BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg932451
Length=1171
Score E
Sequences producing significant alignments: (Bits) Value
AT2G24250.1 | Symbols: | Protein of unknown function (DUF295) ... 706 0.0
AT1G64840.1 | Symbols: | Protein of unknown function (DUF295) ... 558 3e-158
> AT2G24250.1 | Symbols: | Protein of unknown function (DUF295)
| chr2:10313286-10314910 REVERSE LENGTH=1335
Length=1335
Score = 706 bits (382), Expect = 0.0
Identities = 931/1181 (79%), Gaps = 97/1181 (8%)
Strand=Plus/Plus
Query 38 GAAGAAGAAGACATCAACATCATCGATAATGCCAGAATGGTCTCTTCTCCCTGAAGAGCT 97
||| ||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 69 GAAAAAGAAGATATCAACATCATCGATAATGCCAGACTGGTCTCAGCTCCCTGAAGAGCT 128
Query 98 ACTGCACATTA--TCATCG-ATAAACTTGA-CAACTGTTTCAATGTTGTTCATGCTCGGT 153
||| ||||||| ||| || || | || | ||| |||| ||| ||||||||| || |
Sbjct 129 ACTTCACATTATCTCAACGCATCTAGAGGATC-ACTATTTCGATGCTGTTCATGCCCGCT 187
Query 154 CTGTTTGCCGCTCATGGCGATCCACATTTCCATTTCCTTCTTGC-CTATTACGCCCAAGT 212
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||
Sbjct 188 CTGTTTGCCGCTCATGGCGATCCACATTTCCATTTCCTTCTT-CTCTATTACGCCAAAGT 246
Query 213 TACTCTCTTCCCA-TGTTCACTCATTTCCGTCGCAAAAGCAAAGACTTGT--T-CACCCT 268
|||||||||||| | ||| | | ||| | ||| |||||||||||| | ||||||
Sbjct 247 TACTCTCTTCCCGCT-TTC-C-C-TTTA-G----AAA-GCAAAGACTTGTGCTGCACCCT 296
Query 269 CGAGAAGATCCCTTTGTTTCTCTTTAGAGC-CTCAACTCCT---GATGCTG---ATG-TT 320
|||||| |||||||||| |||||||||| || ||||||| ||||||| ||| ||
Sbjct 297 GGAGAAGGTCCCTTTGTTCCTCTTTAGAGTTCT-AACTCCTCCTGATGCTGCTGATGCTT 355
Query 321 GCT--GAGTATTTTATGGGAGGAATAGGCCGAGATAAATCAAATGATCATATGGAGCTTC 378
|| || |||||| |||||||| |||||| |||||| |||||||||||| |||||||||
Sbjct 356 CCTCCGAATATTTTCTGGGAGGATTAGGCCAAGATAAGTCAAATGATCATGTGGAGCTTC 415
Query 379 CATCTCCCCTTCAATGTTCAGTGAAAGTGAAACTCCCAGGATCTGATCCAACCTTGATGA 438
||||||| ||||| || ||||||||||| || | |||||| |||| |||| |||||||
Sbjct 416 CATCTCCTCTTCAGTGCTCAGTGAAAGTCAATGTTCCAGGAACTGAGCCAATTTTGATGA 475
Query 439 ACATTCTCGACTACAATATCCTCCATCTGGGCTATCAGTACAGAATGAT--T-GGTTGCA 495
|||| || |||| | | ||| ||| ||||||| || |||||||| |||| | |||||||
Sbjct 476 ACATGCTTGACTGCCAGATCATCCCTCTGGGCCATAAGTACAGATTGATGATCGGTTGCA 535
