BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg932510 Length=1271 Score E Sequences producing significant alignments: (Bits) Value AT2G24530.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 1886 0.0 AT4G31440.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 215 9e-55 > AT2G24530.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:10421841-10424113 FORWARD LENGTH=1827 Length=1827 Score = 1886 bits (1021), Expect = 0.0 Identities = 1186/1264 (94%), Gaps = 18/1264 (1%) Strand=Plus/Plus Query 12 AGAGTAATCATGCAACGTTCTCAATATCAGAGGATTGA-TTTGTGTGAATTGAAAGAGCA 70 |||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct 302 AGAGTAATCATGCAACGTTCTCAAGATCAGAGGATT-AGCTTGTGTGAATTGAAAGAGCA 360 Query 71 TATTGTGAAGAAGATTGGTGTCGAAAGATCGACAAGGTATTTTTATTACCTAGGCAGGTT 130 |||||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||| Sbjct 361 TATTGTGAAGAAGACCGGTGTCGAAAGATCGAGAAGGTATTTCTATTATCTAGGCAGGTT 420 Query 131 TCTGAGTCAGAAGCTTACTAAGAGTGAATTTGATAAGACATGCTTGAGGTTGTTAGGGAG 190 ||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct 421 TCTAAGTCAGAAGCTTACTAAGAGTGAGTTTGATAAGACGTGTTTGAGGTTGTTAGGGAG 480 Query 191 GGAGAATCTCTCTTTACACAACCAGTTGATCCGTTCGATCTTGAGGAATGCAACTGTCGC 250 |||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| || Sbjct 481 GGAGAATCTCTCTTTACATAACCAGTTGATACGTTCGATCTTGAGGAATGCGACTGTTGC 540 Query 251 TAAGTCACCACCACCAGATCATGAAGTTGGTCATTCGACTAAACCTTTGGTGAATGCTTT 310 |||||||||||| ||||||||||||| ||||||||||||| || || ||||||||| Sbjct 541 TAAGTCACCACCTCCAGATCATGAAGCTGGTCATTCGACT-AA-----GGCGAATGCTTT 594 Query 311 TCAAAGTAGAGGAGATGGTCTTGAGCAAAGTGGATCTTTAATCCCTAATCATAATCAGCA 370 ||| ||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| Sbjct 595 TCAGAGTAGAGGAGACGGTCTTGAGCAAAGTGGAACTTTAATCCCTAATCATAGTCAGCA 654 Query 371 TGAGCCTGTTTGGTCCAACGGGGTTTTGCCCATCTCTCCGCGGAAAGTTAGGTCTGGAAT 430 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 655 TGAGCCTGTTTGGTCTAACGGGGTTTTGCCTATCTCTCCGCGGAAAGTTAGGTCTGGAAT 714 Query 431 GCGTG-ACAGGAAGAGCAGAGATAGGCCTAGTCCACTAGGGTCAAACGGGAAGGTTGAAC 489 || | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 715 GC-AGAACAGGAAGAGCAGAGATAGGCCTAGTCCACTAGGGTCAAATGGGAAGGTTGAAC 773 Query 490 ATATGTTGCATCAGCCAGTTTGTAGAGAAGACAATAGAGGTAGTGTTGGTATGGAAAATG 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 774 ATATGTTGCATCAGCCAGTTTGTAGAGAAGACAATAGAGGTAGTGTTGGTATGGAAAATG 833 Query 550 GGGATTATCAAAGATCAGGCAGATATGTTGCTGATGAAAGAGATGGTGAATTTCTTCGTC 609 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 834 GGGATTATCAAAGATCAGGCAGATATGTTGCTGATGAAAAAGATGGTGAGTTTCTTCGTC 893 Query 610 CCGTGGAAAAACCAAGAATACTAAATAAGGAAAAGGTTGCAACTGCGTCTATGAGAGATG 669 ||||||||||||| ||||||| ||||||||||||| ||||| ||| |||||||||||||| Sbjct 894 CCGTGGAAAAACCGAGAATACCAAATAAGGAAAAGATTGCAGCTGTGTCTATGAGAGATG 953 Query 670 ATGAGAATCAAGAAGAGCAGGCTAG-GCTAAATTTATCAATGAGTCCCCTTATTGCACCT 728 || |||||||||||||||||||||| | ||||| ||||||||||||| |||||||||||| Sbjct 954 ATCAGAATCAAGAAGAGCAGGCTAGAG-TAAATCTATCAATGAGTCCTCTTATTGCACCT 1012 Query 729 CTAGGGATTCCATTTTGTTCAGCTAGTGTCGGTGGGTCCCGTAGAACGGTTCCTGTTTCA 788 |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct 1013 CTAGGGATTCCATTTTGTTCAGCTAGTGTCGGTGGGTCCCCTAGAACGATACCTGTTTCA 