACGTGGTTTGCCTGAACGCTCCGTTAATATCCTTAGAGCTTGGCTTTTCG 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1361 GGAGACCGCAACGTGGTTTGCCTGAACGCTCCGTTAATATCCTTAGAGCTTGGCTATTCG 1420
Query 1318 AACATTTTCTTAATCCGTACCCAAGCGATGCTGATAAGCACCTCTTAGCACGACAGACTG 1377
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1421 AGCATTTTCTTAATCCGTACCCAAGCGATGCTGATAAGCACCTCTTAGCACGACAGACTG 1480
Query 1378 GTTTATCCAGAAATCAGGTGTCAAATTGGTTCATTAATGCTAGGGTTCGTCTATGGAAAC 1437
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1481 GTTTATCCAGAAATCAGGTGTCAAATTGGTTCATAAATGCTAGGGTTCGCCTATGGAAAC 1540
Query 1438 CAATGGTagaagagatgtatcaacaagaagcaaaagaaagagaagaagaagcagaagaaa 1497
||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1541 CAATGGTGGAAGAGATGTATCAACAAGAAGCAAAAGAAAGAGAAGAAGCAGAAGAAGAAA 1600
Query 1498 atgaaaat---caacaacaaagaagacagcaacaaacaaacaacaacgacacgaaaccca 1554
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1601 ATGAAAATCAACAACAACAAAGAAGACAGCAACAAACAAACAACAACGACACGAAACCCA 1660
Query 1555 acaacaatgaaaacaacTTCACTGTCATAACCGCACAAACTCCAACGACGATGACATCGA 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1661 ACAACAATGAAAACAACTTCACTGTCATAACCGCACAAACTCCAACGACGATGACATCGA 1720
Query 1615 CACATCACGAAAACGACTCTTCATTCCTCTCTTCCGTCGCCGCCGCTTCTCACGGCGGTT 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1721 CACATCACGAAAACGACTCTTCATTCCTCTCTTCCGTCGCCGCCGCTTCTCACGGCGGTT 1780
Query 1675 CAGACGCGTTCACCGTCGCCACGTGTCAGCAAGACGTCAGTGACTTCCACGTCGACGGAG 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1781 CAGACGCGTTCACCGTCGCCACGTGTCAGCAAGACGTCAGTGACTTCCACGTCGACGGAG 1840
Query 1735 ATGGTGTGAACGTCATAAGATTCGGGACCAAACAGACTGGTGACGTGTCTCTTACGCTTG 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1841 ATGGTGTGAACGTCATAAGATTCGGGACCAAACAGACTGGTGACGTGTCTCTTACGCTTG 1900
Query 1795 GTCTACGCCACTCTGGCAATATTCCTGATAAGAACACTTCTTTCTCCGTTAGAGACTTTG 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1901 GTCTACGCCACTCTGGCAATATTCCTGATAAGAACACTTCTTTCTCCGTTAGAGACTTTG 1960
Query 1855 GAGATTTTTAGTCTTCTTCGTTTCTCAATATATTAATCAAAAGTTTATTATAGTGAATTT 1914
|||||||||||||||||| |||||||||| |||| ||||||| |||||||||||||||||
Sbjct 1961 GAGATTTTTAGTCTTCTTTGTTTCTCAATTTATTCATCAAAA-TTTATTATAGTGAATTT 2019
Query 1915 T-TCTTTTT 1922
| | |||||
Sbjct 2020 TATTTTTTT 2028
> AT4G36870.1 | Symbols: BLH2, SAW1 | BEL1-like homeodomain 2 |
chr4:17369320-17373930 FORWARD LENGTH=2530
Length=2530
Score = 725 bits (392), Expect = 0.0