Query 496 ATCCTGATGATTACAAAGGTGTGGCTTTTCTTCCGCTAAACAAAGAAGGAGGAG-AG--- 551
||||||| || |||| | || |||||||||||||||||| || ||||||||| ||
Sbjct 536 ATCCTGAAGAATACA--G-TGCAGCTTTTCTTCCGCTAAACGAACAAGGAGGAGGAGGCG 592
Query 552 --TTCGTTGTGCTTCTCAACTACTCTAGTTTTCTGTT-GGTGTTAACAAGTGCTGAAATG 608
||||||| ||| ||| ||| | || | ||| | || |||||||| |||| ||||||||
Sbjct 593 AATTCGTTGCGCTCCTCGACTGCACT-GATTTGTTTTTGGTGTTAAGAAGTACTGAAATG 651
Query 609 GGGTGGAAGCGGCTTGAGAA-CGTCCT-ATTTT-TTGCGTGCTT-GCATTTAATCACTTT 664
| |||| ||||||||||| | ||| | | || | || | | | ||| |||||||
Sbjct 652 AGATGGATTCGGCTTGAGAAAC--CCTCAACTGCTT-CATG-TAAGGAGTTATTCACTTT 707
Query 665 TAGAGGCAGATTTTATGCAACTTTTCATTCC-GGAGAAACTGTT-GTTATCGATCCTTAT 722
|||||| || || ||||||||||| | || || || || ||| ||||||||||||| |
Sbjct 708 TAGAGGAAGGTTCTATGCAACTTT-CTTTAATGGGGACAC-GTTCGTTATCGATCCTTCT 765
Query 723 TCACTGGAGGTGACTTTCCTGTTGCCCTCACCTCGGACGCCAGTACACTATCTGGTTCCA 782
|| ||||| | |||| ||| || ||| ||| || ||| || | ||||||||||
Sbjct 766 TCGCTGGAAGCGACTCCCCTAACACC-TCATATCG-ACTCCA--ACT-T-TCTGGTTCCA 819
Query 783 TTTGGTAATGATGAACTTTTCCTGGTCGAAGTAATCTTCCCAACTGTTGGTAAATTAACA 842
| ||| ||||| || ||||||||||| ||| | | | || | ||| |
Sbjct 820 TCTGGCAATGAGGAGCTTTTCCTGGTT-AAG-A--CAG---A-CT-TCC-TAAG--A--- 864
Query 843 TGTAGAGTCAGTAGGCTAGATGAGGAGGCTGGTCAATGGGTTGAGGTCAGCGATTTGGGT 902
|||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 865 TGTAGAGTAAGTAGGCTAGATGAGGAGGCTGCTGAATGGGTTGAGGTCAGCGATTTGGGA 924
Query 903 GACCGTGTATTGTTTGTCGGTGGGCACTTGGGAAATATCT-CTTGCTCGGCTCAGGAGCT 961
|||||||| |||||| | ||||| ||| |||| ||| ||| || |||| ||| |||||||
Sbjct 925 GACCGTGTTTTGTTTCTTGGTGGACACCTGGGGAATTTCTACT-GCTCCGCTAAGGAGCT 983
Query 962 TCCTCATGGTT-TGA---G--TGGGAACTCGATTTTGTTCACCAATGGGTCAGGCAATGT 1015
||||||||||| || | |||| ||||||||||||||||| ||||||| |||||||
Sbjct 984 TCCTCATGGTTGTGGTTTGACTGGGGACTCGATTTTGTTCACCGTTGGGTCACGCAATGT 1043
Query 1016 AACATT-CCCCTATAAATATGGAGTACATACAG------GAAATGCAGAAGACGATCTCG 1068
||| || ||||||||||||||||||||||||| |||| || |||||| || ||
Sbjct 1044 AAC-TTACCCCTATAAATATGGAGTACATACAAATAAAAGAAAGGCTGAAGACAATATCA 1102
Query 1069 ATTGTTGGAGATCCTCAATGGAGGACCGTGTGGTGATCCTCAACAAATCTTTTCCGGTCC 1128
|||||||||||||||||| |||| | |||||| || ||| ||||| || | ||||||||