1072 Query 789 ACCAGCGCTGAGCTAATTAGTTGCTATGACAGTGGTGGATTACCCGATATAGAGATGCTA 848 |||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1073 ACCAACGCTGAGTTAATTAGTTGCTATGACAGTGGTGGATTACCTGATATAGAGATGCTG 1132 Query 849 AGGAAAAGGATGGAGAATATTGCAGTAGCACAGGGTCTTGAAGGGGTTTCGGTGGAGTGT 908 |||||||| |||||||||||||| |||||||||||||||||||| |||||| |||||||| Sbjct 1133 AGGAAAAGAATGGAGAATATTGCTGTAGCACAGGGTCTTGAAGGTGTTTCGATGGAGTGT 1192 Query 909 GCTAAGACGTTGAATAACATGTTGGATGTGTATCTGAAGAAGCTGATCAAATCGTGCTTT 968 ||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct 1193 GCTAAGACGTTGAATAACATGTTGGATGTATATCTGAAGAAGCTGATCAATTCTTGCTTT 1252 Query 969 GATTTGGTTGGAGCCCGGTCCACTAATGGAGATCCTGGGAAACAAAC-TATAGGCAAGCA 1027 ||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||| Sbjct 1253 GATTTGGTTGGAGCCCGGTCCACAAATGGAGATCCTGGGAAACAA-CGTATAGGCAAGCA 1311 Query 1028 GCAGAGTCAAAACAAGATTGTAAATGGGGTGTGGCCAAGTAACAGTTTGAAAATAGAAAC 1087 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 1312 GCAGAGTCAAAACAAGATTGTAAATGGGGTGTGGCCAACTAACAGTTTGAAAATACAAAC 1371 Query 1088 TCCCAATGGGCCTTCTGATATAACACAAGATCATCATTCTGTGTCTCTGCTTGATTTTAG 1147 ||| |||||| |||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 1372 TCCTAATGGGTCTTCTGATATAAGACAAGATCATCATTCTGTGTCTATGCTTGATTTTAG 1431 Query 1148 AACTGCCATGGAGTTAAATCCACAGC-AGCTTGGCGAAGACTGGCCAACTCTCCGAGAGA 1206 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1432 AACTGCCATGGAGTTAAATCCAC-GCCAGCTTGGCGAAGACTGGCCAACTCTCCGAGAGA 1490 Query 1207 GAATTTCCAT-GCGGTCTTTCGAGGAACAAGACTTCGAGGTGTGAAAGACATCTTCCGCA 1265 ||||||| || |||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 1491 GAATTTC-ATTGCGGTCTTTCGAGGAACAAGACTTTGAGGTGTGAAAGACATCTTGAGCA 1549 Query 1266 TGCT 1269 |||| Sbjct 1550 TGCT 1553 > AT4G31440.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24530.1); Has 210 Blast hits to 209 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 2; Fungi - 6; Plants - 128; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:15253731-15254870 FORWARD LENGTH=1140 Length=1140 Score = 215 bits (116), Expect = 9e-55 Identities = 210/255 (82%), Gaps = 8/255 (3%) Strand=Plus/Plus Query 21 ATGCAACGTTC-TCAATATCAGAGGATTGAT-TTGTGTGAATTGAAAGAGCATATTGTGA 78 |||||||| || |||| ||| ||||||||| | | ||| | |||| |||||| |||| Sbjct 1 ATGCAACG-TCTTCAAGATCCCAGGATTGATCTAG-CTGAGCTAAAAGTGCATATAGTGA 58 Query 79 AGAAGATTGGTGTCGAAAGATCGACAAGGTATTTTTATTACCTAGGCAGGTTTCTGAGTC 138 ||||| |||| || |||||||| |||||||||||||| ||| | |||||||||||||||| Sbjct 59 AGAAGGTTGGGGTTGAAAGATCTACAAGGTATTTTTACTACTTGGGCAGGTTTCTGAGTC 118 Query 139 AGAAGCTTACTAAGAGTGAATTTGATAAGACATGCTTGAGG-TTGTTAGGGAGGGAGAAT 197 ||||||||||||||||||| ||||||||| |||| || | || || ||||| |||||| Sbjct 119 AGAAGCTTACTAAGAGTGAGTTTGATAAGTCATGTTTCCGTCTT-TTGGGGAGAGAGAAT 177 Query 198 CTCTCT-TTACACAACCAGTTGATCCGTTCGATCTTGAGGAATGCAACTGTCGCTAAGTC 256 || ||| || ||||| ||||||| ||||| |||||||| |||||| || | |||||||| Sbjct 178 CTTTCTCTT-CACAATAAGTTGATTCGTTCCATCTTGAGAAATGCATCTCTGGCTAAGTC 236 Query 257 ACCACCACCAGATCA 271 |||||| ||| ||| Sbjct 237 CCCACCATCAGTTCA 251 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62499678525 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5