Identities = 858/1072 (80%), Gaps = 76/1072 (7%)
Strand=Plus/Plus
Query 536 TTCTTCTAACGCATCGGCTCATCATCACCAATTCAATCAGTTCAAGAATCTTCTTCTTGA 595
||||||||||||||| | | |||||| |||| |||||| |||||| | | |||||||
Sbjct 898 TTCTTCTAACGCATC-AC-C-TCATCATCAATACAATCAATTCAAG-A-C-TCTTCTT-- 949
Query 596 GAATACTTCTTCtcatcatcatcatcaagttgtggga-catttcgggtcatcatcatcat 654
| || ||||||||| ||||| ||||||| | | | || ||| | |||||| ||
Sbjct 950 G-CTAATTCTTCTCAACATCACCATCAAG-TATTAAACCAATTC-CG--ATCATC-TC-- 1001
Query 655 cTCCCATGGCGGCTTCTTCATCCATTGG-AG-GGATCTATA-CGTTGAGGAATTCAAAAT 711
| | | || |||| || |||| ||| || || || ||| | || || || || | |
Sbjct 1002 C-GGC-T-GCTTCTTCCTCTTCCA-TGGCAGCGG-TCAATATC-TTAAGAAACTCGAGGT 1055
Query 712 ATACGAAAC--CGGCACAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGACATTT 769
| || ||| | || ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1056 ACAC--AACGGCCGCGCAAGAGTTGTTGGAAGAGTTTTGTAGTGTTGGAAGAGGATTTTT 1113
Query 770 CAAGAAGAACAAACTTAGTAGGAACAACTCAAACCCTAATACTACCGGTGGAGGA-GGAG 828
||||||||||||||| | |||||| |||||||||||||||| |||||| || || |
Sbjct 1114 GAAGAAGAACAAACTT-G--GGAACAGCTCAAACCCTAATACTTGCGGTGG-TGATGGTG 1169
Query 829 GCGGCGGATCGT-CGTCTTCAGCCGGAACAACCAATGATAATCCTCCTTTGTCTCCGGCT 887
| ||| | || | | || || |||||| ||| ||| || |||||||||| || || ||
Sbjct 1170 GTGGCAGCTC-TCCTTCGTCGGCCGGAGCAAACAAGGAGCATCCTCCTTTATCGGCGTCT 1228
Query 888 GATCGGATAGAACATCAAAGAA-GAAAGGTCAAGCTACTCTCTATGCTTGAAGAGGTGGA 946
|||||||| || |||||||||| |||| || || |||||| | |||||||||||||||||
Sbjct 1229 GATCGGATTGAGCATCAAAGAAGGAAA-GTGAAACTACTCACCATGCTTGAAGAGGTGGA 1287
Query 947 CCGACGGTACAACCACTACTGCGAACAAATGCAAATGGTAGTGAATTCATTCGACCA-AG 1005
||||||||||||||| |||||||| |||||||| ||||| ||||| || ||||| || ||
Sbjct 1288 CCGACGGTACAACCATTACTGCGAGCAAATGCAGATGGTTGTGAACTCTTTCGA-CATAG 1346
Query 1006 TAATGGGTTACGGCGCGGCGGTT-CCGTACA-CGACATTAGCTCAAAAGGCAATGTCTAG 1063
||||||| |||| ||||| || ||||||| || |||| |||||||| || ||||| ||
Sbjct 1347 TAATGGGCCACGGTGCGGC-ATTACCGTACACCG-CATTGGCTCAAAAAGCTATGTCAAG 1404
Query 1064 GCACTTCCGGTG-TTTGAAAGACGCGGTAGCGGTTCAGCTTAAAC-GCAGTTGTGAGCTT 1121
|| || | || || ||||| || || |||| ||||||||| | | ||||| || |||
Sbjct 1405 ACATTTTAGATGCCTT-AAAGATGCAGTTGCGGCTCAGCTTAAGCAG-AGTTGCGAACTT 1462
Query 1122 CTAGGGGATAAAGAGGCGGCAGGG--GCTGGGTC--CACGGGATTAACCAAAGGCGAAAC 1177
|| ||||| ||||| || || ||| || || | |||| ||||| ||||| |||||
Sbjct 1463 CTTGGGGACAAAGATGCAGC-GGGAATCT-CTTCTTC-CGGG-TTAACAAAAGGTGAAAC 1518