Sbjct 1103 ATTGTTGGAGATCCTCAAGGGAGAATCGTGTGTTGTTCCGCAACAGATATGATCCGGTCC 1162
Query 1129 T-TGCTTTCAAGGTTGAATGCTAGGACGTAGATTCTCGCTT 1168
| | ||||| ||||||| |||||| || | |||||| |||
Sbjct 1163 TGT-CTTTCCGGGTTGAACGCTAGGCCGCAAATTCTCACTT 1202
> AT1G64840.1 | Symbols: | Protein of unknown function (DUF295)
| chr1:24093558-24095399 FORWARD LENGTH=1637
Length=1637
Score = 558 bits (302), Expect = 3e-158
Identities = 847/1096 (77%), Gaps = 94/1096 (9%)
Strand=Plus/Plus
Query 59 ATCGATAATGCCAGAA-TGGTCTCTTCTCCCTGAAGAGCTACTGC-ACATTATCAT-CGA 115
||| || |||||| || ||||||| ||||| ||||||||||| | || ||||| | | |
Sbjct 244 ATCCATGATGCCA-AACTGGTCTCAGCTCCCGGAAGAGCTACT-CAACCTTATC-TCCAA 300
Query 116 TAAACTTGACAACTGTTTCAATGTTGTTCATGCTCGGTCTGTTTGCCGCTCATGGCGATC 175
|| || ||||||||||| |||| ||||||||||| ||| |||| || || ||||||||
Sbjct 301 GAATCTAGACAACTGTTTTGATGTCGTTCATGCTCGATCTATTTGTCGTTCGTGGCGATC 360
Query 176 CACATTTCCATTTCCTTCTTGCCTAT-TACGCCCAAGTTACTCTCTTCCCATGTTCACTC 234
| ||||||| ||||||||| || ||| || || ||||||||||||||||| ||| ||
Sbjct 361 CGCATTTCCCTTTCCTTCTAGCTTATCAAC-CCTAAGTTACTCTCTTCCCACGTTTGCTA 419
Query 235 A-TTTCC-GTCGCAAAAGCAAAGACTTGT-TCACCCTCGAGAAGATCCCTTTGTTTCTCT 291
| || || | | |||||||||||||| | || ||| ||||||||| | || ||||
Sbjct 420 AGTTCCCATTAG--TAAGCAAAGACTTGTGT-ACACTCAAGAAGATCCAAATCTTCCTCT 476
Query 292 TTAGAGCCTC--AACTCCTGATGCTGATGTTGCTGAGTATTTTATGGGAGGAATAGGCCG 349
|||||| ||| ||| |||| ||||||| | | ||||||||| | |||||||||| ||
Sbjct 477 TTAGAG-CTCGAAAC-CCTGCTGCTGATATACCCGAGTATTTTCTTGGAGGAATAGACCA 534
Query 350 AGATAAATCAAATGATCATATGGAGCTTCCATCTCCCCTTCAATGTTCAGTGAAAGTGAA 409
|||| | ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||
Sbjct 535 AGATCAGTCAAATGATCATATGGAACTTCCATCTCCTCTTCAATGTTCTGTGAAAGTGAA 594
Query 410 ACTCCCAGGATCTGATCCAACCTTGATGAACATTCTCGACTACAATATC-CTCCATCTGG 468
||||| |||||||||| |||| ||||||| || |||||| | ||| ||| | | |
Sbjct 595 GTTCCCACAATCTGATCCATTCTTGGTGAACATGCTTGACTACCAGATCATTCC-TTTAG 653
Query 469 GCTATCAGTACAGAATGATTGGTTGCAATCCTG-ATGATT-ACAAA-GG-T--GT----G 518
||| ||| |||| |||||| ||||| |||||| || ||| |||| || | || |
Sbjct 654 GCTTTCAATACATAATGATCGGTTGGGATCCTGAATCATTGGCAAATGGTTACGTAGGCG 713
Query 519 --GCTTTTCTTCCGCTAAACAAAGAA-GGAGGAGA-G--TTCGTTGTGCTTC-TCAACTA 571
