BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg932446

Length=409
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G24210.1 | Symbols: TPS10 | terpene synthase 10 | chr2:10294...   178    4e-44


> AT2G24210.1 | Symbols: TPS10 | terpene synthase 10 | chr2:10294330-10297530 
FORWARD LENGTH=1905
Length=1905

 Score =  178 bits (96),  Expect = 4e-44
 Identities = 125/139 (90%), Gaps = 2/139 (1%)
 Strand=Plus/Plus

Query  144   TGGGATGTAAATCGCCTTGATGAACTTCCCGAGTACATGAGGTTGTGTTTTCTTGTCGTG  203
             |||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||  | 
Sbjct  1081  TGGGATATAAATCGTCTTGATGAACTCCCCGAGTACATGAGGTTGTGTTTTCTTGTTATA  1140

Query  204   TACAATGAAGTCAATAGCATTGGACGTGATG-TTCTCAAAACTAAAAATATAAACATGAT  262
             |||||||||||||||||||||| | |||| | |||||| |||||||||||| ||| ||||
Sbjct  1141  TACAATGAAGTCAATAGCATTGCATGTGA-GATTCTCAGAACTAAAAATATCAACGTGAT  1199

Query  263   CCCATTCCTTAAAAAATCT  281
             ||||||||| |||||||||
Sbjct  1200  CCCATTCCTCAAAAAATCT  1218



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 19353083365


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5