Query 1178 GCCGCGATTGCGTTTGCTAGAGCAGAGTTTGCGTCAGCAA-CGAGCGTTTCATCATATGG 1236
||||| ||||||||||||||||| |||||||||||| || || ||||||||||| ||||
Sbjct 1519 TCCGCGTTTGCGTTTGCTAGAGCAAAGTTTGCGTCAG-AACCGTGCGTTTCATCAAATGG 1577
Query 1237 GTATGATGGAGCAAGAGGCATGGAGACCGCAACGTGGTTTGCCTGAACGCTCCGTTAATA 1296
|||||||||| ||||| || ||| | || ||||| |||||||||||||||||||| ||||
Sbjct 1578 GTATGATGGAACAAGAAGCTTGGCGGCCACAACGCGGTTTGCCTGAACGCTCCGTCAATA 1637
Query 1297 TCCTTAGAGCTTGGCTTTTCGAACATTTTCTTAATCCGTACCCAAGCGATGCTGATAAGC 1356
| |||||||||||||| ||||||||||| ||| | ||||| ||||| ||||| ||||| |
Sbjct 1638 TACTTAGAGCTTGGCTCTTCGAACATTTCCTTCACCCGTATCCAAGTGATGCAGATAAAC 1697
Query 1357 ACCTCTTAGCACGACAGACTGGTTTATCCAGAAATCAGGTGTCAAATTGGTTCATTAATG 1416
|||| || || ||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 1698 ACCTATTGGCTCGACAGACTGGTTTATCCAGAAATCAGGTATCAAATTGGTTCATAAATG 1757
Query 1417 CTAGGGTTCGTCTATGGAAACCAATGGTagaagagatgtatcaacaagaagcaaaagaaa 1476
||||||||||| |||||||||||||||| ||||| ||||| ||||||||| |||||||||
Sbjct 1758 CTAGGGTTCGTTTATGGAAACCAATGGTGGAAGAAATGTACCAACAAGAATCAAAAGAAA 1817
Query 1477 gagaa-ga-a-gaagca---gaagaaaatgaa-aa--tcaacaa-caaagaagacagcaa 1526
||||| || | || | | ||||| || ||| || |||| || |||| || |||||||
Sbjct 1818 GAGAAAGAGAAGAGGAATTAGAAGAGAACGAAGAAGATCAAGAAACAAA-AA-ACAGCAA 1875
Query 1527 caaacaaacaacaacgacacgaaacccaacaacaatgaaaacaacTTCACTG 1578
| | | | ||| | | ||| ||| ||||||||||||||| |||||||||||
Sbjct 1876 CGA-CGA-CAAGAGC-ACA--AAATCCAACAACAATGAAAGCAACTTCACTG 1922
> AT2G27220.2 | Symbols: BLH5 | BEL1-like homeodomain 5 | chr2:11637164-11639537
REVERSE LENGTH=1492
Length=1492
Score = 69.4 bits (37), Expect = 1e-10
Identities = 112/146 (77%), Gaps = 14/146 (10%)
Strand=Plus/Plus
Query 1306 CTTGGCT-TTTCGAACATTTTCTTAATCCGTACCCAAGCGATGCT-GATAA-GCACCT-C 1361
||||||| ||| || ||||||||| |||| || || || ||| | ||||| | | | |
Sbjct 788 CTTGGCTCTTT-GAGCATTTTCTTCATCCATATCCGAGGGAT-TTGGATAAGGTA-ATGC 844
Query 1362 TTAG-CACGACAGACTGG-TTTATC-CAGAAATCAGGTGTCAAATTGGTTCATTAATGCT 1418
|| | || ||||||||| ||| | || | ||||||||||||||||||||||||||||
Sbjct 845 TT-GCCA-AACAGACTGGCCTTA-CTAAG-AGTCAGGTGTCAAATTGGTTCATTAATGCT 900
Query 1419 AGGGTTCGTCTATGGAAACCAATGGT 1444
| ||||| | ||||| ||| ||||
Sbjct 901 CGAGTTCGAATGTGGAAGCCACTGGT 926
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95180233320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5