|||||||||||| |||| ||||| |||||||| | ||||||||||||| || |||
Sbjct 714 TTGCTTTTCTTCCGGTAAA-GAAGAACGGAGGAGACGAATTCGTTGTGCTTCTTC-GCTA 771
Query 572 CTC-TAGT-TTTCTGTTGGTGTTAACAAGTGCTGAAATGGGGTGGAAG-CGG-CTTGAGA 627
| | || | || |||||||||| | |||| |||||||| |||||| | || | || |
Sbjct 772 C-CGTAATCATT-TGTTGGTGTTGAGAAGTTCTGAAATGAGGTGGATGAAGGTCAAGAAA 829
Query 628 ACGTCCTATTTTTTGCGTGCTTGCATTTAATCACTTTTAGAGGCAGATTTTATGCAACTT 687
|| ||| ||| || | ||| | |||| ||| ||||||||| |||||||||| |||||
Sbjct 830 ACCTCC-ATTGCTT-CATGCAAGGGTTTAGTCAGTTTTAGAGGTAGATTTTATGTAACTT 887
Query 688 TTCATT-CCGGAGAAACTGTT--GTTATCGATCCTTATTCACTGGAGGTGACTTTCCTGT 744
||| || ||| || | | || ||| ||||||||||||| |||| |||| |||||
Sbjct 888 TTC-TTAACGGGGACA-T-TTACGTTTTCGATCCTTATTCGTTGGAACAGACTCTCCTGA 944
Query 745 TGCCCTC--A-CCTCGGACGC-C-AGTACACTATCTGGTTCCATTTGGTAATGATGAACT 799
||||||| | |||| | ||| | || | | |||||| ||||| ||| | |||||| ||
Sbjct 945 TGCCCTCAGAGCCTCTG-CGCTCGAGCA-AGTATCTGATTCCAAATGGCAGTGATGAGCT 1002
Query 800 TTTCCTGG-T-CGAAG-T-AA-TC--TTCC-CAA-C---TG--TTGG---T-A---AATT 838
|||||||| | |||| | || | |||| || | || |||| | | ||
Sbjct 1003 TTTCCTGGTTGAGAAGTTCAACCCATTTCCTGAAGCTGATGTATTGGATTTGAGTCGGTT 1062
Query 839 AACATGTAGAGTCAGTAGGCTAGATGAGGAGGCTGGTCAATGGGTTGAGGTCAGCGATTT 898
|||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1063 CGCATGTAGAGTGAGTAGGCTAGATGAGGAGGCTGGTCAATGGGTTGAGGTGATCGATTT 1122
Query 899 GGGTGACCGTGTATTGTTTGTCGGTGGGCACTTGGGAAATATCT-CTTGCTCGGCTCAGG 957
||| |||||||| |||||| | ||| ||||| |||||| ||| || |||| ||| |||
Sbjct 1123 GGGAGACCGTGTGTTGTTTAT---TGGACACTTTGGAAATGTCTGCT-GCTCAGCTAAGG 1178
Query 958 AGCTTCCTCATGGTT-TG-----AGTGGGAACTCGATTTTGTTCACCAATGGGTCAGGCA 1011
|||||||| |||||| || ||||||||||| |||||||||||||||| | |||||
Sbjct 1179 AGCTTCCTGATGGTTGTGGTGTGAGTGGGAACTCAATTTTGTTCACCAATGAGCCAGGCT 1238
Query 1012 ATGTAACATTCCCCTATAAATATGGAGTACATACAGGAAATGCAGAAGACGATCTCGAT- 1070
||||||| || |||||||||| |||||||||||||||| || |||||||| || ||
Sbjct 1239 ATGTAACGTTTGCCTATAAATACGGAGTACATACAGGAAGGGCGGAAGACGAACTTAATA 1298
Query 1071 TGTTGGAGATCCTCAA 1086
| |||||||| |||||
Sbjct 1299 T-TTGGAGATTCTCAA 1313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57479624025
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5